RNA–Protein interactions for RNA: ENST00000560663.5

MIR9-3HG-210, Transcript of MIR9-3 host gene, humanhuman

TSL 4

Gene MIR9-3HG, Length 576 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR9-3HG-210ENST00000560663 SHROOM2Q13796 1616 aa28.51■■■□□ 2.15
MIR9-3HG-210ENST00000560663 ERCC6L2Q5T890 1561 aa28.5■■■□□ 2.15
MIR9-3HG-210ENST00000560663 KIAA0586Q9BVV6 1533 aa28.5■■■□□ 2.15
MIR9-3HG-210ENST00000560663 JPH4Q96JJ6 628 aa28.49■■■□□ 2.15
MIR9-3HG-210ENST00000560663 CSRNP3Q8WYN3 585 aa28.48■■■□□ 2.15
MIR9-3HG-210ENST00000560663 CYB5RLQ6IPT4 315 aa28.46■■■□□ 2.15
MIR9-3HG-210ENST00000560663 EEA1Q15075 1411 aa28.45■■■□□ 2.15
MIR9-3HG-210ENST00000560663 PRG4Q92954 1404 aaPredicted RBP28.42■■■□□ 2.14
MIR9-3HG-210ENST00000560663 FAM9AQ8IZU1 332 aaPredicted RBP28.4■■■□□ 2.14
MIR9-3HG-210ENST00000560663 IQGAP2Q13576 1575 aa28.28■■■□□ 2.12
MIR9-3HG-210ENST00000560663 DISP1Q96F81 1524 aa28.2■■■□□ 2.1
MIR9-3HG-210ENST00000560663 UGGT2Q9NYU1 1516 aa28.2■■■□□ 2.1
MIR9-3HG-210ENST00000560663 KIF21BO75037 1637 aa28.15■■■□□ 2.1
MIR9-3HG-210ENST00000560663 CARMIL2Q6F5E8 1435 aa28.12■■■□□ 2.09
MIR9-3HG-210ENST00000560663 CTTNBP2Q8WZ74 1663 aa28.11■■■□□ 2.09
MIR9-3HG-210ENST00000560663 TNIKQ9UKE5 1360 aa28.1■■■□□ 2.09
MIR9-3HG-210ENST00000560663 PTPRGP23470 1445 aa28.07■■■□□ 2.08
MIR9-3HG-210ENST00000560663 KIAA0556O60303 1618 aa28.05■■■□□ 2.08
MIR9-3HG-210ENST00000560663 EHMT2Q96KQ7 1210 aa28.02■■■□□ 2.08
MIR9-3HG-210ENST00000560663 GOLGA3Q08378 1498 aa28.01■■■□□ 2.07
MIR9-3HG-210ENST00000560663 TTBK1Q5TCY1 1321 aaPredicted RBP27.99■■■□□ 2.07
MIR9-3HG-210ENST00000560663 ADCY10Q96PN6 1610 aa27.95■■■□□ 2.06
MIR9-3HG-210ENST00000560663 UBTFP17480 764 aaKnown RBP27.91■■■□□ 2.06
MIR9-3HG-210ENST00000560663 SAMD9Q5K651 1589 aa27.9■■■□□ 2.06
MIR9-3HG-210ENST00000560663 P3H3Q8IVL6 736 aa27.9■■■□□ 2.06
MIR9-3HG-210ENST00000560663 UACAQ9BZF9 1416 aa27.89■■■□□ 2.06
MIR9-3HG-210ENST00000560663 RANGAP1P46060 587 aaPredicted RBP27.87■■■□□ 2.05
MIR9-3HG-210ENST00000560663 UHRF1BP1LA0JNW5 1464 aa27.87■■■□□ 2.05
MIR9-3HG-210ENST00000560663 PLB1Q6P1J6 1458 aa27.83■■■□□ 2.05
MIR9-3HG-210ENST00000560663 ABCC2Q92887 1545 aa27.82■■■□□ 2.04
MIR9-3HG-210ENST00000560663 FHOD3Q2V2M9 1422 aa27.79■■■□□ 2.04
MIR9-3HG-210ENST00000560663 ABCA8O94911 1581 aa27.78■■■□□ 2.04
MIR9-3HG-210ENST00000560663 TRHP20396 242 aaPredicted RBP27.78■■■□□ 2.04
MIR9-3HG-210ENST00000560663 NPM1P06748 294 aaKnown RBP eCLIP27.77■■■□□ 2.04
MIR9-3HG-210ENST00000560663 EFCAB5A4FU69 1503 aa27.75■■■□□ 2.03
MIR9-3HG-210ENST00000560663 MAPKBP1O60336 1514 aa27.75■■■□□ 2.03
MIR9-3HG-210ENST00000560663 KDM5BQ9UGL1 1544 aa27.74■■■□□ 2.03
MIR9-3HG-210ENST00000560663 ARHGAP35Q9NRY4 1499 aa27.72■■■□□ 2.03
MIR9-3HG-210ENST00000560663 ABCC10Q5T3U5 1492 aa27.64■■■□□ 2.02
MIR9-3HG-210ENST00000560663 ASXL2Q76L83 1435 aa27.64■■■□□ 2.02
MIR9-3HG-210ENST00000560663 LOC105371045A0A1W2PR82 267 aa27.61■■■□□ 2.01
MIR9-3HG-210ENST00000560663 ZCCHC11Q5TAX3 1644 aaKnown RBP27.6■■■□□ 2.01
MIR9-3HG-210ENST00000560663 ATP10BO94823 1461 aa27.58■■■□□ 2.01
MIR9-3HG-210ENST00000560663 ARID3CA6NKF2 412 aa27.58■■■□□ 2.01
MIR9-3HG-210ENST00000560663 FAM69CQ0P6D2 419 aa27.58■■■□□ 2.01
MIR9-3HG-210ENST00000560663 NUP153P49790 1475 aaKnown RBP27.57■■■□□ 2
MIR9-3HG-210ENST00000560663 RAPGEF6Q8TEU7 1601 aa27.57■■■□□ 2
MIR9-3HG-210ENST00000560663 DIP2BQ9P265 1576 aa27.56■■■□□ 2
MIR9-3HG-210ENST00000560663 CLIP1P30622 1438 aa27.53■■■□□ 2
MIR9-3HG-210ENST00000560663 KIF13AQ9H1H9 1805 aa27.52■■■□□ 2
MIR9-3HG-210ENST00000560663 FMN1Q68DA7 1419 aa27.5■■□□□ 1.99
MIR9-3HG-210ENST00000560663 EPRSP07814 1512 aaKnown RBP27.49■■□□□ 1.99
MIR9-3HG-210ENST00000560663 WDR7Q9Y4E6 1490 aa27.48■■□□□ 1.99
MIR9-3HG-210ENST00000560663 CEP162Q5TB80 1403 aa27.44■■□□□ 1.98
MIR9-3HG-210ENST00000560663 GLI2P10070 1586 aa27.43■■□□□ 1.98
MIR9-3HG-210ENST00000560663 CDK13Q14004 1512 aaKnown RBP27.36■■□□□ 1.97
MIR9-3HG-210ENST00000560663 KCNH8Q96L42 1107 aa27.36■■□□□ 1.97
MIR9-3HG-210ENST00000560663 CASKIN1Q8WXD9 1431 aa27.35■■□□□ 1.97
MIR9-3HG-210ENST00000560663 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.35■■□□□ 1.97
MIR9-3HG-210ENST00000560663 HNRNPUL2Q1KMD3 747 aaKnown RBP27.35■■□□□ 1.97
MIR9-3HG-210ENST00000560663 ATP1B4Q9UN42 357 aaPredicted RBP27.32■■□□□ 1.96
MIR9-3HG-210ENST00000560663 PCF11O94913 1555 aaKnown RBP27.31■■□□□ 1.96
MIR9-3HG-210ENST00000560663 HECW1Q76N89 1606 aa27.31■■□□□ 1.96
MIR9-3HG-210ENST00000560663 MAP3K4Q9Y6R4 1608 aa27.27■■□□□ 1.96
MIR9-3HG-210ENST00000560663 PPRC1Q5VV67 1664 aaKnown RBP27.27■■□□□ 1.96
MIR9-3HG-210ENST00000560663 PLEKHD1A6NEE1 506 aa27.26■■□□□ 1.95
MIR9-3HG-210ENST00000560663 FYCO1Q9BQS8 1478 aa27.24■■□□□ 1.95
MIR9-3HG-210ENST00000560663 CD109Q6YHK3 1445 aa27.23■■□□□ 1.95
MIR9-3HG-210ENST00000560663 LRRIQ1Q96JM4 1722 aa27.22■■□□□ 1.95
MIR9-3HG-210ENST00000560663 TSPOAP1O95153 1857 aa27.19■■□□□ 1.94
MIR9-3HG-210ENST00000560663 MAGI3Q5TCQ9 1506 aa27.19■■□□□ 1.94
MIR9-3HG-210ENST00000560663 ABCA9Q8IUA7 1624 aa27.18■■□□□ 1.94
MIR9-3HG-210ENST00000560663 CCDC18Q5T9S5 1454 aa27.16■■□□□ 1.94
MIR9-3HG-210ENST00000560663 CFAP43Q8NDM7 1665 aa27.15■■□□□ 1.94
MIR9-3HG-210ENST00000560663 TROQ12816 1431 aaPredicted RBP27.14■■□□□ 1.93
MIR9-3HG-210ENST00000560663 COL17A1Q9UMD9 1497 aaPredicted RBP27.13■■□□□ 1.93
MIR9-3HG-210ENST00000560663 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.12■■□□□ 1.93
MIR9-3HG-210ENST00000560663 CDK11AQ9UQ88 783 aaPredicted RBP27.12■■□□□ 1.93
MIR9-3HG-210ENST00000560663 TEX14Q8IWB6 1497 aa27.12■■□□□ 1.93
MIR9-3HG-210ENST00000560663 VPS8Q8N3P4 1428 aa27.1■■□□□ 1.93
MIR9-3HG-210ENST00000560663 TTC37Q6PGP7 1564 aa27.07■■□□□ 1.92
MIR9-3HG-210ENST00000560663 KIF14Q15058 1648 aa27.05■■□□□ 1.92
MIR9-3HG-210ENST00000560663 KDM6BO15054 1643 aa27.04■■□□□ 1.92
MIR9-3HG-210ENST00000560663 PLCH2O75038 1416 aa26.99■■□□□ 1.91
MIR9-3HG-210ENST00000560663 NEO1Q92859 1461 aa26.96■■□□□ 1.91
MIR9-3HG-210ENST00000560663 ARAP3Q8WWN8 1544 aa26.94■■□□□ 1.9
MIR9-3HG-210ENST00000560663 PHLDB1Q86UU1 1377 aa26.93■■□□□ 1.9
MIR9-3HG-210ENST00000560663 FANCAO15360 1455 aa26.93■■□□□ 1.9
MIR9-3HG-210ENST00000560663 MTUS2Q5JR59 1369 aa26.9■■□□□ 1.9
MIR9-3HG-210ENST00000560663 AKNAQ7Z591 1439 aa26.9■■□□□ 1.9
MIR9-3HG-210ENST00000560663 TIAM1Q13009 1591 aa26.88■■□□□ 1.89
MIR9-3HG-210ENST00000560663 RAPGEF3O95398 923 aa26.85■■□□□ 1.89
MIR9-3HG-210ENST00000560663 EHBP1L1Q8N3D4 1523 aa26.85■■□□□ 1.89
MIR9-3HG-210ENST00000560663 KANK4Q5T7N3 995 aaPredicted RBP26.84■■□□□ 1.89
MIR9-3HG-210ENST00000560663 MAP3K1Q13233 1512 aa26.84■■□□□ 1.89
MIR9-3HG-210ENST00000560663 EFCAB2Q5VUJ9 269 aa26.83■■□□□ 1.89
MIR9-3HG-210ENST00000560663 GPATCH8Q9UKJ3 1502 aaKnown RBP26.83■■□□□ 1.89
MIR9-3HG-210ENST00000560663 LRRC9Q6ZRR7 1453 aa26.81■■□□□ 1.88
MIR9-3HG-210ENST00000560663 AEBP2Q6ZN18 517 aaPredicted RBP26.81■■□□□ 1.88
MIR9-3HG-210ENST00000560663 MYO5CQ9NQX4 1742 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms