RNA–Protein interactions for RNA: ENST00000560496.5

SNRPA1-212, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-212ENST00000560496 TRHP20396 242 aaPredicted RBP17.97■□□□□ 0.47
SNRPA1-212ENST00000560496 KIF13AQ9H1H9 1805 aa17.93■□□□□ 0.46
SNRPA1-212ENST00000560496 PRG4Q92954 1404 aaPredicted RBP17.92■□□□□ 0.46
SNRPA1-212ENST00000560496 KIF27Q86VH2 1401 aa17.91■□□□□ 0.46
SNRPA1-212ENST00000560496 PHF23Q9BUL5 403 aaPredicted RBP17.89■□□□□ 0.45
SNRPA1-212ENST00000560496 IGF1RP08069 1367 aa17.88■□□□□ 0.45
SNRPA1-212ENST00000560496 ADCY10Q96PN6 1610 aa17.87■□□□□ 0.45
SNRPA1-212ENST00000560496 KIAA0586Q9BVV6 1533 aa17.87■□□□□ 0.45
SNRPA1-212ENST00000560496 JPH4Q96JJ6 628 aa17.82■□□□□ 0.44
SNRPA1-212ENST00000560496 MAPKBP1O60336 1514 aa17.81■□□□□ 0.44
SNRPA1-212ENST00000560496 IQGAP2Q13576 1575 aa17.79■□□□□ 0.44
SNRPA1-212ENST00000560496 DIP2BQ9P265 1576 aa17.78■□□□□ 0.44
SNRPA1-212ENST00000560496 CARMIL1Q5VZK9 1371 aa17.76■□□□□ 0.43
SNRPA1-212ENST00000560496 CTTNBP2Q8WZ74 1663 aa17.71■□□□□ 0.43
SNRPA1-212ENST00000560496 ABCC10Q5T3U5 1492 aa17.71■□□□□ 0.43
SNRPA1-212ENST00000560496 DISP1Q96F81 1524 aa17.67■□□□□ 0.42
SNRPA1-212ENST00000560496 KIAA0556O60303 1618 aa17.66■□□□□ 0.42
SNRPA1-212ENST00000560496 RAPGEF2Q9Y4G8 1499 aa17.66■□□□□ 0.42
SNRPA1-212ENST00000560496 UGGT2Q9NYU1 1516 aa17.66■□□□□ 0.42
SNRPA1-212ENST00000560496 TNIKQ9UKE5 1360 aa17.62■□□□□ 0.41
SNRPA1-212ENST00000560496 CARMIL2Q6F5E8 1435 aa17.62■□□□□ 0.41
SNRPA1-212ENST00000560496 ABCC2Q92887 1545 aa17.62■□□□□ 0.41
SNRPA1-212ENST00000560496 PTPRGP23470 1445 aa17.6■□□□□ 0.41
SNRPA1-212ENST00000560496 TSPOAP1O95153 1857 aa17.6■□□□□ 0.41
SNRPA1-212ENST00000560496 PPRC1Q5VV67 1664 aaKnown RBP17.59■□□□□ 0.41
SNRPA1-212ENST00000560496 UHRF1BP1LA0JNW5 1464 aa17.59■□□□□ 0.41
SNRPA1-212ENST00000560496 ZCCHC11Q5TAX3 1644 aaKnown RBP17.57■□□□□ 0.4
SNRPA1-212ENST00000560496 KDM6BO15054 1643 aa17.56■□□□□ 0.4
SNRPA1-212ENST00000560496 PRXQ9BXM0 1461 aa17.54■□□□□ 0.4
SNRPA1-212ENST00000560496 GLI2P10070 1586 aa17.53■□□□□ 0.4
SNRPA1-212ENST00000560496 NPM1P06748 294 aaKnown RBP eCLIP17.53■□□□□ 0.4
SNRPA1-212ENST00000560496 FAM69CQ0P6D2 419 aa17.53■□□□□ 0.4
SNRPA1-212ENST00000560496 UACAQ9BZF9 1416 aa17.53■□□□□ 0.4
SNRPA1-212ENST00000560496 KDM5BQ9UGL1 1544 aa17.52■□□□□ 0.4
SNRPA1-212ENST00000560496 ASXL2Q76L83 1435 aa17.51■□□□□ 0.39
SNRPA1-212ENST00000560496 MAP3K4Q9Y6R4 1608 aa17.5■□□□□ 0.39
SNRPA1-212ENST00000560496 PLB1Q6P1J6 1458 aa17.49■□□□□ 0.39
SNRPA1-212ENST00000560496 ABCA8O94911 1581 aa17.47■□□□□ 0.39
SNRPA1-212ENST00000560496 TTBK1Q5TCY1 1321 aaPredicted RBP17.47■□□□□ 0.39
SNRPA1-212ENST00000560496 EPRSP07814 1512 aaKnown RBP17.44■□□□□ 0.38
SNRPA1-212ENST00000560496 GOLGA3Q08378 1498 aa17.44■□□□□ 0.38
SNRPA1-212ENST00000560496 SAMD9Q5K651 1589 aa17.41■□□□□ 0.38
SNRPA1-212ENST00000560496 WDR7Q9Y4E6 1490 aa17.38■□□□□ 0.37
SNRPA1-212ENST00000560496 CFAP43Q8NDM7 1665 aa17.37■□□□□ 0.37
SNRPA1-212ENST00000560496 TEX14Q8IWB6 1497 aa17.31■□□□□ 0.36
SNRPA1-212ENST00000560496 COL17A1Q9UMD9 1497 aaPredicted RBP17.31■□□□□ 0.36
SNRPA1-212ENST00000560496 EEA1Q15075 1411 aa17.3■□□□□ 0.36
SNRPA1-212ENST00000560496 RAPGEF6Q8TEU7 1601 aa17.3■□□□□ 0.36
SNRPA1-212ENST00000560496 KIF21BO75037 1637 aa17.29■□□□□ 0.36
SNRPA1-212ENST00000560496 MAGI3Q5TCQ9 1506 aa17.26■□□□□ 0.35
SNRPA1-212ENST00000560496 ABCA9Q8IUA7 1624 aa17.24■□□□□ 0.35
SNRPA1-212ENST00000560496 CSRNP3Q8WYN3 585 aa17.23■□□□□ 0.35
SNRPA1-212ENST00000560496 ATP10BO94823 1461 aa17.22■□□□□ 0.35
SNRPA1-212ENST00000560496 EFCAB5A4FU69 1503 aa17.2■□□□□ 0.34
SNRPA1-212ENST00000560496 ADGRL1O94910 1474 aa17.19■□□□□ 0.34
SNRPA1-212ENST00000560496 KDM4FA0A1W2PPD8 638 aa17.19■□□□□ 0.34
SNRPA1-212ENST00000560496 CD109Q6YHK3 1445 aa17.19■□□□□ 0.34
SNRPA1-212ENST00000560496 NUP153P49790 1475 aaKnown RBP17.18■□□□□ 0.34
SNRPA1-212ENST00000560496 FHOD3Q2V2M9 1422 aa17.17■□□□□ 0.34
SNRPA1-212ENST00000560496 P3H3Q8IVL6 736 aa17.15■□□□□ 0.34
SNRPA1-212ENST00000560496 FRMPD1Q5SYB0 1578 aa17.12■□□□□ 0.33
SNRPA1-212ENST00000560496 ARAP3Q8WWN8 1544 aa17.11■□□□□ 0.33
SNRPA1-212ENST00000560496 ARID3CA6NKF2 412 aa17.1■□□□□ 0.33
SNRPA1-212ENST00000560496 KCNH8Q96L42 1107 aa17.08■□□□□ 0.32
SNRPA1-212ENST00000560496 TTC37Q6PGP7 1564 aa17.07■□□□□ 0.32
SNRPA1-212ENST00000560496 FAM9AQ8IZU1 332 aaPredicted RBP17.06■□□□□ 0.32
SNRPA1-212ENST00000560496 RICTORQ6R327 1708 aa17.05■□□□□ 0.32
SNRPA1-212ENST00000560496 CFAP74Q9C0B2 1584 aa17.05■□□□□ 0.32
SNRPA1-212ENST00000560496 CDK13Q14004 1512 aaKnown RBP17.05■□□□□ 0.32
SNRPA1-212ENST00000560496 NEO1Q92859 1461 aa17.05■□□□□ 0.32
SNRPA1-212ENST00000560496 FOXD1Q16676 465 aa17.04■□□□□ 0.32
SNRPA1-212ENST00000560496 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.04■□□□□ 0.32
SNRPA1-212ENST00000560496 LRRIQ1Q96JM4 1722 aa17.04■□□□□ 0.32
SNRPA1-212ENST00000560496 HECW1Q76N89 1606 aa17.03■□□□□ 0.32
SNRPA1-212ENST00000560496 ARHGEF40Q8TER5 1519 aa17.01■□□□□ 0.31
SNRPA1-212ENST00000560496 ARHGAP35Q9NRY4 1499 aa17.01■□□□□ 0.31
SNRPA1-212ENST00000560496 RANGAP1P46060 587 aaPredicted RBP17■□□□□ 0.31
SNRPA1-212ENST00000560496 HECW2Q9P2P5 1572 aa16.99■□□□□ 0.31
SNRPA1-212ENST00000560496 ADAMTSL3P82987 1691 aa16.98■□□□□ 0.31
SNRPA1-212ENST00000560496 PHLDB1Q86UU1 1377 aa16.98■□□□□ 0.31
SNRPA1-212ENST00000560496 BCORL1Q5H9F3 1711 aa16.96■□□□□ 0.31
SNRPA1-212ENST00000560496 MYO5CQ9NQX4 1742 aa16.96■□□□□ 0.3
SNRPA1-212ENST00000560496 ZMYM4Q5VZL5 1548 aa16.96■□□□□ 0.3
SNRPA1-212ENST00000560496 SIGLEC1Q9BZZ2 1709 aa16.94■□□□□ 0.3
SNRPA1-212ENST00000560496 KIF14Q15058 1648 aa16.94■□□□□ 0.3
SNRPA1-212ENST00000560496 FMN1Q68DA7 1419 aa16.94■□□□□ 0.3
SNRPA1-212ENST00000560496 PCF11O94913 1555 aaKnown RBP16.94■□□□□ 0.3
SNRPA1-212ENST00000560496 FANCAO15360 1455 aa16.93■□□□□ 0.3
SNRPA1-212ENST00000560496 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.92■□□□□ 0.3
SNRPA1-212ENST00000560496 HNRNPUL2Q1KMD3 747 aaKnown RBP16.92■□□□□ 0.3
SNRPA1-212ENST00000560496 MADDQ8WXG6 1647 aa16.91■□□□□ 0.3
SNRPA1-212ENST00000560496 AKNAQ7Z591 1439 aa16.89■□□□□ 0.29
SNRPA1-212ENST00000560496 DENND4BO75064 1496 aaPredicted RBP16.89■□□□□ 0.29
SNRPA1-212ENST00000560496 RAPGEF3O95398 923 aa16.88■□□□□ 0.29
SNRPA1-212ENST00000560496 EHMT2Q96KQ7 1210 aa16.87■□□□□ 0.29
SNRPA1-212ENST00000560496 PLEKHD1A6NEE1 506 aa16.86■□□□□ 0.29
SNRPA1-212ENST00000560496 ZFYVE16Q7Z3T8 1539 aa16.86■□□□□ 0.29
SNRPA1-212ENST00000560496 UBTFP17480 764 aaKnown RBP16.85■□□□□ 0.29
SNRPA1-212ENST00000560496 RIMS1Q86UR5 1692 aaKnown RBP16.85■□□□□ 0.29
SNRPA1-212ENST00000560496 POGZQ7Z3K3 1410 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms