RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 KIF27Q86VH2 1401 aa26.26■■□□□ 1.79
SNRPA1-210ENST00000560383 PRG4Q92954 1404 aaPredicted RBP26.2■■□□□ 1.78
SNRPA1-210ENST00000560383 IGF1RP08069 1367 aa26.19■■□□□ 1.78
SNRPA1-210ENST00000560383 JPH4Q96JJ6 628 aa26.15■■□□□ 1.78
SNRPA1-210ENST00000560383 KIAA0586Q9BVV6 1533 aa26.13■■□□□ 1.77
SNRPA1-210ENST00000560383 CARMIL1Q5VZK9 1371 aa26.02■■□□□ 1.76
SNRPA1-210ENST00000560383 KIF13AQ9H1H9 1805 aa25.96■■□□□ 1.75
SNRPA1-210ENST00000560383 ADCY10Q96PN6 1610 aa25.95■■□□□ 1.74
SNRPA1-210ENST00000560383 MAPKBP1O60336 1514 aa25.93■■□□□ 1.74
SNRPA1-210ENST00000560383 IQGAP2Q13576 1575 aa25.92■■□□□ 1.74
SNRPA1-210ENST00000560383 CARMIL2Q6F5E8 1435 aa25.85■■□□□ 1.73
SNRPA1-210ENST00000560383 RAPGEF2Q9Y4G8 1499 aa25.85■■□□□ 1.73
SNRPA1-210ENST00000560383 ABCC10Q5T3U5 1492 aa25.84■■□□□ 1.73
SNRPA1-210ENST00000560383 NPM1P06748 294 aaKnown RBP eCLIP25.83■■□□□ 1.73
SNRPA1-210ENST00000560383 DIP2BQ9P265 1576 aa25.81■■□□□ 1.72
SNRPA1-210ENST00000560383 TNIKQ9UKE5 1360 aa25.8■■□□□ 1.72
SNRPA1-210ENST00000560383 PTPRGP23470 1445 aa25.8■■□□□ 1.72
SNRPA1-210ENST00000560383 UGGT2Q9NYU1 1516 aa25.76■■□□□ 1.71
SNRPA1-210ENST00000560383 DISP1Q96F81 1524 aa25.75■■□□□ 1.71
SNRPA1-210ENST00000560383 CTTNBP2Q8WZ74 1663 aa25.71■■□□□ 1.71
SNRPA1-210ENST00000560383 ABCC2Q92887 1545 aa25.71■■□□□ 1.71
SNRPA1-210ENST00000560383 UHRF1BP1LA0JNW5 1464 aa25.71■■□□□ 1.71
SNRPA1-210ENST00000560383 FAM69CQ0P6D2 419 aa25.69■■□□□ 1.7
SNRPA1-210ENST00000560383 KIAA0556O60303 1618 aa25.69■■□□□ 1.7
SNRPA1-210ENST00000560383 UACAQ9BZF9 1416 aa25.63■■□□□ 1.69
SNRPA1-210ENST00000560383 PRXQ9BXM0 1461 aa25.63■■□□□ 1.69
SNRPA1-210ENST00000560383 PLB1Q6P1J6 1458 aa25.6■■□□□ 1.69
SNRPA1-210ENST00000560383 KDM5BQ9UGL1 1544 aa25.58■■□□□ 1.68
SNRPA1-210ENST00000560383 TTBK1Q5TCY1 1321 aaPredicted RBP25.57■■□□□ 1.68
SNRPA1-210ENST00000560383 GLI2P10070 1586 aa25.56■■□□□ 1.68
SNRPA1-210ENST00000560383 ASXL2Q76L83 1435 aa25.56■■□□□ 1.68
SNRPA1-210ENST00000560383 GOLGA3Q08378 1498 aa25.56■■□□□ 1.68
SNRPA1-210ENST00000560383 TSPOAP1O95153 1857 aa25.55■■□□□ 1.68
SNRPA1-210ENST00000560383 KDM6BO15054 1643 aa25.53■■□□□ 1.68
SNRPA1-210ENST00000560383 EEA1Q15075 1411 aa25.53■■□□□ 1.68
SNRPA1-210ENST00000560383 ZCCHC11Q5TAX3 1644 aaKnown RBP25.52■■□□□ 1.68
SNRPA1-210ENST00000560383 CSRNP3Q8WYN3 585 aa25.51■■□□□ 1.67
SNRPA1-210ENST00000560383 PPRC1Q5VV67 1664 aaKnown RBP25.47■■□□□ 1.67
SNRPA1-210ENST00000560383 MAP3K4Q9Y6R4 1608 aa25.44■■□□□ 1.66
SNRPA1-210ENST00000560383 ABCA8O94911 1581 aa25.44■■□□□ 1.66
SNRPA1-210ENST00000560383 EPRSP07814 1512 aaKnown RBP25.43■■□□□ 1.66
SNRPA1-210ENST00000560383 WDR7Q9Y4E6 1490 aa25.38■■□□□ 1.65
SNRPA1-210ENST00000560383 SAMD9Q5K651 1589 aa25.34■■□□□ 1.65
SNRPA1-210ENST00000560383 TEX14Q8IWB6 1497 aa25.33■■□□□ 1.65
SNRPA1-210ENST00000560383 FAM9AQ8IZU1 332 aaPredicted RBP25.29■■□□□ 1.64
SNRPA1-210ENST00000560383 CFAP43Q8NDM7 1665 aa25.28■■□□□ 1.64
SNRPA1-210ENST00000560383 KIF21BO75037 1637 aa25.23■■□□□ 1.63
SNRPA1-210ENST00000560383 MAGI3Q5TCQ9 1506 aa25.21■■□□□ 1.63
SNRPA1-210ENST00000560383 COL17A1Q9UMD9 1497 aaPredicted RBP25.19■■□□□ 1.62
SNRPA1-210ENST00000560383 RAPGEF6Q8TEU7 1601 aa25.19■■□□□ 1.62
SNRPA1-210ENST00000560383 ATP10BO94823 1461 aa25.16■■□□□ 1.62
SNRPA1-210ENST00000560383 CD109Q6YHK3 1445 aa25.16■■□□□ 1.62
SNRPA1-210ENST00000560383 P3H3Q8IVL6 736 aa25.14■■□□□ 1.62
SNRPA1-210ENST00000560383 EFCAB5A4FU69 1503 aa25.12■■□□□ 1.61
SNRPA1-210ENST00000560383 KDM4FA0A1W2PPD8 638 aa25.1■■□□□ 1.61
SNRPA1-210ENST00000560383 ABCA9Q8IUA7 1624 aa25.09■■□□□ 1.61
SNRPA1-210ENST00000560383 KCNH8Q96L42 1107 aa25.08■■□□□ 1.61
SNRPA1-210ENST00000560383 NUP153P49790 1475 aaKnown RBP25.06■■□□□ 1.6
SNRPA1-210ENST00000560383 FHOD3Q2V2M9 1422 aa25.05■■□□□ 1.6
SNRPA1-210ENST00000560383 ADGRL1O94910 1474 aa25.02■■□□□ 1.6
SNRPA1-210ENST00000560383 ARAP3Q8WWN8 1544 aa25.01■■□□□ 1.59
SNRPA1-210ENST00000560383 ARID3CA6NKF2 412 aa25■■□□□ 1.59
SNRPA1-210ENST00000560383 UBTFP17480 764 aaKnown RBP24.99■■□□□ 1.59
SNRPA1-210ENST00000560383 PHLDB1Q86UU1 1377 aa24.97■■□□□ 1.59
SNRPA1-210ENST00000560383 RANGAP1P46060 587 aaPredicted RBP24.95■■□□□ 1.58
SNRPA1-210ENST00000560383 NEO1Q92859 1461 aa24.93■■□□□ 1.58
SNRPA1-210ENST00000560383 EHMT2Q96KQ7 1210 aa24.91■■□□□ 1.58
SNRPA1-210ENST00000560383 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.89■■□□□ 1.58
SNRPA1-210ENST00000560383 HNRNPUL2Q1KMD3 747 aaKnown RBP24.89■■□□□ 1.58
SNRPA1-210ENST00000560383 FMN1Q68DA7 1419 aa24.85■■□□□ 1.57
SNRPA1-210ENST00000560383 CFAP74Q9C0B2 1584 aa24.84■■□□□ 1.57
SNRPA1-210ENST00000560383 ARHGAP35Q9NRY4 1499 aa24.84■■□□□ 1.57
SNRPA1-210ENST00000560383 PLEKHD1A6NEE1 506 aa24.84■■□□□ 1.57
SNRPA1-210ENST00000560383 HECW1Q76N89 1606 aa24.83■■□□□ 1.57
SNRPA1-210ENST00000560383 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.81■■□□□ 1.56
SNRPA1-210ENST00000560383 FRMPD1Q5SYB0 1578 aa24.81■■□□□ 1.56
SNRPA1-210ENST00000560383 CDK13Q14004 1512 aaKnown RBP24.81■■□□□ 1.56
SNRPA1-210ENST00000560383 TTC37Q6PGP7 1564 aa24.8■■□□□ 1.56
SNRPA1-210ENST00000560383 RICTORQ6R327 1708 aa24.75■■□□□ 1.55
SNRPA1-210ENST00000560383 FANCAO15360 1455 aa24.75■■□□□ 1.55
SNRPA1-210ENST00000560383 RAPGEF3O95398 923 aa24.71■■□□□ 1.55
SNRPA1-210ENST00000560383 ARHGEF40Q8TER5 1519 aa24.71■■□□□ 1.55
SNRPA1-210ENST00000560383 DENND4BO75064 1496 aaPredicted RBP24.7■■□□□ 1.55
SNRPA1-210ENST00000560383 AKNAQ7Z591 1439 aa24.7■■□□□ 1.55
SNRPA1-210ENST00000560383 ZMYM4Q5VZL5 1548 aa24.68■■□□□ 1.54
SNRPA1-210ENST00000560383 ADAMTSL3P82987 1691 aa24.67■■□□□ 1.54
SNRPA1-210ENST00000560383 MYO5CQ9NQX4 1742 aa24.66■■□□□ 1.54
SNRPA1-210ENST00000560383 LRRIQ1Q96JM4 1722 aa24.66■■□□□ 1.54
SNRPA1-210ENST00000560383 KIF14Q15058 1648 aa24.65■■□□□ 1.54
SNRPA1-210ENST00000560383 HECW2Q9P2P5 1572 aa24.64■■□□□ 1.54
SNRPA1-210ENST00000560383 PLCH2O75038 1416 aa24.64■■□□□ 1.54
SNRPA1-210ENST00000560383 BCORL1Q5H9F3 1711 aa24.64■■□□□ 1.53
SNRPA1-210ENST00000560383 CDK11AQ9UQ88 783 aaPredicted RBP24.63■■□□□ 1.53
SNRPA1-210ENST00000560383 CLIP1P30622 1438 aa24.61■■□□□ 1.53
SNRPA1-210ENST00000560383 TROQ12816 1431 aaPredicted RBP24.61■■□□□ 1.53
SNRPA1-210ENST00000560383 MAGI2Q86UL8 1455 aa24.6■■□□□ 1.53
SNRPA1-210ENST00000560383 PCF11O94913 1555 aaKnown RBP24.59■■□□□ 1.53
SNRPA1-210ENST00000560383 CCDC18Q5T9S5 1454 aa24.58■■□□□ 1.53
SNRPA1-210ENST00000560383 ATP1B4Q9UN42 357 aaPredicted RBP24.58■■□□□ 1.53
SNRPA1-210ENST00000560383 CASKIN1Q8WXD9 1431 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms