RNA–Protein interactions for RNA: ENST00000560309.5

ETFA-213, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 3

Gene ETFA, Length 633 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-213ENST00000560309 CUL7Q14999 1698 aa35.67■■■■□ 3.3
ETFA-213ENST00000560309 RUSC2Q8N2Y8 1516 aa35.6■■■■□ 3.29
ETFA-213ENST00000560309 KIAA0586Q9BVV6 1533 aa35.58■■■■□ 3.29
ETFA-213ENST00000560309 CARMIL1Q5VZK9 1371 aa35.54■■■■□ 3.28
ETFA-213ENST00000560309 NPM1P06748 294 aaKnown RBP eCLIP35.39■■■■□ 3.26
ETFA-213ENST00000560309 CARMIL2Q6F5E8 1435 aa35.27■■■■□ 3.24
ETFA-213ENST00000560309 RAPGEF2Q9Y4G8 1499 aa35.24■■■■□ 3.23
ETFA-213ENST00000560309 PTPRGP23470 1445 aa35.21■■■■□ 3.23
ETFA-213ENST00000560309 IQGAP2Q13576 1575 aa35.21■■■■□ 3.23
ETFA-213ENST00000560309 MAPKBP1O60336 1514 aa35.18■■■■□ 3.22
ETFA-213ENST00000560309 TNIKQ9UKE5 1360 aa35.18■■■■□ 3.22
ETFA-213ENST00000560309 ADCY10Q96PN6 1610 aa35.16■■■■□ 3.22
ETFA-213ENST00000560309 ABCC10Q5T3U5 1492 aa35.12■■■■□ 3.21
ETFA-213ENST00000560309 KIF13AQ9H1H9 1805 aa35.12■■■■□ 3.21
ETFA-213ENST00000560309 FAM69CQ0P6D2 419 aa35.1■■■■□ 3.21
ETFA-213ENST00000560309 UGGT2Q9NYU1 1516 aa35.02■■■■□ 3.2
ETFA-213ENST00000560309 DISP1Q96F81 1524 aa35■■■■□ 3.19
ETFA-213ENST00000560309 TTBK1Q5TCY1 1321 aaPredicted RBP34.99■■■■□ 3.19
ETFA-213ENST00000560309 UHRF1BP1LA0JNW5 1464 aa34.97■■■■□ 3.19
ETFA-213ENST00000560309 ABCC2Q92887 1545 aa34.96■■■■□ 3.19
ETFA-213ENST00000560309 DIP2BQ9P265 1576 aa34.96■■■■□ 3.19
ETFA-213ENST00000560309 UACAQ9BZF9 1416 aa34.94■■■■□ 3.18
ETFA-213ENST00000560309 PRXQ9BXM0 1461 aa34.91■■■■□ 3.18
ETFA-213ENST00000560309 CTTNBP2Q8WZ74 1663 aa34.86■■■■□ 3.17
ETFA-213ENST00000560309 GOLGA3Q08378 1498 aa34.85■■■■□ 3.17
ETFA-213ENST00000560309 PLB1Q6P1J6 1458 aa34.85■■■■□ 3.17
ETFA-213ENST00000560309 KIAA0556O60303 1618 aa34.85■■■■□ 3.17
ETFA-213ENST00000560309 ASXL2Q76L83 1435 aa34.79■■■■□ 3.16
ETFA-213ENST00000560309 AEBP2Q6ZN18 517 aaPredicted RBP34.78■■■■□ 3.16
ETFA-213ENST00000560309 CSRNP3Q8WYN3 585 aa34.78■■■■□ 3.16
ETFA-213ENST00000560309 KDM5BQ9UGL1 1544 aa34.77■■■■□ 3.16
ETFA-213ENST00000560309 FAM9AQ8IZU1 332 aaPredicted RBP34.75■■■■□ 3.15
ETFA-213ENST00000560309 GLI2P10070 1586 aa34.72■■■■□ 3.15
ETFA-213ENST00000560309 EEA1Q15075 1411 aa34.72■■■■□ 3.15
ETFA-213ENST00000560309 TSPOAP1O95153 1857 aa34.66■■■■□ 3.14
ETFA-213ENST00000560309 KDM6BO15054 1643 aa34.62■■■■□ 3.13
ETFA-213ENST00000560309 ZCCHC11Q5TAX3 1644 aaKnown RBP34.61■■■■□ 3.13
ETFA-213ENST00000560309 EPRSP07814 1512 aaKnown RBP34.58■■■■□ 3.13
ETFA-213ENST00000560309 ABCA8O94911 1581 aa34.54■■■■□ 3.12
ETFA-213ENST00000560309 WDR7Q9Y4E6 1490 aa34.5■■■■□ 3.11
ETFA-213ENST00000560309 TEX14Q8IWB6 1497 aa34.46■■■■□ 3.11
ETFA-213ENST00000560309 MAP3K4Q9Y6R4 1608 aa34.45■■■■□ 3.11
ETFA-213ENST00000560309 PPRC1Q5VV67 1664 aaKnown RBP34.45■■■■□ 3.11
ETFA-213ENST00000560309 P3H3Q8IVL6 736 aa34.41■■■■□ 3.1
ETFA-213ENST00000560309 SAMD9Q5K651 1589 aa34.39■■■■□ 3.1
ETFA-213ENST00000560309 KCNH8Q96L42 1107 aa34.34■■■■□ 3.09
ETFA-213ENST00000560309 CD109Q6YHK3 1445 aa34.3■■■■□ 3.08
ETFA-213ENST00000560309 KIF21BO75037 1637 aa34.3■■■■□ 3.08
ETFA-213ENST00000560309 CFAP43Q8NDM7 1665 aa34.29■■■■□ 3.08
ETFA-213ENST00000560309 ATP10BO94823 1461 aa34.28■■■■□ 3.08
ETFA-213ENST00000560309 MAGI3Q5TCQ9 1506 aa34.28■■■■□ 3.08
ETFA-213ENST00000560309 CHIC1Q5VXU3 224 aa34.26■■■■□ 3.08
ETFA-213ENST00000560309 COL17A1Q9UMD9 1497 aaPredicted RBP34.22■■■■□ 3.07
ETFA-213ENST00000560309 RAPGEF6Q8TEU7 1601 aa34.22■■■■□ 3.07
ETFA-213ENST00000560309 RANGAP1P46060 587 aaPredicted RBP34.18■■■■□ 3.06
ETFA-213ENST00000560309 KDM4FA0A1W2PPD8 638 aa34.17■■■■□ 3.06
ETFA-213ENST00000560309 EFCAB5A4FU69 1503 aa34.17■■■■□ 3.06
ETFA-213ENST00000560309 ARID3CA6NKF2 412 aa34.17■■■■□ 3.06
ETFA-213ENST00000560309 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.15■■■■□ 3.06
ETFA-213ENST00000560309 HNRNPUL2Q1KMD3 747 aaKnown RBP34.15■■■■□ 3.06
ETFA-213ENST00000560309 FHOD3Q2V2M9 1422 aa34.13■■■■□ 3.05
ETFA-213ENST00000560309 PHLDB1Q86UU1 1377 aa34.11■■■■□ 3.05
ETFA-213ENST00000560309 UBTFP17480 764 aaKnown RBP34.1■■■■□ 3.05
ETFA-213ENST00000560309 NUP153P49790 1475 aaKnown RBP34.07■■■■□ 3.05
ETFA-213ENST00000560309 ABCA9Q8IUA7 1624 aa34.05■■■■□ 3.04
ETFA-213ENST00000560309 PLEKHD1A6NEE1 506 aa34.05■■■■□ 3.04
ETFA-213ENST00000560309 ARAP3Q8WWN8 1544 aa34.01■■■■□ 3.04
ETFA-213ENST00000560309 ADGRL1O94910 1474 aa33.94■■■■□ 3.02
ETFA-213ENST00000560309 NEO1Q92859 1461 aa33.93■■■■□ 3.02
ETFA-213ENST00000560309 FMN1Q68DA7 1419 aa33.91■■■■□ 3.02
ETFA-213ENST00000560309 EHMT2Q96KQ7 1210 aa33.88■■■■□ 3.01
ETFA-213ENST00000560309 ARHGAP35Q9NRY4 1499 aa33.82■■■■□ 3
ETFA-213ENST00000560309 CDK11AQ9UQ88 783 aaPredicted RBP33.8■■■■□ 3
ETFA-213ENST00000560309 ATP1B4Q9UN42 357 aaPredicted RBP33.75■■■□□ 2.99
ETFA-213ENST00000560309 RAPGEF3O95398 923 aa33.74■■■□□ 2.99
ETFA-213ENST00000560309 HECW1Q76N89 1606 aa33.74■■■□□ 2.99
ETFA-213ENST00000560309 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.73■■■□□ 2.995e-9■□□□□ 10.1
ETFA-213ENST00000560309 CDK13Q14004 1512 aaKnown RBP33.7■■■□□ 2.99
ETFA-213ENST00000560309 CFAP74Q9C0B2 1584 aa33.7■■■□□ 2.99
ETFA-213ENST00000560309 AKNAQ7Z591 1439 aa33.69■■■□□ 2.98
ETFA-213ENST00000560309 FANCAO15360 1455 aa33.68■■■□□ 2.98
ETFA-213ENST00000560309 DENND4BO75064 1496 aaPredicted RBP33.66■■■□□ 2.98
ETFA-213ENST00000560309 PLCH2O75038 1416 aa33.62■■■□□ 2.97
ETFA-213ENST00000560309 TTC37Q6PGP7 1564 aa33.61■■■□□ 2.97
ETFA-213ENST00000560309 FRMPD1Q5SYB0 1578 aa33.57■■■□□ 2.96
ETFA-213ENST00000560309 CLIP1P30622 1438 aa33.55■■■□□ 2.96
ETFA-213ENST00000560309 EFCAB2Q5VUJ9 269 aa33.55■■■□□ 2.96
ETFA-213ENST00000560309 TROQ12816 1431 aaPredicted RBP33.54■■■□□ 2.96
ETFA-213ENST00000560309 RICTORQ6R327 1708 aa33.53■■■□□ 2.96
ETFA-213ENST00000560309 CASKIN1Q8WXD9 1431 aa33.53■■■□□ 2.96
ETFA-213ENST00000560309 MAGI2Q86UL8 1455 aa33.5■■■□□ 2.95
ETFA-213ENST00000560309 CCDC18Q5T9S5 1454 aa33.49■■■□□ 2.95
ETFA-213ENST00000560309 ARID4BQ4LE39 1312 aaPredicted RBP33.49■■■□□ 2.95
ETFA-213ENST00000560309 KIF14Q15058 1648 aa33.48■■■□□ 2.95
ETFA-213ENST00000560309 MYO5CQ9NQX4 1742 aa33.47■■■□□ 2.95
ETFA-213ENST00000560309 SCAPERQ9BY12 1400 aa33.46■■■□□ 2.95
ETFA-213ENST00000560309 ZMYM4Q5VZL5 1548 aa33.46■■■□□ 2.95
ETFA-213ENST00000560309 ARHGEF40Q8TER5 1519 aa33.44■■■□□ 2.94
ETFA-213ENST00000560309 ADAMTSL3P82987 1691 aa33.44■■■□□ 2.94
ETFA-213ENST00000560309 LRRIQ1Q96JM4 1722 aa33.39■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms