RNA–Protein interactions for RNA: ENST00000560253.1

MEIS3-208, Transcript of Meis homeobox 3, humanhuman

TSL 2

Gene MEIS3, Length 1,060 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-208ENST00000560253 ILDR1Q86SU0 546 aaPredicted RBP25.23■■□□□ 1.63
MEIS3-208ENST00000560253 PRG4Q92954 1404 aaPredicted RBP25.2■■□□□ 1.62
MEIS3-208ENST00000560253 SHROOM2Q13796 1616 aa25.19■■□□□ 1.62
MEIS3-208ENST00000560253 KIAA0586Q9BVV6 1533 aa25.18■■□□□ 1.62
MEIS3-208ENST00000560253 RUSC2Q8N2Y8 1516 aa25.13■■□□□ 1.61
MEIS3-208ENST00000560253 ERCC6L2Q5T890 1561 aa25.11■■□□□ 1.61
MEIS3-208ENST00000560253 RAPGEF2Q9Y4G8 1499 aa25.09■■□□□ 1.61
MEIS3-208ENST00000560253 CARMIL2Q6F5E8 1435 aa25.02■■□□□ 1.6
MEIS3-208ENST00000560253 NPM1P06748 294 aaKnown RBP eCLIP25.01■■□□□ 1.59
MEIS3-208ENST00000560253 KIF13AQ9H1H9 1805 aa24.99■■□□□ 1.59
MEIS3-208ENST00000560253 IQGAP2Q13576 1575 aa24.97■■□□□ 1.59
MEIS3-208ENST00000560253 CSRNP3Q8WYN3 585 aa24.95■■□□□ 1.58
MEIS3-208ENST00000560253 KDM4FA0A1W2PPD8 638 aa24.92■■□□□ 1.58
MEIS3-208ENST00000560253 EEA1Q15075 1411 aa24.92■■□□□ 1.58
MEIS3-208ENST00000560253 PTPRGP23470 1445 aa24.91■■□□□ 1.58
MEIS3-208ENST00000560253 TNIKQ9UKE5 1360 aa24.9■■□□□ 1.58
MEIS3-208ENST00000560253 TTBK1Q5TCY1 1321 aaPredicted RBP24.89■■□□□ 1.58
MEIS3-208ENST00000560253 PRXQ9BXM0 1461 aa24.88■■□□□ 1.57
MEIS3-208ENST00000560253 FAM9AQ8IZU1 332 aaPredicted RBP24.84■■□□□ 1.57
MEIS3-208ENST00000560253 CHIC1Q5VXU3 224 aa24.83■■□□□ 1.57
MEIS3-208ENST00000560253 UGGT2Q9NYU1 1516 aa24.81■■□□□ 1.56
MEIS3-208ENST00000560253 CTTNBP2Q8WZ74 1663 aa24.78■■□□□ 1.56
MEIS3-208ENST00000560253 GOLGA3Q08378 1498 aa24.77■■□□□ 1.56
MEIS3-208ENST00000560253 DISP1Q96F81 1524 aa24.76■■□□□ 1.55
MEIS3-208ENST00000560253 ADCY10Q96PN6 1610 aa24.72■■□□□ 1.55
MEIS3-208ENST00000560253 UACAQ9BZF9 1416 aa24.7■■□□□ 1.55
MEIS3-208ENST00000560253 KIAA0556O60303 1618 aa24.69■■□□□ 1.54
MEIS3-208ENST00000560253 MAPKBP1O60336 1514 aa24.67■■□□□ 1.54
MEIS3-208ENST00000560253 FAM69CQ0P6D2 419 aa24.67■■□□□ 1.54
MEIS3-208ENST00000560253 ABCC10Q5T3U5 1492 aa24.66■■□□□ 1.54
MEIS3-208ENST00000560253 UHRF1BP1LA0JNW5 1464 aa24.65■■□□□ 1.54
MEIS3-208ENST00000560253 ABCC2Q92887 1545 aa24.65■■□□□ 1.54
MEIS3-208ENST00000560253 KDM6BO15054 1643 aa24.61■■□□□ 1.53
MEIS3-208ENST00000560253 P3H3Q8IVL6 736 aa24.58■■□□□ 1.53
MEIS3-208ENST00000560253 DIP2BQ9P265 1576 aa24.58■■□□□ 1.52
MEIS3-208ENST00000560253 PLB1Q6P1J6 1458 aa24.57■■□□□ 1.52
MEIS3-208ENST00000560253 UBTFP17480 764 aaKnown RBP24.56■■□□□ 1.52
MEIS3-208ENST00000560253 KIF21BO75037 1637 aa24.55■■□□□ 1.52
MEIS3-208ENST00000560253 RANGAP1P46060 587 aaPredicted RBP24.54■■□□□ 1.52
MEIS3-208ENST00000560253 KDM5BQ9UGL1 1544 aa24.52■■□□□ 1.52
MEIS3-208ENST00000560253 ASXL2Q76L83 1435 aa24.52■■□□□ 1.52
MEIS3-208ENST00000560253 EHMT2Q96KQ7 1210 aa24.48■■□□□ 1.51
MEIS3-208ENST00000560253 TSPOAP1O95153 1857 aa24.46■■□□□ 1.51
MEIS3-208ENST00000560253 ABCA8O94911 1581 aa24.43■■□□□ 1.5
MEIS3-208ENST00000560253 HECW2Q9P2P5 1572 aa24.43■■□□□ 1.5
MEIS3-208ENST00000560253 ZCCHC11Q5TAX3 1644 aaKnown RBP24.43■■□□□ 1.5
MEIS3-208ENST00000560253 SAMD9Q5K651 1589 aa24.42■■□□□ 1.5
MEIS3-208ENST00000560253 ADGRL1O94910 1474 aa24.4■■□□□ 1.5
MEIS3-208ENST00000560253 GLI2P10070 1586 aa24.37■■□□□ 1.49
MEIS3-208ENST00000560253 EFCAB5A4FU69 1503 aa24.37■■□□□ 1.49
MEIS3-208ENST00000560253 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.37■■□□□ 1.49
MEIS3-208ENST00000560253 HNRNPUL2Q1KMD3 747 aaKnown RBP24.37■■□□□ 1.49
MEIS3-208ENST00000560253 WDR7Q9Y4E6 1490 aa24.36■■□□□ 1.49
MEIS3-208ENST00000560253 KCNH8Q96L42 1107 aa24.35■■□□□ 1.49
MEIS3-208ENST00000560253 EPRSP07814 1512 aaKnown RBP24.35■■□□□ 1.49
MEIS3-208ENST00000560253 FHOD3Q2V2M9 1422 aa24.34■■□□□ 1.49
MEIS3-208ENST00000560253 ARID3CA6NKF2 412 aa24.33■■□□□ 1.49
MEIS3-208ENST00000560253 RAPGEF6Q8TEU7 1601 aa24.29■■□□□ 1.48
MEIS3-208ENST00000560253 ATP10BO94823 1461 aa24.28■■□□□ 1.48
MEIS3-208ENST00000560253 TEX14Q8IWB6 1497 aa24.26■■□□□ 1.47
MEIS3-208ENST00000560253 FBXO41Q8TF61 875 aa24.25■■□□□ 1.47
MEIS3-208ENST00000560253 PLEKHD1A6NEE1 506 aa24.23■■□□□ 1.47
MEIS3-208ENST00000560253 FMN1Q68DA7 1419 aa24.22■■□□□ 1.47
MEIS3-208ENST00000560253 CD109Q6YHK3 1445 aa24.22■■□□□ 1.47
MEIS3-208ENST00000560253 ATP1B4Q9UN42 357 aaPredicted RBP24.22■■□□□ 1.47
MEIS3-208ENST00000560253 PPRC1Q5VV67 1664 aaKnown RBP24.21■■□□□ 1.47
MEIS3-208ENST00000560253 MAP3K4Q9Y6R4 1608 aa24.21■■□□□ 1.47
MEIS3-208ENST00000560253 NUP153P49790 1475 aaKnown RBP24.18■■□□□ 1.46
MEIS3-208ENST00000560253 CFAP43Q8NDM7 1665 aa24.16■■□□□ 1.46
MEIS3-208ENST00000560253 ARHGAP35Q9NRY4 1499 aa24.16■■□□□ 1.46
MEIS3-208ENST00000560253 COL17A1Q9UMD9 1497 aaPredicted RBP24.15■■□□□ 1.46
MEIS3-208ENST00000560253 CDK11AQ9UQ88 783 aaPredicted RBP24.13■■□□□ 1.45
MEIS3-208ENST00000560253 MAGI3Q5TCQ9 1506 aa24.13■■□□□ 1.45
MEIS3-208ENST00000560253 PHLDB1Q86UU1 1377 aa24.05■■□□□ 1.44
MEIS3-208ENST00000560253 HECW1Q76N89 1606 aa24.05■■□□□ 1.44
MEIS3-208ENST00000560253 ABCA9Q8IUA7 1624 aa24.03■■□□□ 1.44
MEIS3-208ENST00000560253 CLIP1P30622 1438 aa24.03■■□□□ 1.44
MEIS3-208ENST00000560253 CDK13Q14004 1512 aaKnown RBP23.99■■□□□ 1.43
MEIS3-208ENST00000560253 NEO1Q92859 1461 aa23.94■■□□□ 1.42
MEIS3-208ENST00000560253 CASKIN1Q8WXD9 1431 aa23.93■■□□□ 1.42
MEIS3-208ENST00000560253 ARAP3Q8WWN8 1544 aa23.92■■□□□ 1.42
MEIS3-208ENST00000560253 LMTK3Q96Q04 1460 aa23.92■■□□□ 1.42
MEIS3-208ENST00000560253 CCDC18Q5T9S5 1454 aa23.91■■□□□ 1.42
MEIS3-208ENST00000560253 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.88■■□□□ 1.41
MEIS3-208ENST00000560253 TROQ12816 1431 aaPredicted RBP23.87■■□□□ 1.41
MEIS3-208ENST00000560253 FYCO1Q9BQS8 1478 aa23.87■■□□□ 1.41
MEIS3-208ENST00000560253 CFAP74Q9C0B2 1584 aa23.84■■□□□ 1.41
MEIS3-208ENST00000560253 FANCAO15360 1455 aa23.84■■□□□ 1.41
MEIS3-208ENST00000560253 EFCAB2Q5VUJ9 269 aa23.84■■□□□ 1.41
MEIS3-208ENST00000560253 PCF11O94913 1555 aaKnown RBP23.83■■□□□ 1.41
MEIS3-208ENST00000560253 RAPGEF3O95398 923 aa23.83■■□□□ 1.41
MEIS3-208ENST00000560253 CEP162Q5TB80 1403 aa23.83■■□□□ 1.4
MEIS3-208ENST00000560253 AKNAQ7Z591 1439 aa23.83■■□□□ 1.4
MEIS3-208ENST00000560253 PLCH2O75038 1416 aa23.82■■□□□ 1.4
MEIS3-208ENST00000560253 KIF14Q15058 1648 aa23.81■■□□□ 1.4
MEIS3-208ENST00000560253 LOC105371045A0A1W2PR82 267 aa23.81■■□□□ 1.4
MEIS3-208ENST00000560253 TTC37Q6PGP7 1564 aa23.8■■□□□ 1.4
MEIS3-208ENST00000560253 DENND4BO75064 1496 aaPredicted RBP23.8■■□□□ 1.4
MEIS3-208ENST00000560253 LRRIQ1Q96JM4 1722 aa23.74■■□□□ 1.39
MEIS3-208ENST00000560253 ILDR2Q71H61 639 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms