RNA–Protein interactions for RNA: ENST00000559566.5

SHF-205, Transcript of Src homology 2 domain containing F, humanhuman

TSL 1 (best)

Gene SHF, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-205ENST00000559566 PRXQ9BXM0 1461 aa32.74■■■□□ 2.83
SHF-205ENST00000559566 SHROOM2Q13796 1616 aa32.74■■■□□ 2.83
SHF-205ENST00000559566 KIAA0586Q9BVV6 1533 aa32.72■■■□□ 2.83
SHF-205ENST00000559566 CSRNP3Q8WYN3 585 aa32.71■■■□□ 2.83
SHF-205ENST00000559566 FAM9AQ8IZU1 332 aaPredicted RBP32.7■■■□□ 2.83
SHF-205ENST00000559566 EEA1Q15075 1411 aa32.68■■■□□ 2.82
SHF-205ENST00000559566 JPH4Q96JJ6 628 aa32.68■■■□□ 2.82
SHF-205ENST00000559566 CYB5RLQ6IPT4 315 aa32.66■■■□□ 2.82
SHF-205ENST00000559566 PRG4Q92954 1404 aaPredicted RBP32.62■■■□□ 2.81
SHF-205ENST00000559566 IQGAP2Q13576 1575 aa32.53■■■□□ 2.8
SHF-205ENST00000559566 CTTNBP2Q8WZ74 1663 aa32.4■■■□□ 2.78
SHF-205ENST00000559566 UGGT2Q9NYU1 1516 aa32.39■■■□□ 2.78
SHF-205ENST00000559566 KIF21BO75037 1637 aa32.39■■■□□ 2.78
SHF-205ENST00000559566 DISP1Q96F81 1524 aa32.37■■■□□ 2.77
SHF-205ENST00000559566 EHMT2Q96KQ7 1210 aa32.31■■■□□ 2.76
SHF-205ENST00000559566 CARMIL2Q6F5E8 1435 aa32.29■■■□□ 2.76
SHF-205ENST00000559566 KIAA0556O60303 1618 aa32.26■■■□□ 2.75
SHF-205ENST00000559566 TNIKQ9UKE5 1360 aa32.25■■■□□ 2.75
SHF-205ENST00000559566 TTBK1Q5TCY1 1321 aaPredicted RBP32.23■■■□□ 2.75
SHF-205ENST00000559566 PTPRGP23470 1445 aa32.22■■■□□ 2.75
SHF-205ENST00000559566 GOLGA3Q08378 1498 aa32.21■■■□□ 2.75
SHF-205ENST00000559566 ADCY10Q96PN6 1610 aa32.12■■■□□ 2.73
SHF-205ENST00000559566 UBTFP17480 764 aaKnown RBP32.11■■■□□ 2.73
SHF-205ENST00000559566 RANGAP1P46060 587 aaPredicted RBP32.1■■■□□ 2.73
SHF-205ENST00000559566 P3H3Q8IVL6 736 aa32.08■■■□□ 2.73
SHF-205ENST00000559566 SAMD9Q5K651 1589 aa32.07■■■□□ 2.72
SHF-205ENST00000559566 UACAQ9BZF9 1416 aa32.01■■■□□ 2.72
SHF-205ENST00000559566 UHRF1BP1LA0JNW5 1464 aa31.97■■■□□ 2.71
SHF-205ENST00000559566 PLB1Q6P1J6 1458 aa31.97■■■□□ 2.71
SHF-205ENST00000559566 ABCC2Q92887 1545 aa31.95■■■□□ 2.71
SHF-205ENST00000559566 FHOD3Q2V2M9 1422 aa31.95■■■□□ 2.71
SHF-205ENST00000559566 ABCA8O94911 1581 aa31.92■■■□□ 2.7
SHF-205ENST00000559566 TRHP20396 242 aaPredicted RBP31.91■■■□□ 2.7
SHF-205ENST00000559566 EFCAB5A4FU69 1503 aa31.9■■■□□ 2.7
SHF-205ENST00000559566 NPM1P06748 294 aaKnown RBP eCLIP31.88■■■□□ 2.69
SHF-205ENST00000559566 ARHGAP35Q9NRY4 1499 aa31.86■■■□□ 2.69
SHF-205ENST00000559566 MAPKBP1O60336 1514 aa31.85■■■□□ 2.69
SHF-205ENST00000559566 KDM5BQ9UGL1 1544 aa31.84■■■□□ 2.69
SHF-205ENST00000559566 ZCCHC11Q5TAX3 1644 aaKnown RBP31.76■■■□□ 2.67
SHF-205ENST00000559566 LOC105371045A0A1W2PR82 267 aa31.76■■■□□ 2.67
SHF-205ENST00000559566 ASXL2Q76L83 1435 aa31.74■■■□□ 2.67
SHF-205ENST00000559566 RAPGEF6Q8TEU7 1601 aa31.72■■■□□ 2.67
SHF-205ENST00000559566 ARID3CA6NKF2 412 aa31.72■■■□□ 2.67
SHF-205ENST00000559566 ABCC10Q5T3U5 1492 aa31.72■■■□□ 2.67
SHF-205ENST00000559566 NUP153P49790 1475 aaKnown RBP31.67■■■□□ 2.66
SHF-205ENST00000559566 DIP2BQ9P265 1576 aa31.67■■■□□ 2.66
SHF-205ENST00000559566 ATP10BO94823 1461 aa31.66■■■□□ 2.66
SHF-205ENST00000559566 CLIP1P30622 1438 aa31.66■■■□□ 2.66
SHF-205ENST00000559566 KIF13AQ9H1H9 1805 aa31.65■■■□□ 2.66
SHF-205ENST00000559566 FAM69CQ0P6D2 419 aa31.64■■■□□ 2.66
SHF-205ENST00000559566 FMN1Q68DA7 1419 aa31.59■■■□□ 2.65
SHF-205ENST00000559566 WDR7Q9Y4E6 1490 aa31.57■■■□□ 2.64
SHF-205ENST00000559566 CEP162Q5TB80 1403 aa31.56■■■□□ 2.64
SHF-205ENST00000559566 EPRSP07814 1512 aaKnown RBP31.55■■■□□ 2.64
SHF-205ENST00000559566 GLI2P10070 1586 aa31.49■■■□□ 2.63
SHF-205ENST00000559566 CDK13Q14004 1512 aaKnown RBP31.48■■■□□ 2.63
SHF-205ENST00000559566 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.45■■■□□ 2.63
SHF-205ENST00000559566 PCF11O94913 1555 aaKnown RBP31.45■■■□□ 2.63
SHF-205ENST00000559566 HNRNPUL2Q1KMD3 747 aaKnown RBP31.45■■■□□ 2.63
SHF-205ENST00000559566 ATP1B4Q9UN42 357 aaPredicted RBP31.45■■■□□ 2.63
SHF-205ENST00000559566 HECW1Q76N89 1606 aa31.44■■■□□ 2.62
SHF-205ENST00000559566 KCNH8Q96L42 1107 aa31.43■■■□□ 2.62
SHF-205ENST00000559566 CASKIN1Q8WXD9 1431 aa31.41■■■□□ 2.62
SHF-205ENST00000559566 LRRIQ1Q96JM4 1722 aa31.36■■■□□ 2.61
SHF-205ENST00000559566 MAP3K4Q9Y6R4 1608 aa31.36■■■□□ 2.61
SHF-205ENST00000559566 PPRC1Q5VV67 1664 aaKnown RBP31.34■■■□□ 2.61
SHF-205ENST00000559566 TSPOAP1O95153 1857 aa31.33■■■□□ 2.61
SHF-205ENST00000559566 FYCO1Q9BQS8 1478 aa31.32■■■□□ 2.6
SHF-205ENST00000559566 PLEKHD1A6NEE1 506 aa31.31■■■□□ 2.6
SHF-205ENST00000559566 CD109Q6YHK3 1445 aa31.25■■■□□ 2.59
SHF-205ENST00000559566 ABCA9Q8IUA7 1624 aa31.24■■■□□ 2.59
SHF-205ENST00000559566 CFAP43Q8NDM7 1665 aa31.23■■■□□ 2.59
SHF-205ENST00000559566 CCDC18Q5T9S5 1454 aa31.21■■■□□ 2.59
SHF-205ENST00000559566 MAGI3Q5TCQ9 1506 aa31.19■■■□□ 2.58
SHF-205ENST00000559566 TROQ12816 1431 aaPredicted RBP31.17■■■□□ 2.58
SHF-205ENST00000559566 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.17■■■□□ 2.58
SHF-205ENST00000559566 VPS8Q8N3P4 1428 aa31.15■■■□□ 2.58
SHF-205ENST00000559566 TTC37Q6PGP7 1564 aa31.14■■■□□ 2.58
SHF-205ENST00000559566 CDK11AQ9UQ88 783 aaPredicted RBP31.14■■■□□ 2.58
SHF-205ENST00000559566 TEX14Q8IWB6 1497 aa31.14■■■□□ 2.57
SHF-205ENST00000559566 KIF14Q15058 1648 aa31.13■■■□□ 2.57
SHF-205ENST00000559566 COL17A1Q9UMD9 1497 aaPredicted RBP31.12■■■□□ 2.57
SHF-205ENST00000559566 KDM6BO15054 1643 aa31.09■■■□□ 2.57
SHF-205ENST00000559566 PLCH2O75038 1416 aa30.97■■■□□ 2.55
SHF-205ENST00000559566 NEO1Q92859 1461 aa30.95■■■□□ 2.54
SHF-205ENST00000559566 MTUS2Q5JR59 1369 aa30.93■■■□□ 2.54
SHF-205ENST00000559566 TIAM1Q13009 1591 aa30.93■■■□□ 2.54
SHF-205ENST00000559566 FANCAO15360 1455 aa30.93■■■□□ 2.54
SHF-205ENST00000559566 ARAP3Q8WWN8 1544 aa30.91■■■□□ 2.54
SHF-205ENST00000559566 EHBP1L1Q8N3D4 1523 aa30.89■■■□□ 2.54
SHF-205ENST00000559566 AKNAQ7Z591 1439 aa30.88■■■□□ 2.53
SHF-205ENST00000559566 MYO5CQ9NQX4 1742 aa30.87■■■□□ 2.53
SHF-205ENST00000559566 PHLDB1Q86UU1 1377 aa30.87■■■□□ 2.53
SHF-205ENST00000559566 KANK4Q5T7N3 995 aaPredicted RBP30.84■■■□□ 2.53
SHF-205ENST00000559566 MAP3K1Q13233 1512 aa30.83■■■□□ 2.53
SHF-205ENST00000559566 RAPGEF3O95398 923 aa30.82■■■□□ 2.52
SHF-205ENST00000559566 ARHGAP5Q13017 1502 aa30.82■■■□□ 2.52
SHF-205ENST00000559566 LRRC9Q6ZRR7 1453 aa30.82■■■□□ 2.52
SHF-205ENST00000559566 PREX2Q70Z35 1606 aa30.81■■■□□ 2.52
SHF-205ENST00000559566 FRMPD1Q5SYB0 1578 aa30.81■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms