RNA–Protein interactions for RNA: ENST00000559289.1

SHC4-206, Transcript of SHC adaptor protein 4, humanhuman

TSL 3

Gene SHC4, Length 864 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-206ENST00000559289 CEP170Q5SW79 1584 aa9.87□□□□□ -0.83
SHC4-206ENST00000559289 ADRA2BP18089 450 aa9.86□□□□□ -0.83
SHC4-206ENST00000559289 NUP160Q12769 1436 aa9.86□□□□□ -0.83
SHC4-206ENST00000559289 CHMP7Q8WUX9 453 aaPredicted RBP9.86□□□□□ -0.83
SHC4-206ENST00000559289 FBLN2P98095 1184 aa9.85□□□□□ -0.83
SHC4-206ENST00000559289 CLASP1Q7Z460 1538 aa9.84□□□□□ -0.83
SHC4-206ENST00000559289 CTTNBP2Q8WZ74 1663 aa9.81□□□□□ -0.84
SHC4-206ENST00000559289 OSCARQ8IYS5 282 aa9.81□□□□□ -0.84
SHC4-206ENST00000559289 GOLGA3Q08378 1498 aa9.79□□□□□ -0.84
SHC4-206ENST00000559289 KIAA0586Q9BVV6 1533 aa9.79□□□□□ -0.84
SHC4-206ENST00000559289 SHROOM2Q13796 1616 aa9.78□□□□□ -0.84
SHC4-206ENST00000559289 IQGAP2Q13576 1575 aa9.77□□□□□ -0.85
SHC4-206ENST00000559289 EHMT2Q96KQ7 1210 aa9.76□□□□□ -0.85
SHC4-206ENST00000559289 CACNB1Q02641 598 aaPredicted RBP9.75□□□□□ -0.85
SHC4-206ENST00000559289 ERCC6L2Q5T890 1561 aa9.75□□□□□ -0.85
SHC4-206ENST00000559289 LOC105371045A0A1W2PR82 267 aa9.74□□□□□ -0.85
SHC4-206ENST00000559289 UGGT2Q9NYU1 1516 aa9.73□□□□□ -0.85
SHC4-206ENST00000559289 JPH4Q96JJ6 628 aa9.72□□□□□ -0.85
SHC4-206ENST00000559289 DISP1Q96F81 1524 aa9.72□□□□□ -0.85
SHC4-206ENST00000559289 PLPPR3Q6T4P5 718 aa9.71□□□□□ -0.86
SHC4-206ENST00000559289 TNIKQ9UKE5 1360 aa9.71□□□□□ -0.86
SHC4-206ENST00000559289 ARHGEF11O15085 1522 aa9.71□□□□□ -0.86
SHC4-206ENST00000559289 RIMBP3CA6NJZ7 1639 aa9.71□□□□□ -0.86
SHC4-206ENST00000559289 RIMBP3BA6NNM3 1639 aa9.71□□□□□ -0.86
SHC4-206ENST00000559289 RIMBP3Q9UFD9 1639 aa9.71□□□□□ -0.86
SHC4-206ENST00000559289 UBTFP17480 764 aaKnown RBP9.7□□□□□ -0.86
SHC4-206ENST00000559289 DNAJC5Q9H3Z4 198 aa9.7□□□□□ -0.86
SHC4-206ENST00000559289 PRG4Q92954 1404 aaPredicted RBP9.7□□□□□ -0.86
SHC4-206ENST00000559289 SAMD9Q5K651 1589 aa9.7□□□□□ -0.86
SHC4-206ENST00000559289 KIAA0556O60303 1618 aa9.69□□□□□ -0.86
SHC4-206ENST00000559289 ARHGAP35Q9NRY4 1499 aa9.66□□□□□ -0.86
SHC4-206ENST00000559289 ARAP1Q96P48 1450 aa9.66□□□□□ -0.86
SHC4-206ENST00000559289 EFCAB5A4FU69 1503 aa9.65□□□□□ -0.86
SHC4-206ENST00000559289 CARMIL2Q6F5E8 1435 aa9.64□□□□□ -0.87
SHC4-206ENST00000559289 RANGAP1P46060 587 aaPredicted RBP9.63□□□□□ -0.87
SHC4-206ENST00000559289 CEP162Q5TB80 1403 aa9.63□□□□□ -0.87
SHC4-206ENST00000559289 CLIP1P30622 1438 aa9.62□□□□□ -0.87
SHC4-206ENST00000559289 FHOD3Q2V2M9 1422 aa9.62□□□□□ -0.87
SHC4-206ENST00000559289 P3H3Q8IVL6 736 aa9.61□□□□□ -0.87
SHC4-206ENST00000559289 ABCA8O94911 1581 aa9.58□□□□□ -0.88
SHC4-206ENST00000559289 PTPRGP23470 1445 aa9.58□□□□□ -0.88
SHC4-206ENST00000559289 ADCY10Q96PN6 1610 aa9.57□□□□□ -0.88
SHC4-206ENST00000559289 PLB1Q6P1J6 1458 aa9.57□□□□□ -0.88
SHC4-206ENST00000559289 CYB5RLQ6IPT4 315 aa9.56□□□□□ -0.88
SHC4-206ENST00000559289 RAPGEF6Q8TEU7 1601 aa9.55□□□□□ -0.88
SHC4-206ENST00000559289 ABCC2Q92887 1545 aa9.55□□□□□ -0.88
SHC4-206ENST00000559289 UACAQ9BZF9 1416 aa9.55□□□□□ -0.88
SHC4-206ENST00000559289 TTBK1Q5TCY1 1321 aaPredicted RBP9.55□□□□□ -0.88
SHC4-206ENST00000559289 UHRF1BP1LA0JNW5 1464 aa9.54□□□□□ -0.88
SHC4-206ENST00000559289 LRRIQ1Q96JM4 1722 aa9.54□□□□□ -0.88
SHC4-206ENST00000559289 PCF11O94913 1555 aaKnown RBP9.54□□□□□ -0.88
SHC4-206ENST00000559289 FMN1Q68DA7 1419 aa9.53□□□□□ -0.88
SHC4-206ENST00000559289 NUP153P49790 1475 aaKnown RBP9.52□□□□□ -0.89
SHC4-206ENST00000559289 ZCCHC11Q5TAX3 1644 aaKnown RBP9.51□□□□□ -0.89
SHC4-206ENST00000559289 KDM5BQ9UGL1 1544 aa9.51□□□□□ -0.89
SHC4-206ENST00000559289 VPS8Q8N3P4 1428 aa9.5□□□□□ -0.89
SHC4-206ENST00000559289 CASKIN1Q8WXD9 1431 aa9.5□□□□□ -0.89
SHC4-206ENST00000559289 HECW1Q76N89 1606 aa9.49□□□□□ -0.89
SHC4-206ENST00000559289 ATP10BO94823 1461 aa9.49□□□□□ -0.89
SHC4-206ENST00000559289 FYCO1Q9BQS8 1478 aa9.49□□□□□ -0.89
SHC4-206ENST00000559289 CDK13Q14004 1512 aaKnown RBP9.48□□□□□ -0.89
SHC4-206ENST00000559289 EPRSP07814 1512 aaKnown RBP9.47□□□□□ -0.89
SHC4-206ENST00000559289 MAPKBP1O60336 1514 aa9.45□□□□□ -0.9
SHC4-206ENST00000559289 ARID3CA6NKF2 412 aa9.44□□□□□ -0.9
SHC4-206ENST00000559289 MAGI3Q5TCQ9 1506 aa9.44□□□□□ -0.9
SHC4-206ENST00000559289 CFAP43Q8NDM7 1665 aa9.44□□□□□ -0.9
SHC4-206ENST00000559289 TIAM1Q13009 1591 aa9.42□□□□□ -0.9
SHC4-206ENST00000559289 CCDC18Q5T9S5 1454 aa9.42□□□□□ -0.9
SHC4-206ENST00000559289 ASXL2Q76L83 1435 aa9.42□□□□□ -0.9
SHC4-206ENST00000559289 ATP1B4Q9UN42 357 aaPredicted RBP9.42□□□□□ -0.9
SHC4-206ENST00000559289 MAP3K1Q13233 1512 aa9.41□□□□□ -0.9
SHC4-206ENST00000559289 WDR7Q9Y4E6 1490 aa9.4□□□□□ -0.9
SHC4-206ENST00000559289 KIF13AQ9H1H9 1805 aa9.4□□□□□ -0.9
SHC4-206ENST00000559289 NPM1P06748 294 aaKnown RBP eCLIP9.4□□□□□ -0.9
SHC4-206ENST00000559289 DIP2BQ9P265 1576 aa9.39□□□□□ -0.91
SHC4-206ENST00000559289 KIF14Q15058 1648 aa9.38□□□□□ -0.91
SHC4-206ENST00000559289 ABCC10Q5T3U5 1492 aa9.38□□□□□ -0.91
SHC4-206ENST00000559289 TROQ12816 1431 aaPredicted RBP9.38□□□□□ -0.91
SHC4-206ENST00000559289 LRRC9Q6ZRR7 1453 aa9.37□□□□□ -0.91
SHC4-206ENST00000559289 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.37□□□□□ -0.91
SHC4-206ENST00000559289 HNRNPUL2Q1KMD3 747 aaKnown RBP9.37□□□□□ -0.91
SHC4-206ENST00000559289 GLI2P10070 1586 aa9.37□□□□□ -0.91
SHC4-206ENST00000559289 KANK4Q5T7N3 995 aaPredicted RBP9.36□□□□□ -0.91
SHC4-206ENST00000559289 EHBP1L1Q8N3D4 1523 aa9.36□□□□□ -0.91
SHC4-206ENST00000559289 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.36□□□□□ -0.91
SHC4-206ENST00000559289 ABCA9Q8IUA7 1624 aa9.35□□□□□ -0.91
SHC4-206ENST00000559289 PLEKHD1A6NEE1 506 aa9.35□□□□□ -0.91
SHC4-206ENST00000559289 TTC37Q6PGP7 1564 aa9.35□□□□□ -0.91
SHC4-206ENST00000559289 DMRT2Q9Y5R5 561 aa9.35□□□□□ -0.91
SHC4-206ENST00000559289 MAP3K4Q9Y6R4 1608 aa9.34□□□□□ -0.91
SHC4-206ENST00000559289 PPRC1Q5VV67 1664 aaKnown RBP9.34□□□□□ -0.91
SHC4-206ENST00000559289 KCNH8Q96L42 1107 aa9.33□□□□□ -0.92
SHC4-206ENST00000559289 CDK11AQ9UQ88 783 aaPredicted RBP9.33□□□□□ -0.92
SHC4-206ENST00000559289 MTUS2Q5JR59 1369 aa9.33□□□□□ -0.92
SHC4-206ENST00000559289 CDC42BPAQ5VT25 1732 aa9.32□□□□□ -0.92
SHC4-206ENST00000559289 SUPT6HQ7KZ85 1726 aaKnown RBP9.32□□□□□ -0.92
SHC4-206ENST00000559289 CDC42BPBQ9Y5S2 1711 aa9.31□□□□□ -0.92
SHC4-206ENST00000559289 FAM69CQ0P6D2 419 aa9.31□□□□□ -0.92
SHC4-206ENST00000559289 TSPOAP1O95153 1857 aa9.31□□□□□ -0.92
SHC4-206ENST00000559289 NCOA2Q15596 1464 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms