RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 IGF1RP08069 1367 aa10.3□□□□□ -0.76
USP3-212ENST00000559276 ADCY10Q96PN6 1610 aa10.27□□□□□ -0.77
USP3-212ENST00000559276 CUL7Q14999 1698 aa10.27□□□□□ -0.77
USP3-212ENST00000559276 KIAA0586Q9BVV6 1533 aa10.27□□□□□ -0.77
USP3-212ENST00000559276 MAPKBP1O60336 1514 aa10.25□□□□□ -0.77
USP3-212ENST00000559276 KIF27Q86VH2 1401 aa10.24□□□□□ -0.77
USP3-212ENST00000559276 DIP2BQ9P265 1576 aa10.23□□□□□ -0.77
USP3-212ENST00000559276 ABCC10Q5T3U5 1492 aa10.23□□□□□ -0.77
USP3-212ENST00000559276 CARMIL1Q5VZK9 1371 aa10.2□□□□□ -0.78
USP3-212ENST00000559276 FAM69CQ0P6D2 419 aa10.18□□□□□ -0.78
USP3-212ENST00000559276 AEBP2Q6ZN18 517 aaPredicted RBP10.16□□□□□ -0.78
USP3-212ENST00000559276 IQGAP2Q13576 1575 aa10.16□□□□□ -0.78
USP3-212ENST00000559276 PTPRGP23470 1445 aa10.16□□□□□ -0.78
USP3-212ENST00000559276 DISP1Q96F81 1524 aa10.15□□□□□ -0.78
USP3-212ENST00000559276 NPM1P06748 294 aaKnown RBP eCLIP10.14□□□□□ -0.79
USP3-212ENST00000559276 TSPOAP1O95153 1857 aa10.14□□□□□ -0.79
USP3-212ENST00000559276 TNIKQ9UKE5 1360 aa10.14□□□□□ -0.79
USP3-212ENST00000559276 ABCC2Q92887 1545 aa10.13□□□□□ -0.79
USP3-212ENST00000559276 PPRC1Q5VV67 1664 aaKnown RBP10.13□□□□□ -0.79
USP3-212ENST00000559276 UHRF1BP1LA0JNW5 1464 aa10.12□□□□□ -0.79
USP3-212ENST00000559276 UGGT2Q9NYU1 1516 aa10.12□□□□□ -0.79
USP3-212ENST00000559276 KDM6BO15054 1643 aa10.11□□□□□ -0.79
USP3-212ENST00000559276 CARMIL2Q6F5E8 1435 aa10.11□□□□□ -0.79
USP3-212ENST00000559276 RAPGEF2Q9Y4G8 1499 aa10.1□□□□□ -0.79
USP3-212ENST00000559276 GLI2P10070 1586 aa10.09□□□□□ -0.79
USP3-212ENST00000559276 TTBK1Q5TCY1 1321 aaPredicted RBP10.09□□□□□ -0.79
USP3-212ENST00000559276 ASXL2Q76L83 1435 aa10.09□□□□□ -0.79
USP3-212ENST00000559276 UACAQ9BZF9 1416 aa10.08□□□□□ -0.8
USP3-212ENST00000559276 KDM5BQ9UGL1 1544 aa10.08□□□□□ -0.8
USP3-212ENST00000559276 KIAA0556O60303 1618 aa10.08□□□□□ -0.8
USP3-212ENST00000559276 PLB1Q6P1J6 1458 aa10.07□□□□□ -0.8
USP3-212ENST00000559276 KDM4FA0A1W2PPD8 638 aa10.07□□□□□ -0.8
USP3-212ENST00000559276 ZCCHC11Q5TAX3 1644 aaKnown RBP10.07□□□□□ -0.8
USP3-212ENST00000559276 CTTNBP2Q8WZ74 1663 aa10.06□□□□□ -0.8
USP3-212ENST00000559276 MAP3K4Q9Y6R4 1608 aa10.06□□□□□ -0.8
USP3-212ENST00000559276 COL17A1Q9UMD9 1497 aaPredicted RBP10.05□□□□□ -0.8
USP3-212ENST00000559276 EPRSP07814 1512 aaKnown RBP10.05□□□□□ -0.8
USP3-212ENST00000559276 PRXQ9BXM0 1461 aa10.03□□□□□ -0.8
USP3-212ENST00000559276 ABCA8O94911 1581 aa10.01□□□□□ -0.81
USP3-212ENST00000559276 WDR7Q9Y4E6 1490 aa9.98□□□□□ -0.81
USP3-212ENST00000559276 GOLGA3Q08378 1498 aa9.97□□□□□ -0.81
USP3-212ENST00000559276 ADGRL1O94910 1474 aa9.96□□□□□ -0.82
USP3-212ENST00000559276 TEX14Q8IWB6 1497 aa9.95□□□□□ -0.82
USP3-212ENST00000559276 CFAP43Q8NDM7 1665 aa9.95□□□□□ -0.82
USP3-212ENST00000559276 MAGI3Q5TCQ9 1506 aa9.94□□□□□ -0.82
USP3-212ENST00000559276 SAMD9Q5K651 1589 aa9.93□□□□□ -0.82
USP3-212ENST00000559276 ATP10BO94823 1461 aa9.91□□□□□ -0.82
USP3-212ENST00000559276 CD109Q6YHK3 1445 aa9.91□□□□□ -0.82
USP3-212ENST00000559276 KCNH8Q96L42 1107 aa9.9□□□□□ -0.82
USP3-212ENST00000559276 P3H3Q8IVL6 736 aa9.89□□□□□ -0.83
USP3-212ENST00000559276 CSRNP3Q8WYN3 585 aa9.89□□□□□ -0.83
USP3-212ENST00000559276 ABCA9Q8IUA7 1624 aa9.88□□□□□ -0.83
USP3-212ENST00000559276 ARAP3Q8WWN8 1544 aa9.87□□□□□ -0.83
USP3-212ENST00000559276 RAPGEF6Q8TEU7 1601 aa9.87□□□□□ -0.83
USP3-212ENST00000559276 ARID3CA6NKF2 412 aa9.87□□□□□ -0.83
USP3-212ENST00000559276 KIF21BO75037 1637 aa9.86□□□□□ -0.83
USP3-212ENST00000559276 NUP153P49790 1475 aaKnown RBP9.85□□□□□ -0.83
USP3-212ENST00000559276 HECW2Q9P2P5 1572 aa9.84□□□□□ -0.83
USP3-212ENST00000559276 FRMPD1Q5SYB0 1578 aa9.83□□□□□ -0.84
USP3-212ENST00000559276 EEA1Q15075 1411 aa9.82□□□□□ -0.84
USP3-212ENST00000559276 FHOD3Q2V2M9 1422 aa9.82□□□□□ -0.84
USP3-212ENST00000559276 ADAMTSL3P82987 1691 aa9.8□□□□□ -0.84
USP3-212ENST00000559276 NEO1Q92859 1461 aa9.79□□□□□ -0.84
USP3-212ENST00000559276 RAPGEF3O95398 923 aa9.79□□□□□ -0.84
USP3-212ENST00000559276 PHLDB1Q86UU1 1377 aa9.78□□□□□ -0.84
USP3-212ENST00000559276 RANGAP1P46060 587 aaPredicted RBP9.78□□□□□ -0.84
USP3-212ENST00000559276 ILDR1Q86SU0 546 aaPredicted RBP9.78□□□□□ -0.84
USP3-212ENST00000559276 EFCAB5A4FU69 1503 aa9.77□□□□□ -0.84
USP3-212ENST00000559276 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.77□□□□□ -0.84
USP3-212ENST00000559276 RICTORQ6R327 1708 aa9.77□□□□□ -0.85
USP3-212ENST00000559276 FAM9AQ8IZU1 332 aaPredicted RBP9.77□□□□□ -0.85
USP3-212ENST00000559276 TTC37Q6PGP7 1564 aa9.76□□□□□ -0.85
USP3-212ENST00000559276 BCORL1Q5H9F3 1711 aa9.76□□□□□ -0.85
USP3-212ENST00000559276 SIGLEC1Q9BZZ2 1709 aa9.76□□□□□ -0.85
USP3-212ENST00000559276 CHIC1Q5VXU3 224 aa9.75□□□□□ -0.85
USP3-212ENST00000559276 PTPRMP28827 1452 aa9.74□□□□□ -0.85
USP3-212ENST00000559276 CDK13Q14004 1512 aaKnown RBP9.74□□□□□ -0.85
USP3-212ENST00000559276 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.74□□□□□ -0.85
USP3-212ENST00000559276 HNRNPUL2Q1KMD3 747 aaKnown RBP9.74□□□□□ -0.85
USP3-212ENST00000559276 ARHGEF40Q8TER5 1519 aa9.73□□□□□ -0.85
USP3-212ENST00000559276 MADDQ8WXG6 1647 aa9.73□□□□□ -0.85
USP3-212ENST00000559276 AKNAQ7Z591 1439 aa9.73□□□□□ -0.85
USP3-212ENST00000559276 FANCAO15360 1455 aa9.72□□□□□ -0.85
USP3-212ENST00000559276 PLEKHD1A6NEE1 506 aa9.72□□□□□ -0.85
USP3-212ENST00000559276 ARHGAP35Q9NRY4 1499 aa9.72□□□□□ -0.85
USP3-212ENST00000559276 ZMYM4Q5VZL5 1548 aa9.72□□□□□ -0.85
USP3-212ENST00000559276 LRRIQ1Q96JM4 1722 aa9.71□□□□□ -0.85
USP3-212ENST00000559276 DENND4BO75064 1496 aaPredicted RBP9.71□□□□□ -0.86
USP3-212ENST00000559276 CFAP74Q9C0B2 1584 aa9.71□□□□□ -0.86
USP3-212ENST00000559276 KIF14Q15058 1648 aa9.69□□□□□ -0.86
USP3-212ENST00000559276 HECW1Q76N89 1606 aa9.69□□□□□ -0.86
USP3-212ENST00000559276 YEATS2Q9ULM3 1422 aa9.69□□□□□ -0.86
USP3-212ENST00000559276 RIMS1Q86UR5 1692 aaKnown RBP9.68□□□□□ -0.86
USP3-212ENST00000559276 PLCH2O75038 1416 aa9.68□□□□□ -0.86
USP3-212ENST00000559276 LMTK3Q96Q04 1460 aa9.67□□□□□ -0.86
USP3-212ENST00000559276 EHMT2Q96KQ7 1210 aa9.67□□□□□ -0.86
USP3-212ENST00000559276 PCF11O94913 1555 aaKnown RBP9.67□□□□□ -0.86
USP3-212ENST00000559276 ZFYVE16Q7Z3T8 1539 aa9.66□□□□□ -0.86
USP3-212ENST00000559276 FMN1Q68DA7 1419 aa9.66□□□□□ -0.86
USP3-212ENST00000559276 POGZQ7Z3K3 1410 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms