RNA–Protein interactions for RNA: ENST00000559099.5

HMG20A-208, Transcript of high mobility group 20A, humanhuman

TSL 5

Gene HMG20A, Length 558 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-208ENST00000559099 ABCA5Q8WWZ7 1642 aa15.08■□□□□ 0
HMG20A-208ENST00000559099 CUX1P39880 1505 aa15.07■□□□□ 0
HMG20A-208ENST00000559099 SOCS7O14512 581 aa15.07■□□□□ 0
HMG20A-208ENST00000559099 ILDR2Q71H61 639 aa15.05■□□□□ -0
HMG20A-208ENST00000559099 ADCY10Q96PN6 1610 aa15.04■□□□□ -0
HMG20A-208ENST00000559099 ADAMTS12P58397 1594 aa15.02■□□□□ -0
HMG20A-208ENST00000559099 PRG4Q92954 1404 aaPredicted RBP15.01□□□□□ -0.01
HMG20A-208ENST00000559099 PPRC1Q5VV67 1664 aaKnown RBP15□□□□□ -0.01
HMG20A-208ENST00000559099 ABCA10Q8WWZ4 1543 aa14.97□□□□□ -0.01
HMG20A-208ENST00000559099 NPM1P06748 294 aaKnown RBP eCLIP14.96□□□□□ -0.01
HMG20A-208ENST00000559099 COL17A1Q9UMD9 1497 aaPredicted RBP14.95□□□□□ -0.02
HMG20A-208ENST00000559099 DISP3Q9P2K9 1392 aa14.88□□□□□ -0.03
HMG20A-208ENST00000559099 FHAD1B1AJZ9 1412 aa14.88□□□□□ -0.03
HMG20A-208ENST00000559099 JPH4Q96JJ6 628 aa14.87□□□□□ -0.03
HMG20A-208ENST00000559099 TOP2BQ02880 1626 aa14.87□□□□□ -0.03
HMG20A-208ENST00000559099 RUSC2Q8N2Y8 1516 aa14.86□□□□□ -0.03
HMG20A-208ENST00000559099 GLI2P10070 1586 aa14.85□□□□□ -0.03
HMG20A-208ENST00000559099 MAP3K4Q9Y6R4 1608 aa14.76□□□□□ -0.05
HMG20A-208ENST00000559099 ERICH3Q5RHP9 1530 aa14.76□□□□□ -0.05
HMG20A-208ENST00000559099 ASXL2Q76L83 1435 aa14.75□□□□□ -0.05
HMG20A-208ENST00000559099 SPATA31D1Q6ZQQ2 1576 aa14.75□□□□□ -0.05
HMG20A-208ENST00000559099 PLB1Q6P1J6 1458 aa14.72□□□□□ -0.05
HMG20A-208ENST00000559099 ABCC2Q92887 1545 aa14.71□□□□□ -0.05
HMG20A-208ENST00000559099 KIF21BO75037 1637 aa14.7□□□□□ -0.06
HMG20A-208ENST00000559099 PCF11O94913 1555 aaKnown RBP14.7□□□□□ -0.06
HMG20A-208ENST00000559099 TEX14Q8IWB6 1497 aa14.69□□□□□ -0.06
HMG20A-208ENST00000559099 PTPRMP28827 1452 aa14.69□□□□□ -0.06
HMG20A-208ENST00000559099 WRNQ14191 1432 aaPredicted RBP eCLIP14.68□□□□□ -0.06
HMG20A-208ENST00000559099 CUL7Q14999 1698 aa14.68□□□□□ -0.06
HMG20A-208ENST00000559099 EPRSP07814 1512 aaKnown RBP14.67□□□□□ -0.06
HMG20A-208ENST00000559099 CERKQ8TCT0 537 aa14.66□□□□□ -0.06
HMG20A-208ENST00000559099 ADAMTSL3P82987 1691 aa14.65□□□□□ -0.06
HMG20A-208ENST00000559099 PTPRGP23470 1445 aa14.62□□□□□ -0.07
HMG20A-208ENST00000559099 KIAA0586Q9BVV6 1533 aa14.61□□□□□ -0.07
HMG20A-208ENST00000559099 UHRF1BP1LA0JNW5 1464 aa14.58□□□□□ -0.08
HMG20A-208ENST00000559099 BIVM-ERCC5R4GMW8 1640 aa14.58□□□□□ -0.08
HMG20A-208ENST00000559099 TTBK1Q5TCY1 1321 aaPredicted RBP14.54□□□□□ -0.08
HMG20A-208ENST00000559099 KDM5BQ9UGL1 1544 aa14.54□□□□□ -0.08
HMG20A-208ENST00000559099 ZCCHC11Q5TAX3 1644 aaKnown RBP14.52□□□□□ -0.08
HMG20A-208ENST00000559099 MADDQ8WXG6 1647 aa14.52□□□□□ -0.08
HMG20A-208ENST00000559099 TNIKQ9UKE5 1360 aa14.52□□□□□ -0.08
HMG20A-208ENST00000559099 HSPA2P54652 639 aa14.52□□□□□ -0.09
HMG20A-208ENST00000559099 MAGI3Q5TCQ9 1506 aa14.51□□□□□ -0.09
HMG20A-208ENST00000559099 UACAQ9BZF9 1416 aa14.49□□□□□ -0.09
HMG20A-208ENST00000559099 BCORL1Q5H9F3 1711 aa14.49□□□□□ -0.09
HMG20A-208ENST00000559099 CFAP43Q8NDM7 1665 aa14.46□□□□□ -0.09
HMG20A-208ENST00000559099 WDR7Q9Y4E6 1490 aa14.46□□□□□ -0.09
HMG20A-208ENST00000559099 CD109Q6YHK3 1445 aa14.44□□□□□ -0.1
HMG20A-208ENST00000559099 RIMS1Q86UR5 1692 aaKnown RBP14.43□□□□□ -0.1
HMG20A-208ENST00000559099 CARMIL2Q6F5E8 1435 aa14.43□□□□□ -0.1
HMG20A-208ENST00000559099 ARAP3Q8WWN8 1544 aa14.42□□□□□ -0.1
HMG20A-208ENST00000559099 DISP1Q96F81 1524 aa14.39□□□□□ -0.11
HMG20A-208ENST00000559099 IQGAP2Q13576 1575 aa14.34□□□□□ -0.11
HMG20A-208ENST00000559099 IGF1RP08069 1367 aa14.33□□□□□ -0.12
HMG20A-208ENST00000559099 STRCQ7RTU9 1775 aa14.32□□□□□ -0.12
HMG20A-208ENST00000559099 FRMPD1Q5SYB0 1578 aa14.32□□□□□ -0.12
HMG20A-208ENST00000559099 ARID4BQ4LE39 1312 aaPredicted RBP14.29□□□□□ -0.12
HMG20A-208ENST00000559099 RAPGEF3O95398 923 aa14.28□□□□□ -0.12
HMG20A-208ENST00000559099 KCNH8Q96L42 1107 aa14.28□□□□□ -0.12
HMG20A-208ENST00000559099 ARHGEF40Q8TER5 1519 aa14.27□□□□□ -0.12
HMG20A-208ENST00000559099 YEATS2Q9ULM3 1422 aa14.27□□□□□ -0.12
HMG20A-208ENST00000559099 PLPPR3Q6T4P5 718 aa14.27□□□□□ -0.13
HMG20A-208ENST00000559099 LTBP4Q8N2S1 1624 aa14.26□□□□□ -0.13
HMG20A-208ENST00000559099 SIGLEC1Q9BZZ2 1709 aa14.26□□□□□ -0.13
HMG20A-208ENST00000559099 PREX1Q8TCU6 1659 aa14.25□□□□□ -0.13
HMG20A-208ENST00000559099 KIAA0556O60303 1618 aa14.25□□□□□ -0.13
HMG20A-208ENST00000559099 IQSEC2Q5JU85 1478 aa14.24□□□□□ -0.13
HMG20A-208ENST00000559099 TTC37Q6PGP7 1564 aa14.23□□□□□ -0.13
HMG20A-208ENST00000559099 UGGT2Q9NYU1 1516 aa14.23□□□□□ -0.13
HMG20A-208ENST00000559099 MED1Q15648 1581 aaPredicted RBP14.22□□□□□ -0.13
HMG20A-208ENST00000559099 PHLDB1Q86UU1 1377 aa14.22□□□□□ -0.13
HMG20A-208ENST00000559099 DMRT2Q9Y5R5 561 aa14.2□□□□□ -0.14
HMG20A-208ENST00000559099 FER1L4A9Z1Z3 1794 aa14.19□□□□□ -0.14
HMG20A-208ENST00000559099 ABCA9Q8IUA7 1624 aa14.19□□□□□ -0.14
HMG20A-208ENST00000559099 ABCA8O94911 1581 aa14.18□□□□□ -0.14
HMG20A-208ENST00000559099 CARMIL1Q5VZK9 1371 aa14.18□□□□□ -0.14
HMG20A-208ENST00000559099 NEO1Q92859 1461 aa14.18□□□□□ -0.14
HMG20A-208ENST00000559099 KIF27Q86VH2 1401 aa14.17□□□□□ -0.14
HMG20A-208ENST00000559099 PTPRTO14522 1441 aa14.16□□□□□ -0.14
HMG20A-208ENST00000559099 FANCAO15360 1455 aa14.15□□□□□ -0.14
HMG20A-208ENST00000559099 RICTORQ6R327 1708 aa14.15□□□□□ -0.14
HMG20A-208ENST00000559099 POGZQ7Z3K3 1410 aa14.14□□□□□ -0.15
HMG20A-208ENST00000559099 ARHGEF12Q9NZN5 1544 aa14.09□□□□□ -0.15
HMG20A-208ENST00000559099 AKNAQ7Z591 1439 aa14.08□□□□□ -0.15
HMG20A-208ENST00000559099 ZMYM4Q5VZL5 1548 aa14.08□□□□□ -0.16
HMG20A-208ENST00000559099 UHRF1BP1Q6BDS2 1440 aa14.07□□□□□ -0.16
HMG20A-208ENST00000559099 UBAP1LF5GYI3 381 aa14.07□□□□□ -0.16
HMG20A-208ENST00000559099 FHOD3Q2V2M9 1422 aa14.07□□□□□ -0.16
HMG20A-208ENST00000559099 ZFYVE16Q7Z3T8 1539 aa14.06□□□□□ -0.16
HMG20A-208ENST00000559099 CEBPAP49715 358 aaPredicted RBP14.06□□□□□ -0.16
HMG20A-208ENST00000559099 MLECQ14165 292 aa14.06□□□□□ -0.16
HMG20A-208ENST00000559099 DENND4BO75064 1496 aaPredicted RBP14.05□□□□□ -0.16
HMG20A-208ENST00000559099 ATP10BO94823 1461 aa14.03□□□□□ -0.16
HMG20A-208ENST00000559099 EFCAB5A4FU69 1503 aa14.03□□□□□ -0.16
HMG20A-208ENST00000559099 NCOA1Q15788 1441 aa14.01□□□□□ -0.17
HMG20A-208ENST00000559099 HSPA1LP34931 641 aa14.01□□□□□ -0.17
HMG20A-208ENST00000559099 ARID3CA6NKF2 412 aa14□□□□□ -0.17
HMG20A-208ENST00000559099 SETD1BQ9UPS6 1966 aaKnown RBP14□□□□□ -0.17
HMG20A-208ENST00000559099 MAGI2Q86UL8 1455 aa13.98□□□□□ -0.17
HMG20A-208ENST00000559099 HECW1Q76N89 1606 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms