RNA–Protein interactions for RNA: ENST00000558806.5

AP3S2-206, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 1 (best)

Gene AP3S2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-206ENST00000558806 IGF1RP08069 1367 aa18.77■□□□□ 0.6
AP3S2-206ENST00000558806 CUL7Q14999 1698 aa18.76■□□□□ 0.59
AP3S2-206ENST00000558806 KIAA0586Q9BVV6 1533 aa18.75■□□□□ 0.59
AP3S2-206ENST00000558806 AEBP2Q6ZN18 517 aaPredicted RBP18.75■□□□□ 0.59
AP3S2-206ENST00000558806 KIF13AQ9H1H9 1805 aa18.72■□□□□ 0.59
AP3S2-206ENST00000558806 NPM1P06748 294 aaKnown RBP eCLIP18.72■□□□□ 0.59
AP3S2-206ENST00000558806 MAPKBP1O60336 1514 aa18.69■□□□□ 0.58
AP3S2-206ENST00000558806 ABCC10Q5T3U5 1492 aa18.67■□□□□ 0.58
AP3S2-206ENST00000558806 ADCY10Q96PN6 1610 aa18.67■□□□□ 0.58
AP3S2-206ENST00000558806 CARMIL1Q5VZK9 1371 aa18.66■□□□□ 0.58
AP3S2-206ENST00000558806 FAM69CQ0P6D2 419 aa18.65■□□□□ 0.58
AP3S2-206ENST00000558806 DIP2BQ9P265 1576 aa18.62■□□□□ 0.57
AP3S2-206ENST00000558806 CARMIL2Q6F5E8 1435 aa18.59■□□□□ 0.57
AP3S2-206ENST00000558806 PTPRGP23470 1445 aa18.58■□□□□ 0.57
AP3S2-206ENST00000558806 IQGAP2Q13576 1575 aa18.56■□□□□ 0.56
AP3S2-206ENST00000558806 TNIKQ9UKE5 1360 aa18.55■□□□□ 0.56
AP3S2-206ENST00000558806 TTBK1Q5TCY1 1321 aaPredicted RBP18.5■□□□□ 0.55
AP3S2-206ENST00000558806 ABCC2Q92887 1545 aa18.5■□□□□ 0.55
AP3S2-206ENST00000558806 RAPGEF2Q9Y4G8 1499 aa18.49■□□□□ 0.55
AP3S2-206ENST00000558806 KDM6BO15054 1643 aa18.48■□□□□ 0.55
AP3S2-206ENST00000558806 DISP1Q96F81 1524 aa18.47■□□□□ 0.55
AP3S2-206ENST00000558806 UHRF1BP1LA0JNW5 1464 aa18.46■□□□□ 0.55
AP3S2-206ENST00000558806 UACAQ9BZF9 1416 aa18.45■□□□□ 0.54
AP3S2-206ENST00000558806 PLB1Q6P1J6 1458 aa18.45■□□□□ 0.54
AP3S2-206ENST00000558806 UGGT2Q9NYU1 1516 aa18.44■□□□□ 0.54
AP3S2-206ENST00000558806 TSPOAP1O95153 1857 aa18.44■□□□□ 0.54
AP3S2-206ENST00000558806 ASXL2Q76L83 1435 aa18.44■□□□□ 0.54
AP3S2-206ENST00000558806 GLI2P10070 1586 aa18.41■□□□□ 0.54
AP3S2-206ENST00000558806 KIAA0556O60303 1618 aa18.39■□□□□ 0.53
AP3S2-206ENST00000558806 KDM5BQ9UGL1 1544 aa18.38■□□□□ 0.53
AP3S2-206ENST00000558806 PPRC1Q5VV67 1664 aaKnown RBP18.33■□□□□ 0.52
AP3S2-206ENST00000558806 EPRSP07814 1512 aaKnown RBP18.33■□□□□ 0.52
AP3S2-206ENST00000558806 CTTNBP2Q8WZ74 1663 aa18.32■□□□□ 0.52
AP3S2-206ENST00000558806 ZCCHC11Q5TAX3 1644 aaKnown RBP18.32■□□□□ 0.52
AP3S2-206ENST00000558806 GOLGA3Q08378 1498 aa18.31■□□□□ 0.52
AP3S2-206ENST00000558806 KDM4FA0A1W2PPD8 638 aa18.3■□□□□ 0.52
AP3S2-206ENST00000558806 MAP3K4Q9Y6R4 1608 aa18.29■□□□□ 0.52
AP3S2-206ENST00000558806 TEX14Q8IWB6 1497 aa18.28■□□□□ 0.52
AP3S2-206ENST00000558806 PRXQ9BXM0 1461 aa18.27■□□□□ 0.52
AP3S2-206ENST00000558806 WDR7Q9Y4E6 1490 aa18.26■□□□□ 0.51
AP3S2-206ENST00000558806 ABCA8O94911 1581 aa18.21■□□□□ 0.51
AP3S2-206ENST00000558806 COL17A1Q9UMD9 1497 aaPredicted RBP18.21■□□□□ 0.51
AP3S2-206ENST00000558806 FAM9AQ8IZU1 332 aaPredicted RBP18.18■□□□□ 0.5
AP3S2-206ENST00000558806 CFAP43Q8NDM7 1665 aa18.15■□□□□ 0.5
AP3S2-206ENST00000558806 CD109Q6YHK3 1445 aa18.15■□□□□ 0.5
AP3S2-206ENST00000558806 ADGRL1O94910 1474 aa18.15■□□□□ 0.5
AP3S2-206ENST00000558806 MAGI3Q5TCQ9 1506 aa18.15■□□□□ 0.5
AP3S2-206ENST00000558806 KCNH8Q96L42 1107 aa18.13■□□□□ 0.49
AP3S2-206ENST00000558806 CSRNP3Q8WYN3 585 aa18.11■□□□□ 0.49
AP3S2-206ENST00000558806 P3H3Q8IVL6 736 aa18.08■□□□□ 0.48
AP3S2-206ENST00000558806 SAMD9Q5K651 1589 aa18.07■□□□□ 0.48
AP3S2-206ENST00000558806 ATP10BO94823 1461 aa18.06■□□□□ 0.48
AP3S2-206ENST00000558806 EEA1Q15075 1411 aa18.06■□□□□ 0.48
AP3S2-206ENST00000558806 ARID3CA6NKF2 412 aa18.03■□□□□ 0.48
AP3S2-206ENST00000558806 RAPGEF6Q8TEU7 1601 aa18.01■□□□□ 0.47
AP3S2-206ENST00000558806 ARAP3Q8WWN8 1544 aa18.01■□□□□ 0.47
AP3S2-206ENST00000558806 ABCA9Q8IUA7 1624 aa18■□□□□ 0.47
AP3S2-206ENST00000558806 PHLDB1Q86UU1 1377 aa17.99■□□□□ 0.47
AP3S2-206ENST00000558806 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.96■□□□□ 0.47
AP3S2-206ENST00000558806 HNRNPUL2Q1KMD3 747 aaKnown RBP17.96■□□□□ 0.47
AP3S2-206ENST00000558806 NUP153P49790 1475 aaKnown RBP17.95■□□□□ 0.46
AP3S2-206ENST00000558806 FHOD3Q2V2M9 1422 aa17.93■□□□□ 0.46
AP3S2-206ENST00000558806 KIF21BO75037 1637 aa17.93■□□□□ 0.46
AP3S2-206ENST00000558806 NEO1Q92859 1461 aa17.93■□□□□ 0.46
AP3S2-206ENST00000558806 HECW2Q9P2P5 1572 aa17.92■□□□□ 0.46
AP3S2-206ENST00000558806 RANGAP1P46060 587 aaPredicted RBP17.92■□□□□ 0.46
AP3S2-206ENST00000558806 EFCAB5A4FU69 1503 aa17.9■□□□□ 0.46
AP3S2-206ENST00000558806 PLEKHD1A6NEE1 506 aa17.87■□□□□ 0.45
AP3S2-206ENST00000558806 RAPGEF3O95398 923 aa17.87■□□□□ 0.45
AP3S2-206ENST00000558806 FRMPD1Q5SYB0 1578 aa17.83■□□□□ 0.44
AP3S2-206ENST00000558806 ILDR1Q86SU0 546 aaPredicted RBP17.81■□□□□ 0.44
AP3S2-206ENST00000558806 CFAP74Q9C0B2 1584 aa17.81■□□□□ 0.44
AP3S2-206ENST00000558806 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.8■□□□□ 0.44
AP3S2-206ENST00000558806 ADAMTSL3P82987 1691 aa17.8■□□□□ 0.44
AP3S2-206ENST00000558806 FANCAO15360 1455 aa17.79■□□□□ 0.44
AP3S2-206ENST00000558806 DENND4BO75064 1496 aaPredicted RBP17.79■□□□□ 0.44
AP3S2-206ENST00000558806 PTPRMP28827 1452 aa17.78■□□□□ 0.44
AP3S2-206ENST00000558806 AKNAQ7Z591 1439 aa17.78■□□□□ 0.44
AP3S2-206ENST00000558806 ARHGEF40Q8TER5 1519 aa17.77■□□□□ 0.43
AP3S2-206ENST00000558806 ARID4BQ4LE39 1312 aaPredicted RBP17.76■□□□□ 0.43
AP3S2-206ENST00000558806 BCORL1Q5H9F3 1711 aa17.76■□□□□ 0.43
AP3S2-206ENST00000558806 RICTORQ6R327 1708 aa17.76■□□□□ 0.43
AP3S2-206ENST00000558806 TTC37Q6PGP7 1564 aa17.76■□□□□ 0.43
AP3S2-206ENST00000558806 UBTFP17480 764 aaKnown RBP17.76■□□□□ 0.43
AP3S2-206ENST00000558806 CDK13Q14004 1512 aaKnown RBP17.75■□□□□ 0.43
AP3S2-206ENST00000558806 FMN1Q68DA7 1419 aa17.74■□□□□ 0.43
AP3S2-206ENST00000558806 HECW1Q76N89 1606 aa17.72■□□□□ 0.43
AP3S2-206ENST00000558806 MADDQ8WXG6 1647 aa17.72■□□□□ 0.43
AP3S2-206ENST00000558806 ZMYM4Q5VZL5 1548 aa17.72■□□□□ 0.43
AP3S2-206ENST00000558806 EHMT2Q96KQ7 1210 aa17.7■□□□□ 0.42
AP3S2-206ENST00000558806 PLCH2O75038 1416 aa17.7■□□□□ 0.42
AP3S2-206ENST00000558806 MAGI2Q86UL8 1455 aa17.69■□□□□ 0.42
AP3S2-206ENST00000558806 ARHGAP35Q9NRY4 1499 aa17.69■□□□□ 0.42
AP3S2-206ENST00000558806 ATP1B4Q9UN42 357 aaPredicted RBP17.69■□□□□ 0.42
AP3S2-206ENST00000558806 CDK11AQ9UQ88 783 aaPredicted RBP17.69■□□□□ 0.42
AP3S2-206ENST00000558806 ZFYVE16Q7Z3T8 1539 aa17.68■□□□□ 0.42
AP3S2-206ENST00000558806 CHIC1Q5VXU3 224 aa17.68■□□□□ 0.42
AP3S2-206ENST00000558806 POGZQ7Z3K3 1410 aa17.68■□□□□ 0.42
AP3S2-206ENST00000558806 SCAPERQ9BY12 1400 aa17.65■□□□□ 0.42
AP3S2-206ENST00000558806 PCF11O94913 1555 aaKnown RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms