RNA–Protein interactions for RNA: ENST00000557517.1

PSMC6-215, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-215ENST00000557517 PBRM1Q86U86 1689 aa18.57■□□□□ 0.56
PSMC6-215ENST00000557517 BIVM-ERCC5R4GMW8 1640 aa18.56■□□□□ 0.56
PSMC6-215ENST00000557517 FHAD1B1AJZ9 1412 aa18.5■□□□□ 0.55
PSMC6-215ENST00000557517 GRIN2AQ12879 1464 aa18.49■□□□□ 0.55
PSMC6-215ENST00000557517 ERCC6L2Q5T890 1561 aa18.47■□□□□ 0.55
PSMC6-215ENST00000557517 ERICH3Q5RHP9 1530 aa18.46■□□□□ 0.55
PSMC6-215ENST00000557517 NUP160Q12769 1436 aa18.46■□□□□ 0.55
PSMC6-215ENST00000557517 CEP170Q5SW79 1584 aa18.41■□□□□ 0.54
PSMC6-215ENST00000557517 IGF1RP08069 1367 aa18.41■□□□□ 0.54
PSMC6-215ENST00000557517 ADAMTS12P58397 1594 aa18.4■□□□□ 0.54
PSMC6-215ENST00000557517 PPP4R3CPQ6ZMV5 832 aa18.4■□□□□ 0.54
PSMC6-215ENST00000557517 SHROOM2Q13796 1616 aa18.39■□□□□ 0.53
PSMC6-215ENST00000557517 KIF13AQ9H1H9 1805 aa18.37■□□□□ 0.53
PSMC6-215ENST00000557517 JPH4Q96JJ6 628 aa18.37■□□□□ 0.53
PSMC6-215ENST00000557517 KIF27Q86VH2 1401 aa18.34■□□□□ 0.53
PSMC6-215ENST00000557517 PRG4Q92954 1404 aaPredicted RBP18.27■□□□□ 0.52
PSMC6-215ENST00000557517 CARMIL1Q5VZK9 1371 aa18.23■□□□□ 0.51
PSMC6-215ENST00000557517 KIAA0586Q9BVV6 1533 aa18.22■□□□□ 0.51
PSMC6-215ENST00000557517 DCAF8L1A6NGE4 600 aa18.21■□□□□ 0.51
PSMC6-215ENST00000557517 ABCC10Q5T3U5 1492 aa18.2■□□□□ 0.5
PSMC6-215ENST00000557517 MAPKBP1O60336 1514 aa18.18■□□□□ 0.5
PSMC6-215ENST00000557517 DIP2BQ9P265 1576 aa18.15■□□□□ 0.5
PSMC6-215ENST00000557517 RUSC2Q8N2Y8 1516 aa18.13■□□□□ 0.49
PSMC6-215ENST00000557517 CUL7Q14999 1698 aa18.12■□□□□ 0.49
PSMC6-215ENST00000557517 FAM69CQ0P6D2 419 aa18.12■□□□□ 0.49
PSMC6-215ENST00000557517 HOXD11P31277 338 aaPredicted RBP18.11■□□□□ 0.49
PSMC6-215ENST00000557517 CNKSR2Q8WXI2 1034 aa18.1■□□□□ 0.49
PSMC6-215ENST00000557517 ADCY10Q96PN6 1610 aa18.09■□□□□ 0.49
PSMC6-215ENST00000557517 NPM1P06748 294 aaKnown RBP eCLIP18.08■□□□□ 0.48
PSMC6-215ENST00000557517 CACNB1Q02641 598 aaPredicted RBP18.08■□□□□ 0.48
PSMC6-215ENST00000557517 KDM6BO15054 1643 aa18.08■□□□□ 0.48
PSMC6-215ENST00000557517 KDM4FA0A1W2PPD8 638 aa18.07■□□□□ 0.48
PSMC6-215ENST00000557517 RAPGEF2Q9Y4G8 1499 aa18.04■□□□□ 0.48
PSMC6-215ENST00000557517 PTPRGP23470 1445 aa18.04■□□□□ 0.48
PSMC6-215ENST00000557517 CARMIL2Q6F5E8 1435 aa18.02■□□□□ 0.48
PSMC6-215ENST00000557517 TNIKQ9UKE5 1360 aa18■□□□□ 0.47
PSMC6-215ENST00000557517 TSPOAP1O95153 1857 aa17.99■□□□□ 0.47
PSMC6-215ENST00000557517 RNF216Q9NWF9 866 aaPredicted RBP17.96■□□□□ 0.47
PSMC6-215ENST00000557517 ILDR1Q86SU0 546 aaPredicted RBP17.95■□□□□ 0.46
PSMC6-215ENST00000557517 IQGAP2Q13576 1575 aa17.94■□□□□ 0.46
PSMC6-215ENST00000557517 DISP1Q96F81 1524 aa17.93■□□□□ 0.46
PSMC6-215ENST00000557517 PRXQ9BXM0 1461 aa17.93■□□□□ 0.46
PSMC6-215ENST00000557517 TTBK1Q5TCY1 1321 aaPredicted RBP17.93■□□□□ 0.46
PSMC6-215ENST00000557517 UGGT2Q9NYU1 1516 aa17.91■□□□□ 0.46
PSMC6-215ENST00000557517 CSRNP3Q8WYN3 585 aa17.9■□□□□ 0.46
PSMC6-215ENST00000557517 PPRC1Q5VV67 1664 aaKnown RBP17.9■□□□□ 0.46
PSMC6-215ENST00000557517 UHRF1BP1LA0JNW5 1464 aa17.88■□□□□ 0.45
PSMC6-215ENST00000557517 UACAQ9BZF9 1416 aa17.88■□□□□ 0.45
PSMC6-215ENST00000557517 GLI2P10070 1586 aa17.87■□□□□ 0.45
PSMC6-215ENST00000557517 ABCC2Q92887 1545 aa17.87■□□□□ 0.45
PSMC6-215ENST00000557517 ADGRL1O94910 1474 aa17.84■□□□□ 0.45
PSMC6-215ENST00000557517 PLB1Q6P1J6 1458 aa17.83■□□□□ 0.45
PSMC6-215ENST00000557517 ASXL2Q76L83 1435 aa17.81■□□□□ 0.44
PSMC6-215ENST00000557517 RNF39Q9H2S5 420 aa17.8■□□□□ 0.44
PSMC6-215ENST00000557517 KDM5BQ9UGL1 1544 aa17.79■□□□□ 0.44
PSMC6-215ENST00000557517 GOLGA3Q08378 1498 aa17.78■□□□□ 0.44
PSMC6-215ENST00000557517 COL17A1Q9UMD9 1497 aaPredicted RBP17.77■□□□□ 0.44
PSMC6-215ENST00000557517 EEA1Q15075 1411 aa17.77■□□□□ 0.44
PSMC6-215ENST00000557517 KIAA0556O60303 1618 aa17.76■□□□□ 0.43
PSMC6-215ENST00000557517 MAP3K4Q9Y6R4 1608 aa17.76■□□□□ 0.43
PSMC6-215ENST00000557517 HECW2Q9P2P5 1572 aa17.75■□□□□ 0.43
PSMC6-215ENST00000557517 EPRSP07814 1512 aaKnown RBP17.72■□□□□ 0.43
PSMC6-215ENST00000557517 NCBP3Q53F19 620 aaKnown RBP17.71■□□□□ 0.43
PSMC6-215ENST00000557517 FAM9AQ8IZU1 332 aaPredicted RBP17.71■□□□□ 0.43
PSMC6-215ENST00000557517 TEX14Q8IWB6 1497 aa17.7■□□□□ 0.42
PSMC6-215ENST00000557517 P3H3Q8IVL6 736 aa17.69■□□□□ 0.42
PSMC6-215ENST00000557517 ZCCHC11Q5TAX3 1644 aaKnown RBP17.65■□□□□ 0.42
PSMC6-215ENST00000557517 CTTNBP2Q8WZ74 1663 aa17.65■□□□□ 0.42
PSMC6-215ENST00000557517 ABCA8O94911 1581 aa17.65■□□□□ 0.42
PSMC6-215ENST00000557517 WDR7Q9Y4E6 1490 aa17.63■□□□□ 0.41
PSMC6-215ENST00000557517 KCNH8Q96L42 1107 aa17.61■□□□□ 0.41
PSMC6-215ENST00000557517 ATP10BO94823 1461 aa17.59■□□□□ 0.41
PSMC6-215ENST00000557517 C1QBPQ07021 282 aaKnown RBP17.56■□□□□ 0.4
PSMC6-215ENST00000557517 MAGI3Q5TCQ9 1506 aa17.56■□□□□ 0.4
PSMC6-215ENST00000557517 SAMD9Q5K651 1589 aa17.55■□□□□ 0.4
PSMC6-215ENST00000557517 RANGAP1P46060 587 aaPredicted RBP17.55■□□□□ 0.4
PSMC6-215ENST00000557517 CD109Q6YHK3 1445 aa17.55■□□□□ 0.4
PSMC6-215ENST00000557517 CFAP43Q8NDM7 1665 aa17.55■□□□□ 0.4
PSMC6-215ENST00000557517 ARID3CA6NKF2 412 aa17.54■□□□□ 0.4
PSMC6-215ENST00000557517 UBTFP17480 764 aaKnown RBP17.51■□□□□ 0.39
PSMC6-215ENST00000557517 KIF21BO75037 1637 aa17.5■□□□□ 0.39
PSMC6-215ENST00000557517 FHOD3Q2V2M9 1422 aa17.48■□□□□ 0.39
PSMC6-215ENST00000557517 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.48■□□□□ 0.39
PSMC6-215ENST00000557517 HNRNPUL2Q1KMD3 747 aaKnown RBP17.48■□□□□ 0.39
PSMC6-215ENST00000557517 FBXO41Q8TF61 875 aa17.48■□□□□ 0.39
PSMC6-215ENST00000557517 NUP153P49790 1475 aaKnown RBP17.46■□□□□ 0.39
PSMC6-215ENST00000557517 PLEKHD1A6NEE1 506 aa17.46■□□□□ 0.39
PSMC6-215ENST00000557517 ARAP3Q8WWN8 1544 aa17.44■□□□□ 0.38
PSMC6-215ENST00000557517 PHLDB1Q86UU1 1377 aa17.43■□□□□ 0.38
PSMC6-215ENST00000557517 EHMT2Q96KQ7 1210 aa17.43■□□□□ 0.38
PSMC6-215ENST00000557517 EFCAB5A4FU69 1503 aa17.42■□□□□ 0.38
PSMC6-215ENST00000557517 RAPGEF6Q8TEU7 1601 aa17.42■□□□□ 0.38
PSMC6-215ENST00000557517 ADAMTSL3P82987 1691 aa17.41■□□□□ 0.38
PSMC6-215ENST00000557517 PTPRMP28827 1452 aa17.37■□□□□ 0.37
PSMC6-215ENST00000557517 NPM3O75607 178 aaKnown RBP17.36■□□□□ 0.37
PSMC6-215ENST00000557517 ARHGAP35Q9NRY4 1499 aa17.36■□□□□ 0.37
PSMC6-215ENST00000557517 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.35■□□□□ 0.37
PSMC6-215ENST00000557517 FMN1Q68DA7 1419 aa17.35■□□□□ 0.37
PSMC6-215ENST00000557517 ABCA9Q8IUA7 1624 aa17.35■□□□□ 0.37
PSMC6-215ENST00000557517 NEO1Q92859 1461 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms