RNA–Protein interactions for RNA: ENST00000557418.1

FOXA1-205, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 392 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-205ENST00000557418 CARMIL1Q5VZK9 1371 aa35.89■■■■□ 3.34
FOXA1-205ENST00000557418 PRG4Q92954 1404 aaPredicted RBP35.88■■■■□ 3.33
FOXA1-205ENST00000557418 RUSC2Q8N2Y8 1516 aa35.81■■■■□ 3.32
FOXA1-205ENST00000557418 KIAA0586Q9BVV6 1533 aa35.78■■■■□ 3.32
FOXA1-205ENST00000557418 RAPGEF2Q9Y4G8 1499 aa35.59■■■■□ 3.29
FOXA1-205ENST00000557418 NPM1P06748 294 aaKnown RBP eCLIP35.5■■■■□ 3.27
FOXA1-205ENST00000557418 IQGAP2Q13576 1575 aa35.47■■■■□ 3.27
FOXA1-205ENST00000557418 CARMIL2Q6F5E8 1435 aa35.47■■■■□ 3.27
FOXA1-205ENST00000557418 CHIC1Q5VXU3 224 aa35.45■■■■□ 3.27
FOXA1-205ENST00000557418 TTBK1Q5TCY1 1321 aaPredicted RBP35.43■■■■□ 3.26
FOXA1-205ENST00000557418 PTPRGP23470 1445 aa35.42■■■■□ 3.26
FOXA1-205ENST00000557418 TNIKQ9UKE5 1360 aa35.38■■■■□ 3.25
FOXA1-205ENST00000557418 ADCY10Q96PN6 1610 aa35.32■■■■□ 3.24
FOXA1-205ENST00000557418 PRXQ9BXM0 1461 aa35.3■■■■□ 3.24
FOXA1-205ENST00000557418 CSRNP3Q8WYN3 585 aa35.29■■■■□ 3.24
FOXA1-205ENST00000557418 DISP1Q96F81 1524 aa35.27■■■■□ 3.24
FOXA1-205ENST00000557418 UGGT2Q9NYU1 1516 aa35.27■■■■□ 3.24
FOXA1-205ENST00000557418 FAM69CQ0P6D2 419 aa35.2■■■■□ 3.23
FOXA1-205ENST00000557418 CTTNBP2Q8WZ74 1663 aa35.2■■■■□ 3.23
FOXA1-205ENST00000557418 MAPKBP1O60336 1514 aa35.19■■■■□ 3.22
FOXA1-205ENST00000557418 KIF13AQ9H1H9 1805 aa35.18■■■■□ 3.22
FOXA1-205ENST00000557418 ABCC10Q5T3U5 1492 aa35.14■■■■□ 3.22
FOXA1-205ENST00000557418 EEA1Q15075 1411 aa35.14■■■■□ 3.22
FOXA1-205ENST00000557418 UACAQ9BZF9 1416 aa35.13■■■■□ 3.21
FOXA1-205ENST00000557418 KIAA0556O60303 1618 aa35.12■■■■□ 3.21
FOXA1-205ENST00000557418 FAM9AQ8IZU1 332 aaPredicted RBP35.1■■■■□ 3.21
FOXA1-205ENST00000557418 ABCC2Q92887 1545 aa35.09■■■■□ 3.21
FOXA1-205ENST00000557418 GOLGA3Q08378 1498 aa35.09■■■■□ 3.21
FOXA1-205ENST00000557418 UHRF1BP1LA0JNW5 1464 aa35.08■■■■□ 3.21
FOXA1-205ENST00000557418 DIP2BQ9P265 1576 aa35.01■■■■□ 3.2
FOXA1-205ENST00000557418 ASXL2Q76L83 1435 aa34.95■■■■□ 3.19
FOXA1-205ENST00000557418 PLB1Q6P1J6 1458 aa34.93■■■■□ 3.18
FOXA1-205ENST00000557418 P3H3Q8IVL6 736 aa34.92■■■■□ 3.18
FOXA1-205ENST00000557418 KDM5BQ9UGL1 1544 aa34.91■■■■□ 3.18
FOXA1-205ENST00000557418 TSPOAP1O95153 1857 aa34.84■■■■□ 3.17
FOXA1-205ENST00000557418 ZCCHC11Q5TAX3 1644 aaKnown RBP34.82■■■■□ 3.16
FOXA1-205ENST00000557418 RANGAP1P46060 587 aaPredicted RBP34.81■■■■□ 3.16
FOXA1-205ENST00000557418 ABCA8O94911 1581 aa34.79■■■■□ 3.16
FOXA1-205ENST00000557418 GLI2P10070 1586 aa34.75■■■■□ 3.15
FOXA1-205ENST00000557418 KIF21BO75037 1637 aa34.75■■■■□ 3.15
FOXA1-205ENST00000557418 EPRSP07814 1512 aaKnown RBP34.71■■■■□ 3.15
FOXA1-205ENST00000557418 SAMD9Q5K651 1589 aa34.71■■■■□ 3.15
FOXA1-205ENST00000557418 EHMT2Q96KQ7 1210 aa34.7■■■■□ 3.15
FOXA1-205ENST00000557418 UBTFP17480 764 aaKnown RBP34.68■■■■□ 3.14
FOXA1-205ENST00000557418 WDR7Q9Y4E6 1490 aa34.66■■■■□ 3.14
FOXA1-205ENST00000557418 KCNH8Q96L42 1107 aa34.65■■■■□ 3.14
FOXA1-205ENST00000557418 ARID3CA6NKF2 412 aa34.64■■■■□ 3.14
FOXA1-205ENST00000557418 KDM6BO15054 1643 aa34.62■■■■□ 3.13
FOXA1-205ENST00000557418 ATP10BO94823 1461 aa34.57■■■■□ 3.12
FOXA1-205ENST00000557418 AEBP2Q6ZN18 517 aaPredicted RBP34.56■■■■□ 3.12
FOXA1-205ENST00000557418 FHOD3Q2V2M9 1422 aa34.55■■■■□ 3.12
FOXA1-205ENST00000557418 MAP3K4Q9Y6R4 1608 aa34.55■■■■□ 3.12
FOXA1-205ENST00000557418 PPRC1Q5VV67 1664 aaKnown RBP34.55■■■■□ 3.12
FOXA1-205ENST00000557418 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.52■■■■□ 3.12
FOXA1-205ENST00000557418 HNRNPUL2Q1KMD3 747 aaKnown RBP34.52■■■■□ 3.12
FOXA1-205ENST00000557418 RAPGEF6Q8TEU7 1601 aa34.52■■■■□ 3.12
FOXA1-205ENST00000557418 EFCAB5A4FU69 1503 aa34.5■■■■□ 3.11
FOXA1-205ENST00000557418 TEX14Q8IWB6 1497 aa34.49■■■■□ 3.11
FOXA1-205ENST00000557418 CD109Q6YHK3 1445 aa34.47■■■■□ 3.11
FOXA1-205ENST00000557418 CFAP43Q8NDM7 1665 aa34.4■■■■□ 3.1
FOXA1-205ENST00000557418 NUP153P49790 1475 aaKnown RBP34.39■■■■□ 3.1
FOXA1-205ENST00000557418 MAGI3Q5TCQ9 1506 aa34.35■■■■□ 3.09
FOXA1-205ENST00000557418 COL17A1Q9UMD9 1497 aaPredicted RBP34.35■■■■□ 3.09
FOXA1-205ENST00000557418 PLEKHD1A6NEE1 506 aa34.34■■■■□ 3.09
FOXA1-205ENST00000557418 ARHGAP35Q9NRY4 1499 aa34.27■■■■□ 3.08
FOXA1-205ENST00000557418 ATP1B4Q9UN42 357 aaPredicted RBP34.27■■■■□ 3.08
FOXA1-205ENST00000557418 FMN1Q68DA7 1419 aa34.24■■■■□ 3.07
FOXA1-205ENST00000557418 ABCA9Q8IUA7 1624 aa34.22■■■■□ 3.07
FOXA1-205ENST00000557418 KDM4FA0A1W2PPD8 638 aa34.14■■■■□ 3.06
FOXA1-205ENST00000557418 PHLDB1Q86UU1 1377 aa34.13■■■■□ 3.05
FOXA1-205ENST00000557418 CDK13Q14004 1512 aaKnown RBP34.1■■■■□ 3.05
FOXA1-205ENST00000557418 CDK11AQ9UQ88 783 aaPredicted RBP34.09■■■■□ 3.05
FOXA1-205ENST00000557418 ARAP3Q8WWN8 1544 aa34.08■■■■□ 3.05
FOXA1-205ENST00000557418 HECW1Q76N89 1606 aa34.07■■■■□ 3.04
FOXA1-205ENST00000557418 NEO1Q92859 1461 aa34.03■■■■□ 3.04
FOXA1-205ENST00000557418 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.99■■■■□ 3.03
FOXA1-205ENST00000557418 LOC105371045A0A1W2PR82 267 aa33.98■■■■□ 3.03
FOXA1-205ENST00000557418 RAPGEF3O95398 923 aa33.98■■■■□ 3.03
FOXA1-205ENST00000557418 CLIP1P30622 1438 aa33.96■■■■□ 3.03
FOXA1-205ENST00000557418 ADGRL1O94910 1474 aa33.91■■■■□ 3.02
FOXA1-205ENST00000557418 CASKIN1Q8WXD9 1431 aa33.91■■■■□ 3.02
FOXA1-205ENST00000557418 TTC37Q6PGP7 1564 aa33.9■■■■□ 3.02
FOXA1-205ENST00000557418 FANCAO15360 1455 aa33.89■■■■□ 3.02
FOXA1-205ENST00000557418 AKNAQ7Z591 1439 aa33.89■■■■□ 3.02
FOXA1-205ENST00000557418 TROQ12816 1431 aaPredicted RBP33.86■■■■□ 3.01
FOXA1-205ENST00000557418 LRRIQ1Q96JM4 1722 aa33.84■■■■□ 3.01
FOXA1-205ENST00000557418 PLCH2O75038 1416 aa33.84■■■■□ 3.01
FOXA1-205ENST00000557418 CFAP74Q9C0B2 1584 aa33.83■■■■□ 3.01
FOXA1-205ENST00000557418 DENND4BO75064 1496 aaPredicted RBP33.82■■■■□ 3.01
FOXA1-205ENST00000557418 PCF11O94913 1555 aaKnown RBP33.82■■■■□ 3
FOXA1-205ENST00000557418 CCDC18Q5T9S5 1454 aa33.81■■■■□ 3
FOXA1-205ENST00000557418 EFCAB2Q5VUJ9 269 aa33.8■■■■□ 3
FOXA1-205ENST00000557418 FYCO1Q9BQS8 1478 aa33.76■■■■□ 3
FOXA1-205ENST00000557418 KIF14Q15058 1648 aa33.76■■■■□ 3
FOXA1-205ENST00000557418 FRMPD1Q5SYB0 1578 aa33.74■■■□□ 2.99
FOXA1-205ENST00000557418 MYO5CQ9NQX4 1742 aa33.73■■■□□ 2.99
FOXA1-205ENST00000557418 SCAPERQ9BY12 1400 aa33.7■■■□□ 2.99
FOXA1-205ENST00000557418 RICTORQ6R327 1708 aa33.7■■■□□ 2.98
FOXA1-205ENST00000557418 ARID4BQ4LE39 1312 aaPredicted RBP33.66■■■□□ 2.98
FOXA1-205ENST00000557418 CEP162Q5TB80 1403 aa33.66■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms