RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-231ENST00000557336 NUP160Q12769 1436 aa19.95■□□□□ 0.78
HNRNPC-231ENST00000557336 ERCC6L2Q5T890 1561 aa19.94■□□□□ 0.78
HNRNPC-231ENST00000557336 CEP170Q5SW79 1584 aa19.93■□□□□ 0.78
HNRNPC-231ENST00000557336 FHAD1B1AJZ9 1412 aa19.92■□□□□ 0.78
HNRNPC-231ENST00000557336 ERICH3Q5RHP9 1530 aa19.88■□□□□ 0.77
HNRNPC-231ENST00000557336 PPP4R3CPQ6ZMV5 832 aa19.83■□□□□ 0.77
HNRNPC-231ENST00000557336 SHROOM2Q13796 1616 aa19.83■□□□□ 0.76
HNRNPC-231ENST00000557336 MAPK8IP2Q13387 824 aaPredicted RBP19.81■□□□□ 0.76
HNRNPC-231ENST00000557336 JPH4Q96JJ6 628 aa19.74■□□□□ 0.75
HNRNPC-231ENST00000557336 PRG4Q92954 1404 aaPredicted RBP19.74■□□□□ 0.75
HNRNPC-231ENST00000557336 IGF1RP08069 1367 aa19.72■□□□□ 0.75
HNRNPC-231ENST00000557336 RUSC2Q8N2Y8 1516 aa19.67■□□□□ 0.74
HNRNPC-231ENST00000557336 KIF27Q86VH2 1401 aa19.63■□□□□ 0.73
HNRNPC-231ENST00000557336 KIAA0586Q9BVV6 1533 aa19.6■□□□□ 0.73
HNRNPC-231ENST00000557336 SCAF1Q9H7N4 1312 aaKnown RBP19.56■□□□□ 0.72
HNRNPC-231ENST00000557336 CUL7Q14999 1698 aa19.54■□□□□ 0.72
HNRNPC-231ENST00000557336 CARMIL1Q5VZK9 1371 aa19.54■□□□□ 0.72
HNRNPC-231ENST00000557336 KIF13AQ9H1H9 1805 aa19.52■□□□□ 0.72
HNRNPC-231ENST00000557336 ADCY10Q96PN6 1610 aa19.51■□□□□ 0.71
HNRNPC-231ENST00000557336 ABCC10Q5T3U5 1492 aa19.48■□□□□ 0.71
HNRNPC-231ENST00000557336 MAPKBP1O60336 1514 aa19.46■□□□□ 0.71
HNRNPC-231ENST00000557336 FAM69CQ0P6D2 419 aa19.46■□□□□ 0.71
HNRNPC-231ENST00000557336 NPM1P06748 294 aaKnown RBP eCLIP19.44■□□□□ 0.7
HNRNPC-231ENST00000557336 PTPRGP23470 1445 aa19.42■□□□□ 0.7
HNRNPC-231ENST00000557336 DIP2BQ9P265 1576 aa19.4■□□□□ 0.7
HNRNPC-231ENST00000557336 POTEDQ86YR6 584 aa19.38■□□□□ 0.69
HNRNPC-231ENST00000557336 DMRT2Q9Y5R5 561 aa19.38■□□□□ 0.69
HNRNPC-231ENST00000557336 TNIKQ9UKE5 1360 aa19.37■□□□□ 0.69
HNRNPC-231ENST00000557336 IQGAP2Q13576 1575 aa19.36■□□□□ 0.69
HNRNPC-231ENST00000557336 DISP1Q96F81 1524 aa19.35■□□□□ 0.69
HNRNPC-231ENST00000557336 TTBK1Q5TCY1 1321 aaPredicted RBP19.35■□□□□ 0.69
HNRNPC-231ENST00000557336 CARMIL2Q6F5E8 1435 aa19.34■□□□□ 0.69
HNRNPC-231ENST00000557336 RAPGEF2Q9Y4G8 1499 aa19.33■□□□□ 0.68
HNRNPC-231ENST00000557336 ABCC2Q92887 1545 aa19.31■□□□□ 0.68
HNRNPC-231ENST00000557336 UGGT2Q9NYU1 1516 aa19.29■□□□□ 0.68
HNRNPC-231ENST00000557336 UHRF1BP1LA0JNW5 1464 aa19.28■□□□□ 0.68
HNRNPC-231ENST00000557336 KCNA4P22459 653 aa19.28■□□□□ 0.68
HNRNPC-231ENST00000557336 UACAQ9BZF9 1416 aa19.26■□□□□ 0.67
HNRNPC-231ENST00000557336 ASXL2Q76L83 1435 aa19.25■□□□□ 0.67
HNRNPC-231ENST00000557336 CNKSR2Q8WXI2 1034 aa19.23■□□□□ 0.67
HNRNPC-231ENST00000557336 PLB1Q6P1J6 1458 aa19.22■□□□□ 0.67
HNRNPC-231ENST00000557336 KDM5BQ9UGL1 1544 aa19.21■□□□□ 0.67
HNRNPC-231ENST00000557336 TSPOAP1O95153 1857 aa19.2■□□□□ 0.66
HNRNPC-231ENST00000557336 KIAA0556O60303 1618 aa19.2■□□□□ 0.66
HNRNPC-231ENST00000557336 GLI2P10070 1586 aa19.19■□□□□ 0.66
HNRNPC-231ENST00000557336 KDM6BO15054 1643 aa19.19■□□□□ 0.66
HNRNPC-231ENST00000557336 PRXQ9BXM0 1461 aa19.18■□□□□ 0.66
HNRNPC-231ENST00000557336 PPRC1Q5VV67 1664 aaKnown RBP19.17■□□□□ 0.66
HNRNPC-231ENST00000557336 KDM4FA0A1W2PPD8 638 aa19.16■□□□□ 0.66
HNRNPC-231ENST00000557336 EPRSP07814 1512 aaKnown RBP19.15■□□□□ 0.66
HNRNPC-231ENST00000557336 COL17A1Q9UMD9 1497 aaPredicted RBP19.13■□□□□ 0.65
HNRNPC-231ENST00000557336 ZCCHC11Q5TAX3 1644 aaKnown RBP19.11■□□□□ 0.65
HNRNPC-231ENST00000557336 NCBP3Q53F19 620 aaKnown RBP19.09■□□□□ 0.65
HNRNPC-231ENST00000557336 CTTNBP2Q8WZ74 1663 aa19.08■□□□□ 0.65
HNRNPC-231ENST00000557336 MAP3K4Q9Y6R4 1608 aa19.07■□□□□ 0.64
HNRNPC-231ENST00000557336 ABCA8O94911 1581 aa19.06■□□□□ 0.64
HNRNPC-231ENST00000557336 GOLGA3Q08378 1498 aa19.06■□□□□ 0.64
HNRNPC-231ENST00000557336 WDR7Q9Y4E6 1490 aa19.04■□□□□ 0.64
HNRNPC-231ENST00000557336 NPM3O75607 178 aaKnown RBP19.02■□□□□ 0.64
HNRNPC-231ENST00000557336 CSRNP3Q8WYN3 585 aa19.01■□□□□ 0.63
HNRNPC-231ENST00000557336 P3H3Q8IVL6 736 aa18.98■□□□□ 0.63
HNRNPC-231ENST00000557336 TEX14Q8IWB6 1497 aa18.97■□□□□ 0.63
HNRNPC-231ENST00000557336 KCNH8Q96L42 1107 aa18.96■□□□□ 0.63
HNRNPC-231ENST00000557336 CD109Q6YHK3 1445 aa18.94■□□□□ 0.62
HNRNPC-231ENST00000557336 ATP10BO94823 1461 aa18.94■□□□□ 0.62
HNRNPC-231ENST00000557336 MAGI3Q5TCQ9 1506 aa18.94■□□□□ 0.62
HNRNPC-231ENST00000557336 ADGRL1O94910 1474 aa18.91■□□□□ 0.62
HNRNPC-231ENST00000557336 ARID3CA6NKF2 412 aa18.91■□□□□ 0.62
HNRNPC-231ENST00000557336 HOXD11P31277 338 aaPredicted RBP18.91■□□□□ 0.62
HNRNPC-231ENST00000557336 SAMD9Q5K651 1589 aa18.9■□□□□ 0.62
HNRNPC-231ENST00000557336 RNF216Q9NWF9 866 aaPredicted RBP18.9■□□□□ 0.62
HNRNPC-231ENST00000557336 CFAP43Q8NDM7 1665 aa18.88■□□□□ 0.61
HNRNPC-231ENST00000557336 EEA1Q15075 1411 aa18.85■□□□□ 0.61
HNRNPC-231ENST00000557336 FAM9AQ8IZU1 332 aaPredicted RBP18.82■□□□□ 0.6
HNRNPC-231ENST00000557336 NUP153P49790 1475 aaKnown RBP18.8■□□□□ 0.6
HNRNPC-231ENST00000557336 ARAP3Q8WWN8 1544 aa18.79■□□□□ 0.6
HNRNPC-231ENST00000557336 RAPGEF6Q8TEU7 1601 aa18.79■□□□□ 0.6
HNRNPC-231ENST00000557336 RANGAP1P46060 587 aaPredicted RBP18.79■□□□□ 0.6
HNRNPC-231ENST00000557336 FHOD3Q2V2M9 1422 aa18.79■□□□□ 0.6
HNRNPC-231ENST00000557336 ABCA9Q8IUA7 1624 aa18.78■□□□□ 0.6
HNRNPC-231ENST00000557336 KIF21BO75037 1637 aa18.71■□□□□ 0.59
HNRNPC-231ENST00000557336 PHLDB1Q86UU1 1377 aa18.71■□□□□ 0.59
HNRNPC-231ENST00000557336 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.71■□□□□ 0.59
HNRNPC-231ENST00000557336 RAPGEF3O95398 923 aa18.71■□□□□ 0.59
HNRNPC-231ENST00000557336 HNRNPUL2Q1KMD3 747 aaKnown RBP18.71■□□□□ 0.59
HNRNPC-231ENST00000557336 NEO1Q92859 1461 aa18.69■□□□□ 0.58
HNRNPC-231ENST00000557336 EFCAB5A4FU69 1503 aa18.66■□□□□ 0.58
HNRNPC-231ENST00000557336 FRMPD1Q5SYB0 1578 aa18.65■□□□□ 0.58
HNRNPC-231ENST00000557336 PLEKHD1A6NEE1 506 aa18.65■□□□□ 0.58
HNRNPC-231ENST00000557336 HECW2Q9P2P5 1572 aa18.64■□□□□ 0.58
HNRNPC-231ENST00000557336 EHMT2Q96KQ7 1210 aa18.62■□□□□ 0.57
HNRNPC-231ENST00000557336 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.62■□□□□ 0.571e-13■■■□□ 15.2
HNRNPC-231ENST00000557336 CDK13Q14004 1512 aaKnown RBP18.6■□□□□ 0.57
HNRNPC-231ENST00000557336 ARHGAP35Q9NRY4 1499 aa18.58■□□□□ 0.57
HNRNPC-231ENST00000557336 AKNAQ7Z591 1439 aa18.58■□□□□ 0.57
HNRNPC-231ENST00000557336 TTC37Q6PGP7 1564 aa18.57■□□□□ 0.56
HNRNPC-231ENST00000557336 UBTFP17480 764 aaKnown RBP18.57■□□□□ 0.56
HNRNPC-231ENST00000557336 ADAMTSL3P82987 1691 aa18.57■□□□□ 0.56
HNRNPC-231ENST00000557336 DCAF8L1A6NGE4 600 aa18.56■□□□□ 0.56
HNRNPC-231ENST00000557336 FANCAO15360 1455 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms