RNA–Protein interactions for RNA: ENST00000556761.1

ZFYVE1-209, Transcript of zinc finger FYVE-type containing 1, humanhuman

TSL 4

Gene ZFYVE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE1-209ENST00000556761 CARMIL1Q5VZK9 1371 aa32.8■■■□□ 2.84
ZFYVE1-209ENST00000556761 PRG4Q92954 1404 aaPredicted RBP32.79■■■□□ 2.84
ZFYVE1-209ENST00000556761 KIAA0586Q9BVV6 1533 aa32.76■■■□□ 2.83
ZFYVE1-209ENST00000556761 TRHP20396 242 aaPredicted RBP32.69■■■□□ 2.82
ZFYVE1-209ENST00000556761 RAPGEF2Q9Y4G8 1499 aa32.54■■■□□ 2.8
ZFYVE1-209ENST00000556761 IQGAP2Q13576 1575 aa32.46■■■□□ 2.79
ZFYVE1-209ENST00000556761 PRXQ9BXM0 1461 aa32.38■■■□□ 2.77
ZFYVE1-209ENST00000556761 ADCY10Q96PN6 1610 aa32.37■■■□□ 2.77
ZFYVE1-209ENST00000556761 CARMIL2Q6F5E8 1435 aa32.36■■■□□ 2.77
ZFYVE1-209ENST00000556761 PTPRGP23470 1445 aa32.34■■■□□ 2.77
ZFYVE1-209ENST00000556761 DISP1Q96F81 1524 aa32.34■■■□□ 2.77
ZFYVE1-209ENST00000556761 TNIKQ9UKE5 1360 aa32.33■■■□□ 2.77
ZFYVE1-209ENST00000556761 UGGT2Q9NYU1 1516 aa32.33■■■□□ 2.77
ZFYVE1-209ENST00000556761 MAPKBP1O60336 1514 aa32.26■■■□□ 2.75
ZFYVE1-209ENST00000556761 NPM1P06748 294 aaKnown RBP eCLIP32.24■■■□□ 2.75
ZFYVE1-209ENST00000556761 KIF13AQ9H1H9 1805 aa32.21■■■□□ 2.75
ZFYVE1-209ENST00000556761 CTTNBP2Q8WZ74 1663 aa32.2■■■□□ 2.74
ZFYVE1-209ENST00000556761 CSRNP3Q8WYN3 585 aa32.19■■■□□ 2.74
ZFYVE1-209ENST00000556761 ABCC10Q5T3U5 1492 aa32.17■■■□□ 2.74
ZFYVE1-209ENST00000556761 KIAA0556O60303 1618 aa32.17■■■□□ 2.74
ZFYVE1-209ENST00000556761 TTBK1Q5TCY1 1321 aaPredicted RBP32.16■■■□□ 2.74
ZFYVE1-209ENST00000556761 UHRF1BP1LA0JNW5 1464 aa32.16■■■□□ 2.74
ZFYVE1-209ENST00000556761 EEA1Q15075 1411 aa32.13■■■□□ 2.73
ZFYVE1-209ENST00000556761 ABCC2Q92887 1545 aa32.12■■■□□ 2.73
ZFYVE1-209ENST00000556761 UACAQ9BZF9 1416 aa32.12■■■□□ 2.73
ZFYVE1-209ENST00000556761 DIP2BQ9P265 1576 aa32.08■■■□□ 2.73
ZFYVE1-209ENST00000556761 FAM69CQ0P6D2 419 aa32.08■■■□□ 2.73
ZFYVE1-209ENST00000556761 GOLGA3Q08378 1498 aa32.05■■■□□ 2.72
ZFYVE1-209ENST00000556761 CHIC1Q5VXU3 224 aa32.02■■■□□ 2.72
ZFYVE1-209ENST00000556761 KDM5BQ9UGL1 1544 aa32■■■□□ 2.71
ZFYVE1-209ENST00000556761 ASXL2Q76L83 1435 aa31.96■■■□□ 2.71
ZFYVE1-209ENST00000556761 PLB1Q6P1J6 1458 aa31.94■■■□□ 2.7
ZFYVE1-209ENST00000556761 FAM9AQ8IZU1 332 aaPredicted RBP31.91■■■□□ 2.7
ZFYVE1-209ENST00000556761 ABCA8O94911 1581 aa31.89■■■□□ 2.7
ZFYVE1-209ENST00000556761 ZCCHC11Q5TAX3 1644 aaKnown RBP31.87■■■□□ 2.69
ZFYVE1-209ENST00000556761 GLI2P10070 1586 aa31.85■■■□□ 2.69
ZFYVE1-209ENST00000556761 KIF21BO75037 1637 aa31.84■■■□□ 2.69
ZFYVE1-209ENST00000556761 SAMD9Q5K651 1589 aa31.84■■■□□ 2.69
ZFYVE1-209ENST00000556761 EPRSP07814 1512 aaKnown RBP31.79■■■□□ 2.68
ZFYVE1-209ENST00000556761 P3H3Q8IVL6 736 aa31.78■■■□□ 2.68
ZFYVE1-209ENST00000556761 TSPOAP1O95153 1857 aa31.76■■■□□ 2.67
ZFYVE1-209ENST00000556761 WDR7Q9Y4E6 1490 aa31.72■■■□□ 2.67
ZFYVE1-209ENST00000556761 PPRC1Q5VV67 1664 aaKnown RBP31.71■■■□□ 2.67
ZFYVE1-209ENST00000556761 MAP3K4Q9Y6R4 1608 aa31.66■■■□□ 2.66
ZFYVE1-209ENST00000556761 ATP10BO94823 1461 aa31.64■■■□□ 2.66
ZFYVE1-209ENST00000556761 KDM6BO15054 1643 aa31.64■■■□□ 2.65
ZFYVE1-209ENST00000556761 FHOD3Q2V2M9 1422 aa31.6■■■□□ 2.65
ZFYVE1-209ENST00000556761 RANGAP1P46060 587 aaPredicted RBP31.6■■■□□ 2.65
ZFYVE1-209ENST00000556761 RAPGEF6Q8TEU7 1601 aa31.58■■■□□ 2.65
ZFYVE1-209ENST00000556761 EFCAB5A4FU69 1503 aa31.58■■■□□ 2.65
ZFYVE1-209ENST00000556761 ARID3CA6NKF2 412 aa31.52■■■□□ 2.64
ZFYVE1-209ENST00000556761 UBTFP17480 764 aaKnown RBP31.52■■■□□ 2.64
ZFYVE1-209ENST00000556761 KCNH8Q96L42 1107 aa31.52■■■□□ 2.64
ZFYVE1-209ENST00000556761 NUP153P49790 1475 aaKnown RBP31.52■■■□□ 2.64
ZFYVE1-209ENST00000556761 TEX14Q8IWB6 1497 aa31.51■■■□□ 2.63
ZFYVE1-209ENST00000556761 COL17A1Q9UMD9 1497 aaPredicted RBP31.5■■■□□ 2.63
ZFYVE1-209ENST00000556761 EHMT2Q96KQ7 1210 aa31.49■■■□□ 2.63
ZFYVE1-209ENST00000556761 CFAP43Q8NDM7 1665 aa31.48■■■□□ 2.63
ZFYVE1-209ENST00000556761 MAGI3Q5TCQ9 1506 aa31.47■■■□□ 2.63
ZFYVE1-209ENST00000556761 CD109Q6YHK3 1445 aa31.47■■■□□ 2.63
ZFYVE1-209ENST00000556761 ARHGAP35Q9NRY4 1499 aa31.4■■■□□ 2.62
ZFYVE1-209ENST00000556761 ABCA9Q8IUA7 1624 aa31.35■■■□□ 2.61
ZFYVE1-209ENST00000556761 AEBP2Q6ZN18 517 aaPredicted RBP31.33■■■□□ 2.61
ZFYVE1-209ENST00000556761 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.32■■■□□ 2.6
ZFYVE1-209ENST00000556761 HNRNPUL2Q1KMD3 747 aaKnown RBP31.32■■■□□ 2.6
ZFYVE1-209ENST00000556761 FMN1Q68DA7 1419 aa31.29■■■□□ 2.6
ZFYVE1-209ENST00000556761 PLEKHD1A6NEE1 506 aa31.26■■■□□ 2.59
ZFYVE1-209ENST00000556761 KDM4FA0A1W2PPD8 638 aa31.22■■■□□ 2.59
ZFYVE1-209ENST00000556761 ARAP3Q8WWN8 1544 aa31.22■■■□□ 2.59
ZFYVE1-209ENST00000556761 CDK13Q14004 1512 aaKnown RBP31.21■■■□□ 2.59
ZFYVE1-209ENST00000556761 PHLDB1Q86UU1 1377 aa31.19■■■□□ 2.58
ZFYVE1-209ENST00000556761 HECW1Q76N89 1606 aa31.16■■■□□ 2.58
ZFYVE1-209ENST00000556761 NEO1Q92859 1461 aa31.14■■■□□ 2.58
ZFYVE1-209ENST00000556761 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.13■■■□□ 2.57
ZFYVE1-209ENST00000556761 ATP1B4Q9UN42 357 aaPredicted RBP31.07■■■□□ 2.56
ZFYVE1-209ENST00000556761 TTC37Q6PGP7 1564 aa31.06■■■□□ 2.56
ZFYVE1-209ENST00000556761 CASKIN1Q8WXD9 1431 aa31.03■■■□□ 2.56
ZFYVE1-209ENST00000556761 LRRIQ1Q96JM4 1722 aa31.03■■■□□ 2.56
ZFYVE1-209ENST00000556761 CLIP1P30622 1438 aa31.02■■■□□ 2.56
ZFYVE1-209ENST00000556761 ADGRL1O94910 1474 aa31.01■■■□□ 2.56
ZFYVE1-209ENST00000556761 RAPGEF3O95398 923 aa31■■■□□ 2.55
ZFYVE1-209ENST00000556761 CDK11AQ9UQ88 783 aaPredicted RBP31■■■□□ 2.55
ZFYVE1-209ENST00000556761 PCF11O94913 1555 aaKnown RBP30.98■■■□□ 2.55
ZFYVE1-209ENST00000556761 TROQ12816 1431 aaPredicted RBP30.98■■■□□ 2.55
ZFYVE1-209ENST00000556761 AKNAQ7Z591 1439 aa30.98■■■□□ 2.55
ZFYVE1-209ENST00000556761 FRMPD1Q5SYB0 1578 aa30.97■■■□□ 2.55
ZFYVE1-209ENST00000556761 FANCAO15360 1455 aa30.97■■■□□ 2.55
ZFYVE1-209ENST00000556761 PLCH2O75038 1416 aa30.96■■■□□ 2.55
ZFYVE1-209ENST00000556761 CFAP74Q9C0B2 1584 aa30.92■■■□□ 2.54
ZFYVE1-209ENST00000556761 KIF14Q15058 1648 aa30.91■■■□□ 2.54
ZFYVE1-209ENST00000556761 DENND4BO75064 1496 aaPredicted RBP30.9■■■□□ 2.54
ZFYVE1-209ENST00000556761 CCDC18Q5T9S5 1454 aa30.9■■■□□ 2.54
ZFYVE1-209ENST00000556761 FYCO1Q9BQS8 1478 aa30.9■■■□□ 2.54
ZFYVE1-209ENST00000556761 RICTORQ6R327 1708 aa30.87■■■□□ 2.53
ZFYVE1-209ENST00000556761 MYO5CQ9NQX4 1742 aa30.82■■■□□ 2.52
ZFYVE1-209ENST00000556761 EFCAB2Q5VUJ9 269 aa30.8■■■□□ 2.52
ZFYVE1-209ENST00000556761 ZMYM4Q5VZL5 1548 aa30.78■■■□□ 2.52
ZFYVE1-209ENST00000556761 CEP162Q5TB80 1403 aa30.78■■■□□ 2.52
ZFYVE1-209ENST00000556761 SCAPERQ9BY12 1400 aa30.78■■■□□ 2.52
ZFYVE1-209ENST00000556761 POGZQ7Z3K3 1410 aa30.75■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms