RNA–Protein interactions for RNA: ENST00000556736.5

MEG3-227, Transcript of maternally expressed 3, humanhuman

TSL 2

Gene MEG3, Length 1,689 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-227ENST00000556736 ARAP1Q96P48 1450 aa28.54■■■□□ 2.16
MEG3-227ENST00000556736 SYNJ2O15056 1496 aa28.5■■■□□ 2.15
MEG3-227ENST00000556736 EFCAB5A4FU69 1503 aa28.49■■■□□ 2.15
MEG3-227ENST00000556736 GRIN2AQ12879 1464 aa28.48■■■□□ 2.15
MEG3-227ENST00000556736 CHMP7Q8WUX9 453 aaPredicted RBP28.42■■■□□ 2.14
MEG3-227ENST00000556736 IQGAP2Q13576 1575 aa28.39■■■□□ 2.14
MEG3-227ENST00000556736 TRIM26Q12899 539 aaPredicted RBP28.38■■■□□ 2.13
MEG3-227ENST00000556736 KIAA0586Q9BVV6 1533 aa28.36■■■□□ 2.13
MEG3-227ENST00000556736 APLP2Q06481 763 aa28.35■■■□□ 2.13
MEG3-227ENST00000556736 SAMD9Q5K651 1589 aa28.35■■■□□ 2.13
MEG3-227ENST00000556736 FBLN2P98095 1184 aa28.31■■■□□ 2.12
MEG3-227ENST00000556736 PCGF6Q9BYE7 350 aa28.29■■■□□ 2.12
MEG3-227ENST00000556736 NUP160Q12769 1436 aa28.28■■■□□ 2.12
MEG3-227ENST00000556736 FHOD3Q2V2M9 1422 aa28.28■■■□□ 2.12
MEG3-227ENST00000556736 PPARGC1BQ86YN6 1023 aaKnown RBP28.27■■■□□ 2.12
MEG3-227ENST00000556736 UGGT2Q9NYU1 1516 aa28.27■■■□□ 2.12
MEG3-227ENST00000556736 CEP170Q5SW79 1584 aa28.27■■■□□ 2.12
MEG3-227ENST00000556736 P3H3Q8IVL6 736 aa28.26■■■□□ 2.12
MEG3-227ENST00000556736 FMN1Q68DA7 1419 aa28.24■■■□□ 2.11
MEG3-227ENST00000556736 FYCO1Q9BQS8 1478 aa28.16■■■□□ 2.1
MEG3-227ENST00000556736 CASKIN1Q8WXD9 1431 aa28.15■■■□□ 2.1
MEG3-227ENST00000556736 MAP3K1Q13233 1512 aa28.15■■■□□ 2.1
MEG3-227ENST00000556736 PCF11O94913 1555 aaKnown RBP28.14■■■□□ 2.1
MEG3-227ENST00000556736 CHD1O14646 1710 aa28.14■■■□□ 2.09
MEG3-227ENST00000556736 KIAA0556O60303 1618 aa28.09■■■□□ 2.09
MEG3-227ENST00000556736 DISP1Q96F81 1524 aa28.09■■■□□ 2.09
MEG3-227ENST00000556736 TTBK1Q5TCY1 1321 aaPredicted RBP28.08■■■□□ 2.08
MEG3-227ENST00000556736 TIAM1Q13009 1591 aa28.06■■■□□ 2.08
MEG3-227ENST00000556736 JPH4Q96JJ6 628 aa28.05■■■□□ 2.08
MEG3-227ENST00000556736 CARMIL2Q6F5E8 1435 aa28.04■■■□□ 2.08
MEG3-227ENST00000556736 CFAP43Q8NDM7 1665 aa28■■■□□ 2.07
MEG3-227ENST00000556736 ATP1B4Q9UN42 357 aaPredicted RBP27.99■■■□□ 2.07
MEG3-227ENST00000556736 KANK4Q5T7N3 995 aaPredicted RBP27.98■■■□□ 2.07
MEG3-227ENST00000556736 LRRC9Q6ZRR7 1453 aa27.94■■■□□ 2.06
MEG3-227ENST00000556736 HECW1Q76N89 1606 aa27.93■■■□□ 2.06
MEG3-227ENST00000556736 CCDC18Q5T9S5 1454 aa27.9■■■□□ 2.06
MEG3-227ENST00000556736 SHROOM2Q13796 1616 aa27.89■■■□□ 2.05
MEG3-227ENST00000556736 PRG4Q92954 1404 aaPredicted RBP27.87■■■□□ 2.05
MEG3-227ENST00000556736 CLASP1Q7Z460 1538 aa27.86■■■□□ 2.05
MEG3-227ENST00000556736 LRRIQ1Q96JM4 1722 aa27.82■■■□□ 2.04
MEG3-227ENST00000556736 RAPGEF6Q8TEU7 1601 aa27.81■■■□□ 2.04
MEG3-227ENST00000556736 EPRSP07814 1512 aaKnown RBP27.8■■■□□ 2.04
MEG3-227ENST00000556736 MTUS2Q5JR59 1369 aa27.77■■■□□ 2.04
MEG3-227ENST00000556736 NUP153P49790 1475 aaKnown RBP27.74■■■□□ 2.03
MEG3-227ENST00000556736 EHBP1L1Q8N3D4 1523 aa27.73■■■□□ 2.03
MEG3-227ENST00000556736 RRBP1Q9P2E9 1410 aaKnown RBP27.73■■■□□ 2.03
MEG3-227ENST00000556736 PLB1Q6P1J6 1458 aa27.72■■■□□ 2.03
MEG3-227ENST00000556736 PTPRGP23470 1445 aa27.72■■■□□ 2.03
MEG3-227ENST00000556736 ABCA8O94911 1581 aa27.69■■■□□ 2.02
MEG3-227ENST00000556736 CDK13Q14004 1512 aaKnown RBP27.68■■■□□ 2.02
MEG3-227ENST00000556736 CCNB3Q8WWL7 1395 aa27.65■■■□□ 2.02
MEG3-227ENST00000556736 PHLDB1Q86UU1 1377 aa27.64■■■□□ 2.02
MEG3-227ENST00000556736 SUPT6HQ7KZ85 1726 aaKnown RBP27.64■■■□□ 2.01
MEG3-227ENST00000556736 OSCARQ8IYS5 282 aa27.63■■■□□ 2.01
MEG3-227ENST00000556736 CDK11AQ9UQ88 783 aaPredicted RBP27.63■■■□□ 2.01
MEG3-227ENST00000556736 MAGI3Q5TCQ9 1506 aa27.62■■■□□ 2.01
MEG3-227ENST00000556736 ERCC6L2Q5T890 1561 aa27.61■■■□□ 2.01
MEG3-227ENST00000556736 NCOA2Q15596 1464 aa27.6■■■□□ 2.01
MEG3-227ENST00000556736 ARID3CA6NKF2 412 aa27.58■■■□□ 2.01
MEG3-227ENST00000556736 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.56■■■□□ 2
MEG3-227ENST00000556736 HNRNPUL2Q1KMD3 747 aaKnown RBP27.56■■■□□ 2
MEG3-227ENST00000556736 UACAQ9BZF9 1416 aa27.56■■■□□ 2
MEG3-227ENST00000556736 ARHGEF11O15085 1522 aa27.55■■■□□ 2
MEG3-227ENST00000556736 MYOM3Q5VTT5 1437 aa27.5■■□□□ 1.99
MEG3-227ENST00000556736 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.5■■□□□ 1.99
MEG3-227ENST00000556736 ATP10BO94823 1461 aa27.5■■□□□ 1.99
MEG3-227ENST00000556736 TROQ12816 1431 aaPredicted RBP27.49■■□□□ 1.99
MEG3-227ENST00000556736 FGD6Q6ZV73 1430 aa27.49■■□□□ 1.99
MEG3-227ENST00000556736 ABCC2Q92887 1545 aa27.48■■□□□ 1.99
MEG3-227ENST00000556736 HRCP23327 699 aa27.45■■□□□ 1.98
MEG3-227ENST00000556736 UHRF1BP1LA0JNW5 1464 aa27.44■■□□□ 1.98
MEG3-227ENST00000556736 PLEKHD1A6NEE1 506 aa27.43■■□□□ 1.98
MEG3-227ENST00000556736 FAM50AQ14320 339 aaKnown RBP27.42■■□□□ 1.98
MEG3-227ENST00000556736 ADCY10Q96PN6 1610 aa27.4■■□□□ 1.98
MEG3-227ENST00000556736 MIA2Q96PC5 1412 aa27.39■■□□□ 1.97
MEG3-227ENST00000556736 KIF14Q15058 1648 aa27.33■■□□□ 1.97
MEG3-227ENST00000556736 PTPN23Q9H3S7 1636 aa27.33■■□□□ 1.97
MEG3-227ENST00000556736 TCOF1Q13428 1488 aaKnown RBP27.32■■□□□ 1.96
MEG3-227ENST00000556736 ITGAEP38570 1179 aa27.31■■□□□ 1.96
MEG3-227ENST00000556736 KDM5BQ9UGL1 1544 aa27.31■■□□□ 1.96
MEG3-227ENST00000556736 ZEB1P37275 1124 aaPredicted RBP27.27■■□□□ 1.96
MEG3-227ENST00000556736 ITSN2Q9NZM3 1697 aa27.27■■□□□ 1.96
MEG3-227ENST00000556736 CCER1Q8TC90 406 aaPredicted RBP27.26■■□□□ 1.95
MEG3-227ENST00000556736 ZCCHC11Q5TAX3 1644 aaKnown RBP27.25■■□□□ 1.95
MEG3-227ENST00000556736 ABCC10Q5T3U5 1492 aa27.23■■□□□ 1.95
MEG3-227ENST00000556736 GPATCH8Q9UKJ3 1502 aaKnown RBP27.23■■□□□ 1.95
MEG3-227ENST00000556736 CFDP1Q9UEE9 299 aaPredicted RBP27.18■■□□□ 1.94
MEG3-227ENST00000556736 SETD5Q9C0A6 1442 aa27.14■■□□□ 1.94
MEG3-227ENST00000556736 CDC42BPAQ5VT25 1732 aa27.13■■□□□ 1.93
MEG3-227ENST00000556736 PTPRKQ15262 1439 aa27.11■■□□□ 1.93
MEG3-227ENST00000556736 CAMSAP2Q08AD1 1489 aa27.1■■□□□ 1.93
MEG3-227ENST00000556736 RAB3GAP2Q9H2M9 1393 aa27.08■■□□□ 1.93
MEG3-227ENST00000556736 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.08■■□□□ 1.93
MEG3-227ENST00000556736 DNMT1P26358 1616 aaKnown RBP27.07■■□□□ 1.92
MEG3-227ENST00000556736 HFM1A2PYH4 1435 aa27.07■■□□□ 1.92
MEG3-227ENST00000556736 WDR7Q9Y4E6 1490 aa27.06■■□□□ 1.92
MEG3-227ENST00000556736 PREX2Q70Z35 1606 aa27.06■■□□□ 1.92
MEG3-227ENST00000556736 NPM1P06748 294 aaKnown RBP eCLIP27.05■■□□□ 1.92
MEG3-227ENST00000556736 DAPK1P53355 1430 aa27.05■■□□□ 1.92
MEG3-227ENST00000556736 ZNF644Q9H582 1327 aaPredicted RBP27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms