RNA–Protein interactions for RNA: ENST00000556674.1

TGFB3-206, Transcript of transforming growth factor beta 3, humanhuman

TSL 3

Gene TGFB3, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-206ENST00000556674 FAM69CQ0P6D2 419 aa27.54■■■□□ 2
TGFB3-206ENST00000556674 ABCC10Q5T3U5 1492 aa27.52■■■□□ 2
TGFB3-206ENST00000556674 JPH4Q96JJ6 628 aa27.52■■■□□ 2
TGFB3-206ENST00000556674 CUL7Q14999 1698 aa27.5■■□□□ 1.99
TGFB3-206ENST00000556674 IGF1RP08069 1367 aa27.48■■□□□ 1.99
TGFB3-206ENST00000556674 MAPKBP1O60336 1514 aa27.45■■□□□ 1.98
TGFB3-206ENST00000556674 DIP2BQ9P265 1576 aa27.44■■□□□ 1.98
TGFB3-206ENST00000556674 NPM1P06748 294 aaKnown RBP eCLIP27.44■■□□□ 1.98
TGFB3-206ENST00000556674 RUSC2Q8N2Y8 1516 aa27.41■■□□□ 1.98
TGFB3-206ENST00000556674 KDM4FA0A1W2PPD8 638 aa27.41■■□□□ 1.98
TGFB3-206ENST00000556674 ADCY10Q96PN6 1610 aa27.38■■□□□ 1.97
TGFB3-206ENST00000556674 KDM6BO15054 1643 aa27.38■■□□□ 1.97
TGFB3-206ENST00000556674 CARMIL1Q5VZK9 1371 aa27.34■■□□□ 1.97
TGFB3-206ENST00000556674 TSPOAP1O95153 1857 aa27.27■■□□□ 1.96
TGFB3-206ENST00000556674 ILDR1Q86SU0 546 aaPredicted RBP27.25■■□□□ 1.95
TGFB3-206ENST00000556674 KIAA0586Q9BVV6 1533 aa27.23■■□□□ 1.95
TGFB3-206ENST00000556674 RAPGEF2Q9Y4G8 1499 aa27.19■■□□□ 1.94
TGFB3-206ENST00000556674 EEA1Q15075 1411 aa27.11■■□□□ 1.93
TGFB3-206ENST00000556674 PTPRGP23470 1445 aa27.07■■□□□ 1.92
TGFB3-206ENST00000556674 IQGAP2Q13576 1575 aa27.05■■□□□ 1.92
TGFB3-206ENST00000556674 TTBK1Q5TCY1 1321 aaPredicted RBP27.05■■□□□ 1.92
TGFB3-206ENST00000556674 PRXQ9BXM0 1461 aa27.05■■□□□ 1.92
TGFB3-206ENST00000556674 ADGRL1O94910 1474 aa27.03■■□□□ 1.92
TGFB3-206ENST00000556674 PPRC1Q5VV67 1664 aaKnown RBP27.03■■□□□ 1.92
TGFB3-206ENST00000556674 ABCC2Q92887 1545 aa27.02■■□□□ 1.92
TGFB3-206ENST00000556674 ASXL2Q76L83 1435 aa27■■□□□ 1.91
TGFB3-206ENST00000556674 CHIC1Q5VXU3 224 aa26.99■■□□□ 1.91
TGFB3-206ENST00000556674 CSRNP3Q8WYN3 585 aa26.99■■□□□ 1.91
TGFB3-206ENST00000556674 GLI2P10070 1586 aa26.99■■□□□ 1.91
TGFB3-206ENST00000556674 CARMIL2Q6F5E8 1435 aa26.99■■□□□ 1.91
TGFB3-206ENST00000556674 PLB1Q6P1J6 1458 aa26.97■■□□□ 1.91
TGFB3-206ENST00000556674 TNIKQ9UKE5 1360 aa26.97■■□□□ 1.91
TGFB3-206ENST00000556674 CTTNBP2Q8WZ74 1663 aa26.94■■□□□ 1.9
TGFB3-206ENST00000556674 COL17A1Q9UMD9 1497 aaPredicted RBP26.92■■□□□ 1.9
TGFB3-206ENST00000556674 UGGT2Q9NYU1 1516 aa26.91■■□□□ 1.9
TGFB3-206ENST00000556674 UHRF1BP1LA0JNW5 1464 aa26.88■■□□□ 1.89
TGFB3-206ENST00000556674 HECW2Q9P2P5 1572 aa26.88■■□□□ 1.89
TGFB3-206ENST00000556674 UACAQ9BZF9 1416 aa26.85■■□□□ 1.89
TGFB3-206ENST00000556674 EPRSP07814 1512 aaKnown RBP26.84■■□□□ 1.89
TGFB3-206ENST00000556674 MAP3K4Q9Y6R4 1608 aa26.83■■□□□ 1.89
TGFB3-206ENST00000556674 DISP1Q96F81 1524 aa26.83■■□□□ 1.89
TGFB3-206ENST00000556674 GOLGA3Q08378 1498 aa26.81■■□□□ 1.88
TGFB3-206ENST00000556674 TEX14Q8IWB6 1497 aa26.78■■□□□ 1.88
TGFB3-206ENST00000556674 KDM5BQ9UGL1 1544 aa26.78■■□□□ 1.88
TGFB3-206ENST00000556674 KIAA0556O60303 1618 aa26.78■■□□□ 1.88
TGFB3-206ENST00000556674 KIF21BO75037 1637 aa26.77■■□□□ 1.88
TGFB3-206ENST00000556674 FAM9AQ8IZU1 332 aaPredicted RBP26.75■■□□□ 1.87
TGFB3-206ENST00000556674 ZCCHC11Q5TAX3 1644 aaKnown RBP26.73■■□□□ 1.87
TGFB3-206ENST00000556674 WDR7Q9Y4E6 1490 aa26.62■■□□□ 1.85
TGFB3-206ENST00000556674 SAMD9Q5K651 1589 aa26.58■■□□□ 1.85
TGFB3-206ENST00000556674 MAGI3Q5TCQ9 1506 aa26.54■■□□□ 1.84
TGFB3-206ENST00000556674 CD109Q6YHK3 1445 aa26.53■■□□□ 1.84
TGFB3-206ENST00000556674 CFAP43Q8NDM7 1665 aa26.51■■□□□ 1.83
TGFB3-206ENST00000556674 EFCAB5A4FU69 1503 aa26.5■■□□□ 1.83
TGFB3-206ENST00000556674 ABCA8O94911 1581 aa26.5■■□□□ 1.83
TGFB3-206ENST00000556674 UBTFP17480 764 aaKnown RBP26.49■■□□□ 1.83
TGFB3-206ENST00000556674 KCNH8Q96L42 1107 aa26.49■■□□□ 1.83
TGFB3-206ENST00000556674 FBXO41Q8TF61 875 aa26.47■■□□□ 1.83
TGFB3-206ENST00000556674 P3H3Q8IVL6 736 aa26.43■■□□□ 1.82
TGFB3-206ENST00000556674 RANGAP1P46060 587 aaPredicted RBP26.37■■□□□ 1.81
TGFB3-206ENST00000556674 ARAP3Q8WWN8 1544 aa26.35■■□□□ 1.81
TGFB3-206ENST00000556674 FHOD3Q2V2M9 1422 aa26.35■■□□□ 1.81
TGFB3-206ENST00000556674 RAPGEF6Q8TEU7 1601 aa26.35■■□□□ 1.81
TGFB3-206ENST00000556674 EHMT2Q96KQ7 1210 aa26.34■■□□□ 1.81
TGFB3-206ENST00000556674 PTPRMP28827 1452 aa26.32■■□□□ 1.8
TGFB3-206ENST00000556674 ADAMTSL3P82987 1691 aa26.29■■□□□ 1.8
TGFB3-206ENST00000556674 ATP10BO94823 1461 aa26.25■■□□□ 1.79
TGFB3-206ENST00000556674 ARHGAP35Q9NRY4 1499 aa26.25■■□□□ 1.79
TGFB3-206ENST00000556674 FMN1Q68DA7 1419 aa26.25■■□□□ 1.79
TGFB3-206ENST00000556674 ARID3CA6NKF2 412 aa26.25■■□□□ 1.79
TGFB3-206ENST00000556674 NUP153P49790 1475 aaKnown RBP26.22■■□□□ 1.79
TGFB3-206ENST00000556674 RAPGEF3O95398 923 aa26.2■■□□□ 1.78
TGFB3-206ENST00000556674 ABCA9Q8IUA7 1624 aa26.2■■□□□ 1.78
TGFB3-206ENST00000556674 PHLDB1Q86UU1 1377 aa26.19■■□□□ 1.78
TGFB3-206ENST00000556674 PCF11O94913 1555 aaKnown RBP26.18■■□□□ 1.78
TGFB3-206ENST00000556674 BCORL1Q5H9F3 1711 aa26.17■■□□□ 1.78
TGFB3-206ENST00000556674 MADDQ8WXG6 1647 aa26.16■■□□□ 1.78
TGFB3-206ENST00000556674 LMTK3Q96Q04 1460 aa26.15■■□□□ 1.78
TGFB3-206ENST00000556674 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.13■■□□□ 1.77
TGFB3-206ENST00000556674 HNRNPUL2Q1KMD3 747 aaKnown RBP26.13■■□□□ 1.77
TGFB3-206ENST00000556674 FRMPD1Q5SYB0 1578 aa26.12■■□□□ 1.77
TGFB3-206ENST00000556674 HECW1Q76N89 1606 aa26.12■■□□□ 1.77
TGFB3-206ENST00000556674 ARID4BQ4LE39 1312 aaPredicted RBP26.12■■□□□ 1.77
TGFB3-206ENST00000556674 NEO1Q92859 1461 aa26.11■■□□□ 1.77
TGFB3-206ENST00000556674 CLIP1P30622 1438 aa26.09■■□□□ 1.77
TGFB3-206ENST00000556674 PLEKHD1A6NEE1 506 aa26.07■■□□□ 1.76
TGFB3-206ENST00000556674 RIMS1Q86UR5 1692 aaKnown RBP26.04■■□□□ 1.76
TGFB3-206ENST00000556674 HSPA2P54652 639 aa26.01■■□□□ 1.75
TGFB3-206ENST00000556674 ARHGEF40Q8TER5 1519 aa26■■□□□ 1.75
TGFB3-206ENST00000556674 CDK11AQ9UQ88 783 aaPredicted RBP26■■□□□ 1.75
TGFB3-206ENST00000556674 CASKIN1Q8WXD9 1431 aa25.99■■□□□ 1.75
TGFB3-206ENST00000556674 ATP1B4Q9UN42 357 aaPredicted RBP25.99■■□□□ 1.75
TGFB3-206ENST00000556674 CDK13Q14004 1512 aaKnown RBP25.98■■□□□ 1.75
TGFB3-206ENST00000556674 PLPPR3Q6T4P5 718 aa25.95■■□□□ 1.74
TGFB3-206ENST00000556674 CCDC18Q5T9S5 1454 aa25.95■■□□□ 1.74
TGFB3-206ENST00000556674 FYCO1Q9BQS8 1478 aa25.95■■□□□ 1.74
TGFB3-206ENST00000556674 RICTORQ6R327 1708 aa25.94■■□□□ 1.74
TGFB3-206ENST00000556674 DENND4BO75064 1496 aaPredicted RBP25.93■■□□□ 1.74
TGFB3-206ENST00000556674 CEP162Q5TB80 1403 aa25.93■■□□□ 1.74
TGFB3-206ENST00000556674 CERKQ8TCT0 537 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms