RNA–Protein interactions for RNA: ENST00000556609.5

EFCAB11-211, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3 BASIC

Gene EFCAB11, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-211ENST00000556609 CUL7Q14999 1698 aa30.54■■■□□ 2.48
EFCAB11-211ENST00000556609 CARMIL1Q5VZK9 1371 aa30.52■■■□□ 2.48
EFCAB11-211ENST00000556609 KIAA0586Q9BVV6 1533 aa30.5■■■□□ 2.47
EFCAB11-211ENST00000556609 RUSC2Q8N2Y8 1516 aa30.47■■■□□ 2.47
EFCAB11-211ENST00000556609 NPM1P06748 294 aaKnown RBP eCLIP30.32■■■□□ 2.44
EFCAB11-211ENST00000556609 RAPGEF2Q9Y4G8 1499 aa30.25■■■□□ 2.43
EFCAB11-211ENST00000556609 CARMIL2Q6F5E8 1435 aa30.25■■■□□ 2.43
EFCAB11-211ENST00000556609 PTPRGP23470 1445 aa30.2■■■□□ 2.42
EFCAB11-211ENST00000556609 TNIKQ9UKE5 1360 aa30.16■■■□□ 2.42
EFCAB11-211ENST00000556609 IQGAP2Q13576 1575 aa30.16■■■□□ 2.42
EFCAB11-211ENST00000556609 MAPKBP1O60336 1514 aa30.06■■■□□ 2.4
EFCAB11-211ENST00000556609 ADCY10Q96PN6 1610 aa30.05■■■□□ 2.4
EFCAB11-211ENST00000556609 FAM69CQ0P6D2 419 aa30.03■■■□□ 2.4
EFCAB11-211ENST00000556609 UGGT2Q9NYU1 1516 aa30.02■■■□□ 2.4
EFCAB11-211ENST00000556609 TTBK1Q5TCY1 1321 aaPredicted RBP30.02■■■□□ 2.4
EFCAB11-211ENST00000556609 ABCC10Q5T3U5 1492 aa30.02■■■□□ 2.4
EFCAB11-211ENST00000556609 PRXQ9BXM0 1461 aa30■■■□□ 2.39
EFCAB11-211ENST00000556609 DISP1Q96F81 1524 aa30■■■□□ 2.39
EFCAB11-211ENST00000556609 UACAQ9BZF9 1416 aa29.95■■■□□ 2.38
EFCAB11-211ENST00000556609 UHRF1BP1LA0JNW5 1464 aa29.94■■■□□ 2.38
EFCAB11-211ENST00000556609 CSRNP3Q8WYN3 585 aa29.94■■■□□ 2.38
EFCAB11-211ENST00000556609 ABCC2Q92887 1545 aa29.93■■■□□ 2.38
EFCAB11-211ENST00000556609 GOLGA3Q08378 1498 aa29.9■■■□□ 2.38
EFCAB11-211ENST00000556609 EEA1Q15075 1411 aa29.88■■■□□ 2.37
EFCAB11-211ENST00000556609 KIF13AQ9H1H9 1805 aa29.87■■■□□ 2.37
EFCAB11-211ENST00000556609 FAM9AQ8IZU1 332 aaPredicted RBP29.86■■■□□ 2.37
EFCAB11-211ENST00000556609 PLB1Q6P1J6 1458 aa29.85■■■□□ 2.37
EFCAB11-211ENST00000556609 DIP2BQ9P265 1576 aa29.85■■■□□ 2.37
EFCAB11-211ENST00000556609 KIAA0556O60303 1618 aa29.85■■■□□ 2.37
EFCAB11-211ENST00000556609 ASXL2Q76L83 1435 aa29.79■■■□□ 2.36
EFCAB11-211ENST00000556609 CTTNBP2Q8WZ74 1663 aa29.79■■■□□ 2.36
EFCAB11-211ENST00000556609 KDM5BQ9UGL1 1544 aa29.76■■■□□ 2.36
EFCAB11-211ENST00000556609 GLI2P10070 1586 aa29.67■■■□□ 2.34
EFCAB11-211ENST00000556609 AEBP2Q6ZN18 517 aaPredicted RBP29.64■■■□□ 2.34
EFCAB11-211ENST00000556609 EPRSP07814 1512 aaKnown RBP29.6■■■□□ 2.33
EFCAB11-211ENST00000556609 ABCA8O94911 1581 aa29.59■■■□□ 2.33
EFCAB11-211ENST00000556609 ZCCHC11Q5TAX3 1644 aaKnown RBP29.58■■■□□ 2.33
EFCAB11-211ENST00000556609 CHIC1Q5VXU3 224 aa29.58■■■□□ 2.33
EFCAB11-211ENST00000556609 P3H3Q8IVL6 736 aa29.57■■■□□ 2.32
EFCAB11-211ENST00000556609 WDR7Q9Y4E6 1490 aa29.55■■■□□ 2.32
EFCAB11-211ENST00000556609 KDM6BO15054 1643 aa29.53■■■□□ 2.32
EFCAB11-211ENST00000556609 TSPOAP1O95153 1857 aa29.51■■■□□ 2.31
EFCAB11-211ENST00000556609 TEX14Q8IWB6 1497 aa29.48■■■□□ 2.31
EFCAB11-211ENST00000556609 SAMD9Q5K651 1589 aa29.47■■■□□ 2.31
EFCAB11-211ENST00000556609 KIF21BO75037 1637 aa29.45■■■□□ 2.31
EFCAB11-211ENST00000556609 KCNH8Q96L42 1107 aa29.45■■■□□ 2.31
EFCAB11-211ENST00000556609 RANGAP1P46060 587 aaPredicted RBP29.42■■■□□ 2.3
EFCAB11-211ENST00000556609 MAP3K4Q9Y6R4 1608 aa29.42■■■□□ 2.3
EFCAB11-211ENST00000556609 ATP10BO94823 1461 aa29.39■■■□□ 2.3
EFCAB11-211ENST00000556609 CD109Q6YHK3 1445 aa29.38■■■□□ 2.29
EFCAB11-211ENST00000556609 UBTFP17480 764 aaKnown RBP29.37■■■□□ 2.29
EFCAB11-211ENST00000556609 PPRC1Q5VV67 1664 aaKnown RBP29.37■■■□□ 2.29
EFCAB11-211ENST00000556609 ARID3CA6NKF2 412 aa29.35■■■□□ 2.29
EFCAB11-211ENST00000556609 EFCAB5A4FU69 1503 aa29.34■■■□□ 2.29
EFCAB11-211ENST00000556609 MAGI3Q5TCQ9 1506 aa29.34■■■□□ 2.29
EFCAB11-211ENST00000556609 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.33■■■□□ 2.29
EFCAB11-211ENST00000556609 HNRNPUL2Q1KMD3 747 aaKnown RBP29.33■■■□□ 2.29
EFCAB11-211ENST00000556609 FHOD3Q2V2M9 1422 aa29.32■■■□□ 2.28
EFCAB11-211ENST00000556609 RAPGEF6Q8TEU7 1601 aa29.31■■■□□ 2.28
EFCAB11-211ENST00000556609 CFAP43Q8NDM7 1665 aa29.27■■■□□ 2.28
EFCAB11-211ENST00000556609 COL17A1Q9UMD9 1497 aaPredicted RBP29.26■■■□□ 2.27
EFCAB11-211ENST00000556609 NUP153P49790 1475 aaKnown RBP29.23■■■□□ 2.27
EFCAB11-211ENST00000556609 PLEKHD1A6NEE1 506 aa29.23■■■□□ 2.27
EFCAB11-211ENST00000556609 PHLDB1Q86UU1 1377 aa29.22■■■□□ 2.27
EFCAB11-211ENST00000556609 EHMT2Q96KQ7 1210 aa29.21■■■□□ 2.27
EFCAB11-211ENST00000556609 KDM4FA0A1W2PPD8 638 aa29.17■■■□□ 2.26
EFCAB11-211ENST00000556609 FMN1Q68DA7 1419 aa29.15■■■□□ 2.26
EFCAB11-211ENST00000556609 ABCA9Q8IUA7 1624 aa29.12■■■□□ 2.25
EFCAB11-211ENST00000556609 ARAP3Q8WWN8 1544 aa29.1■■■□□ 2.25
EFCAB11-211ENST00000556609 ARHGAP35Q9NRY4 1499 aa29.06■■■□□ 2.24
EFCAB11-211ENST00000556609 NEO1Q92859 1461 aa29.05■■■□□ 2.24
EFCAB11-211ENST00000556609 CDK11AQ9UQ88 783 aaPredicted RBP29.05■■■□□ 2.24
EFCAB11-211ENST00000556609 ATP1B4Q9UN42 357 aaPredicted RBP29.03■■■□□ 2.24
EFCAB11-211ENST00000556609 ADGRL1O94910 1474 aa28.97■■■□□ 2.23
EFCAB11-211ENST00000556609 HECW1Q76N89 1606 aa28.94■■■□□ 2.22
EFCAB11-211ENST00000556609 RAPGEF3O95398 923 aa28.92■■■□□ 2.22
EFCAB11-211ENST00000556609 CDK13Q14004 1512 aaKnown RBP28.92■■■□□ 2.22
EFCAB11-211ENST00000556609 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.89■■■□□ 2.22
EFCAB11-211ENST00000556609 AKNAQ7Z591 1439 aa28.87■■■□□ 2.21
EFCAB11-211ENST00000556609 FANCAO15360 1455 aa28.87■■■□□ 2.21
EFCAB11-211ENST00000556609 DENND4BO75064 1496 aaPredicted RBP28.84■■■□□ 2.21
EFCAB11-211ENST00000556609 PLCH2O75038 1416 aa28.83■■■□□ 2.21
EFCAB11-211ENST00000556609 CFAP74Q9C0B2 1584 aa28.83■■■□□ 2.21
EFCAB11-211ENST00000556609 CLIP1P30622 1438 aa28.82■■■□□ 2.2
EFCAB11-211ENST00000556609 CASKIN1Q8WXD9 1431 aa28.82■■■□□ 2.2
EFCAB11-211ENST00000556609 TROQ12816 1431 aaPredicted RBP28.8■■■□□ 2.2
EFCAB11-211ENST00000556609 EFCAB2Q5VUJ9 269 aa28.8■■■□□ 2.2
EFCAB11-211ENST00000556609 TTC37Q6PGP7 1564 aa28.78■■■□□ 2.2
EFCAB11-211ENST00000556609 CCDC18Q5T9S5 1454 aa28.77■■■□□ 2.2
EFCAB11-211ENST00000556609 FRMPD1Q5SYB0 1578 aa28.7■■■□□ 2.18
EFCAB11-211ENST00000556609 ARID4BQ4LE39 1312 aaPredicted RBP28.69■■■□□ 2.18
EFCAB11-211ENST00000556609 SCAPERQ9BY12 1400 aa28.69■■■□□ 2.18
EFCAB11-211ENST00000556609 KIF14Q15058 1648 aa28.69■■■□□ 2.18
EFCAB11-211ENST00000556609 MAGI2Q86UL8 1455 aa28.69■■■□□ 2.18
EFCAB11-211ENST00000556609 FYCO1Q9BQS8 1478 aa28.69■■■□□ 2.18
EFCAB11-211ENST00000556609 PCF11O94913 1555 aaKnown RBP28.64■■■□□ 2.18
EFCAB11-211ENST00000556609 POGZQ7Z3K3 1410 aa28.63■■■□□ 2.17
EFCAB11-211ENST00000556609 ZMYM4Q5VZL5 1548 aa28.63■■■□□ 2.17
EFCAB11-211ENST00000556609 RICTORQ6R327 1708 aa28.63■■■□□ 2.17
EFCAB11-211ENST00000556609 ARHGEF40Q8TER5 1519 aa28.6■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms