RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 GRIN2AQ12879 1464 aa28.71■■■□□ 2.19
TUBB3-211ENST00000556536 RAPGEF2Q9Y4G8 1499 aa28.7■■■□□ 2.18
TUBB3-211ENST00000556536 CLASP1Q7Z460 1538 aa28.6■■■□□ 2.17
TUBB3-211ENST00000556536 EHMT2Q96KQ7 1210 aa28.6■■■□□ 2.17
TUBB3-211ENST00000556536 KIF21BO75037 1637 aa28.58■■■□□ 2.17
TUBB3-211ENST00000556536 NUP160Q12769 1436 aa28.56■■■□□ 2.16
TUBB3-211ENST00000556536 CEP170Q5SW79 1584 aa28.54■■■□□ 2.16
TUBB3-211ENST00000556536 GOLGA3Q08378 1498 aa28.51■■■□□ 2.15
TUBB3-211ENST00000556536 LOC105371045A0A1W2PR82 267 aa28.42■■■□□ 2.14
TUBB3-211ENST00000556536 UBTFP17480 764 aaKnown RBP28.42■■■□□ 2.14
TUBB3-211ENST00000556536 KIAA0586Q9BVV6 1533 aa28.42■■■□□ 2.14
TUBB3-211ENST00000556536 AEBP2Q6ZN18 517 aaPredicted RBP28.38■■■□□ 2.13
TUBB3-211ENST00000556536 JPH4Q96JJ6 628 aa28.31■■■□□ 2.12
TUBB3-211ENST00000556536 IQGAP2Q13576 1575 aa28.31■■■□□ 2.12
TUBB3-211ENST00000556536 CTTNBP2Q8WZ74 1663 aa28.29■■■□□ 2.12
TUBB3-211ENST00000556536 TNIKQ9UKE5 1360 aa28.26■■■□□ 2.12
TUBB3-211ENST00000556536 SHROOM2Q13796 1616 aa28.23■■■□□ 2.11
TUBB3-211ENST00000556536 RANGAP1P46060 587 aaPredicted RBP28.22■■■□□ 2.11
TUBB3-211ENST00000556536 PRG4Q92954 1404 aaPredicted RBP28.2■■■□□ 2.11
TUBB3-211ENST00000556536 UGGT2Q9NYU1 1516 aa28.19■■■□□ 2.1
TUBB3-211ENST00000556536 ERCC6L2Q5T890 1561 aa28.15■■■□□ 2.1
TUBB3-211ENST00000556536 DISP1Q96F81 1524 aa28.13■■■□□ 2.09
TUBB3-211ENST00000556536 CARMIL2Q6F5E8 1435 aa28.08■■■□□ 2.09
TUBB3-211ENST00000556536 P3H3Q8IVL6 736 aa28.07■■■□□ 2.08
TUBB3-211ENST00000556536 KIAA0556O60303 1618 aa28.04■■■□□ 2.08
TUBB3-211ENST00000556536 SAMD9Q5K651 1589 aa28.04■■■□□ 2.08
TUBB3-211ENST00000556536 CEP162Q5TB80 1403 aa28.04■■■□□ 2.08
TUBB3-211ENST00000556536 ARHGAP35Q9NRY4 1499 aa28.02■■■□□ 2.08
TUBB3-211ENST00000556536 CLIP1P30622 1438 aa28.02■■■□□ 2.08
TUBB3-211ENST00000556536 EFCAB5A4FU69 1503 aa28■■■□□ 2.07
TUBB3-211ENST00000556536 FHOD3Q2V2M9 1422 aa27.97■■■□□ 2.07
TUBB3-211ENST00000556536 TTBK1Q5TCY1 1321 aaPredicted RBP27.96■■■□□ 2.07
TUBB3-211ENST00000556536 PTPRGP23470 1445 aa27.92■■■□□ 2.06
TUBB3-211ENST00000556536 KIF13AQ9H1H9 1805 aa27.84■■■□□ 2.05
TUBB3-211ENST00000556536 PLB1Q6P1J6 1458 aa27.77■■■□□ 2.04
TUBB3-211ENST00000556536 FMN1Q68DA7 1419 aa27.76■■■□□ 2.04
TUBB3-211ENST00000556536 UACAQ9BZF9 1416 aa27.75■■■□□ 2.03
TUBB3-211ENST00000556536 ABCA8O94911 1581 aa27.72■■■□□ 2.03
TUBB3-211ENST00000556536 ABCC10Q5T3U5 1492 aa27.68■■■□□ 2.02
TUBB3-211ENST00000556536 UHRF1BP1LA0JNW5 1464 aa27.67■■■□□ 2.02
TUBB3-211ENST00000556536 ABCC2Q92887 1545 aa27.67■■■□□ 2.02
TUBB3-211ENST00000556536 ADCY10Q96PN6 1610 aa27.66■■■□□ 2.02
TUBB3-211ENST00000556536 NPM1P06748 294 aaKnown RBP eCLIP27.65■■■□□ 2.02
TUBB3-211ENST00000556536 FAM69CQ0P6D2 419 aa27.65■■■□□ 2.02
TUBB3-211ENST00000556536 RAPGEF6Q8TEU7 1601 aa27.65■■■□□ 2.02
TUBB3-211ENST00000556536 VPS8Q8N3P4 1428 aa27.65■■■□□ 2.02
TUBB3-211ENST00000556536 MAPKBP1O60336 1514 aa27.64■■■□□ 2.02
TUBB3-211ENST00000556536 ATP1B4Q9UN42 357 aaPredicted RBP27.63■■■□□ 2.01
TUBB3-211ENST00000556536 CASKIN1Q8WXD9 1431 aa27.63■■■□□ 2.01
TUBB3-211ENST00000556536 PCF11O94913 1555 aaKnown RBP27.62■■■□□ 2.01
TUBB3-211ENST00000556536 NUP153P49790 1475 aaKnown RBP27.62■■■□□ 2.01
TUBB3-211ENST00000556536 ARID3CA6NKF2 412 aa27.61■■■□□ 2.01
TUBB3-211ENST00000556536 DIP2BQ9P265 1576 aa27.58■■■□□ 2.01
TUBB3-211ENST00000556536 FYCO1Q9BQS8 1478 aa27.57■■■□□ 2
TUBB3-211ENST00000556536 HECW1Q76N89 1606 aa27.54■■■□□ 2
TUBB3-211ENST00000556536 KDM5BQ9UGL1 1544 aa27.54■■■□□ 2
TUBB3-211ENST00000556536 ATP10BO94823 1461 aa27.53■■■□□ 2
TUBB3-211ENST00000556536 EPRSP07814 1512 aaKnown RBP27.5■■□□□ 1.99
TUBB3-211ENST00000556536 KDM6BO15054 1643 aa27.49■■□□□ 1.99
TUBB3-211ENST00000556536 CDK13Q14004 1512 aaKnown RBP27.48■■□□□ 1.99
TUBB3-211ENST00000556536 ZCCHC11Q5TAX3 1644 aaKnown RBP27.46■■□□□ 1.99
TUBB3-211ENST00000556536 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.46■■□□□ 1.99
TUBB3-211ENST00000556536 HNRNPUL2Q1KMD3 747 aaKnown RBP27.46■■□□□ 1.99
TUBB3-211ENST00000556536 LRRIQ1Q96JM4 1722 aa27.42■■□□□ 1.98
TUBB3-211ENST00000556536 CCDC18Q5T9S5 1454 aa27.42■■□□□ 1.98
TUBB3-211ENST00000556536 KDM4FA0A1W2PPD8 638 aa27.41■■□□□ 1.98
TUBB3-211ENST00000556536 ASXL2Q76L83 1435 aa27.38■■□□□ 1.97
TUBB3-211ENST00000556536 TSPOAP1O95153 1857 aa27.36■■□□□ 1.97
TUBB3-211ENST00000556536 PLEKHD1A6NEE1 506 aa27.33■■□□□ 1.97
TUBB3-211ENST00000556536 TIAM1Q13009 1591 aa27.31■■□□□ 1.96
TUBB3-211ENST00000556536 APLP2Q06481 763 aa27.31■■□□□ 1.96
TUBB3-211ENST00000556536 CDK11AQ9UQ88 783 aaPredicted RBP27.31■■□□□ 1.96
TUBB3-211ENST00000556536 WDR7Q9Y4E6 1490 aa27.31■■□□□ 1.96
TUBB3-211ENST00000556536 MAP3K1Q13233 1512 aa27.3■■□□□ 1.96
TUBB3-211ENST00000556536 MAGI3Q5TCQ9 1506 aa27.3■■□□□ 1.96
TUBB3-211ENST00000556536 CFAP43Q8NDM7 1665 aa27.27■■□□□ 1.96
TUBB3-211ENST00000556536 KANK4Q5T7N3 995 aaPredicted RBP27.27■■□□□ 1.96
TUBB3-211ENST00000556536 KCNH8Q96L42 1107 aa27.26■■□□□ 1.95
TUBB3-211ENST00000556536 TROQ12816 1431 aaPredicted RBP27.25■■□□□ 1.95
TUBB3-211ENST00000556536 MTUS2Q5JR59 1369 aa27.22■■□□□ 1.95
TUBB3-211ENST00000556536 LRRC9Q6ZRR7 1453 aa27.22■■□□□ 1.95
TUBB3-211ENST00000556536 GLI2P10070 1586 aa27.18■■□□□ 1.94
TUBB3-211ENST00000556536 EHBP1L1Q8N3D4 1523 aa27.16■■□□□ 1.94
TUBB3-211ENST00000556536 PPARGC1BQ86YN6 1023 aaKnown RBP27.16■■□□□ 1.94
TUBB3-211ENST00000556536 PPRC1Q5VV67 1664 aaKnown RBP27.14■■□□□ 1.94
TUBB3-211ENST00000556536 KIF14Q15058 1648 aa27.13■■□□□ 1.93
TUBB3-211ENST00000556536 ILDR1Q86SU0 546 aaPredicted RBP27.12■■□□□ 1.93
TUBB3-211ENST00000556536 ADGRL1O94910 1474 aa27.09■■□□□ 1.93
TUBB3-211ENST00000556536 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.09■■□□□ 1.93
TUBB3-211ENST00000556536 NCOA2Q15596 1464 aa27.06■■□□□ 1.92
TUBB3-211ENST00000556536 TTC37Q6PGP7 1564 aa27.05■■□□□ 1.92
TUBB3-211ENST00000556536 ABCA9Q8IUA7 1624 aa27.04■■□□□ 1.92
TUBB3-211ENST00000556536 MAP3K4Q9Y6R4 1608 aa27.01■■□□□ 1.92
TUBB3-211ENST00000556536 CD109Q6YHK3 1445 aa27.01■■□□□ 1.91
TUBB3-211ENST00000556536 SUPT6HQ7KZ85 1726 aaKnown RBP27.01■■□□□ 1.91
TUBB3-211ENST00000556536 TEX14Q8IWB6 1497 aa27■■□□□ 1.91
TUBB3-211ENST00000556536 COL17A1Q9UMD9 1497 aaPredicted RBP27■■□□□ 1.91
TUBB3-211ENST00000556536 CCNB3Q8WWL7 1395 aa26.98■■□□□ 1.91
TUBB3-211ENST00000556536 PHLDB1Q86UU1 1377 aa26.96■■□□□ 1.91
TUBB3-211ENST00000556536 GPATCH8Q9UKJ3 1502 aaKnown RBP26.95■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms