RNA–Protein interactions for RNA: ENST00000556501.1

GPHN-213, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-213ENST00000556501 POLA1P09884 1462 aaPredicted RBP8.16□□□□□ -1.1
GPHN-213ENST00000556501 CTTNBP2Q8WZ74 1663 aa8.16□□□□□ -1.1
GPHN-213ENST00000556501 NESP48681 1621 aa8.15□□□□□ -1.1
GPHN-213ENST00000556501 TIAM1Q13009 1591 aa8.15□□□□□ -1.1
GPHN-213ENST00000556501 CARMIL1Q5VZK9 1371 aa8.15□□□□□ -1.1
GPHN-213ENST00000556501 RRBP1Q9P2E9 1410 aaKnown RBP8.14□□□□□ -1.11
GPHN-213ENST00000556501 ABCA5Q8WWZ7 1642 aa8.14□□□□□ -1.11
GPHN-213ENST00000556501 EFCAB5A4FU69 1503 aa8.13□□□□□ -1.11
GPHN-213ENST00000556501 URB2Q14146 1524 aaKnown RBP8.13□□□□□ -1.11
GPHN-213ENST00000556501 SLC24A1O60721 1099 aa8.12□□□□□ -1.11
GPHN-213ENST00000556501 RANGAP1P46060 587 aaPredicted RBP8.12□□□□□ -1.11
GPHN-213ENST00000556501 PCF11O94913 1555 aaKnown RBP8.12□□□□□ -1.11
GPHN-213ENST00000556501 RAD54L2Q9Y4B4 1467 aa8.12□□□□□ -1.11
GPHN-213ENST00000556501 KIF21AQ7Z4S6 1674 aa8.11□□□□□ -1.11
GPHN-213ENST00000556501 HNRNPUL2Q1KMD3 747 aaKnown RBP8.1□□□□□ -1.11
GPHN-213ENST00000556501 CNKSR2Q8WXI2 1034 aa8.09□□□□□ -1.11
GPHN-213ENST00000556501 FHAD1B1AJZ9 1412 aa8.09□□□□□ -1.11
GPHN-213ENST00000556501 AQRO60306 1485 aaKnown RBP eCLIP8.08□□□□□ -1.12
GPHN-213ENST00000556501 FYCO1Q9BQS8 1478 aa8.08□□□□□ -1.12
GPHN-213ENST00000556501 KANK4Q5T7N3 995 aaPredicted RBP8.08□□□□□ -1.12
GPHN-213ENST00000556501 LRRC9Q6ZRR7 1453 aa8.07□□□□□ -1.12
GPHN-213ENST00000556501 CLSPNQ9HAW4 1339 aa8.07□□□□□ -1.12
GPHN-213ENST00000556501 SAMD9Q5K651 1589 aa8.07□□□□□ -1.12
GPHN-213ENST00000556501 PDS5BQ9NTI5 1447 aa8.07□□□□□ -1.12
GPHN-213ENST00000556501 MAPK8IP2Q13387 824 aaPredicted RBP8.07□□□□□ -1.12
GPHN-213ENST00000556501 CCNB3Q8WWL7 1395 aa8.07□□□□□ -1.12
GPHN-213ENST00000556501 TARBP1Q13395 1621 aaKnown RBP8.07□□□□□ -1.12
GPHN-213ENST00000556501 PBRM1Q86U86 1689 aa8.05□□□□□ -1.12
GPHN-213ENST00000556501 DHX57Q6P158 1386 aaKnown RBP8.05□□□□□ -1.12
GPHN-213ENST00000556501 THOC2Q8NI27 1593 aaKnown RBP8.05□□□□□ -1.12
GPHN-213ENST00000556501 CASKIN1Q8WXD9 1431 aa8.04□□□□□ -1.12
GPHN-213ENST00000556501 GAPVD1Q14C86 1478 aa8.03□□□□□ -1.12
GPHN-213ENST00000556501 SNAPC4Q5SXM2 1469 aa8.03□□□□□ -1.12
GPHN-213ENST00000556501 ZNF316A6NFI3 1004 aaPredicted RBP8.03□□□□□ -1.12
GPHN-213ENST00000556501 DIEXFQ68CQ4 756 aaKnown RBP8.03□□□□□ -1.12
GPHN-213ENST00000556501 DMRT2Q9Y5R5 561 aa8.03□□□□□ -1.12
GPHN-213ENST00000556501 FHOD3Q2V2M9 1422 aa8.03□□□□□ -1.12
GPHN-213ENST00000556501 SCAF1Q9H7N4 1312 aaKnown RBP8.02□□□□□ -1.13
GPHN-213ENST00000556501 LRRIQ1Q96JM4 1722 aa8.01□□□□□ -1.13
GPHN-213ENST00000556501 FMN1Q68DA7 1419 aa8.01□□□□□ -1.13
GPHN-213ENST00000556501 ADAMTS12P58397 1594 aa8.01□□□□□ -1.13
GPHN-213ENST00000556501 PHLDB1Q86UU1 1377 aa8□□□□□ -1.13
GPHN-213ENST00000556501 AMER1Q5JTC6 1135 aaPredicted RBP8□□□□□ -1.13
GPHN-213ENST00000556501 RTN4Q9NQC3 1192 aaKnown RBP8□□□□□ -1.13
GPHN-213ENST00000556501 FOXD4L1Q9NU39 408 aa8□□□□□ -1.13
GPHN-213ENST00000556501 MRC2Q9UBG0 1479 aa8□□□□□ -1.13
GPHN-213ENST00000556501 GRIN2BQ13224 1484 aa7.99□□□□□ -1.13
GPHN-213ENST00000556501 MAPKBP1O60336 1514 aa7.98□□□□□ -1.13
GPHN-213ENST00000556501 TDRD9Q8NDG6 1382 aaKnown RBP7.97□□□□□ -1.13
GPHN-213ENST00000556501 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.97□□□□□ -1.13
GPHN-213ENST00000556501 EHBP1L1Q8N3D4 1523 aa7.97□□□□□ -1.13
GPHN-213ENST00000556501 IQGAP2Q13576 1575 aa7.97□□□□□ -1.13
GPHN-213ENST00000556501 WDR62O43379 1518 aa7.96□□□□□ -1.14
GPHN-213ENST00000556501 HECW1Q76N89 1606 aa7.96□□□□□ -1.14
GPHN-213ENST00000556501 RAB3GAP2Q9H2M9 1393 aa7.96□□□□□ -1.14
GPHN-213ENST00000556501 SETD5Q9C0A6 1442 aa7.95□□□□□ -1.14
GPHN-213ENST00000556501 SUPT6HQ7KZ85 1726 aaKnown RBP7.95□□□□□ -1.14
GPHN-213ENST00000556501 DNAJC5BQ9UF47 199 aa7.95□□□□□ -1.14
GPHN-213ENST00000556501 FGD6Q6ZV73 1430 aa7.95□□□□□ -1.14
GPHN-213ENST00000556501 CCDC18Q5T9S5 1454 aa7.94□□□□□ -1.14
GPHN-213ENST00000556501 ARHGEF11O15085 1522 aa7.93□□□□□ -1.14
GPHN-213ENST00000556501 P3H3Q8IVL6 736 aa7.93□□□□□ -1.14
GPHN-213ENST00000556501 IFT140Q96RY7 1462 aa7.93□□□□□ -1.14
GPHN-213ENST00000556501 UGGT2Q9NYU1 1516 aa7.93□□□□□ -1.14
GPHN-213ENST00000556501 ACIN1Q9UKV3 1341 aaKnown RBP7.92□□□□□ -1.14
GPHN-213ENST00000556501 CENPBP07199 599 aaPredicted RBP7.91□□□□□ -1.14
GPHN-213ENST00000556501 NCOA2Q15596 1464 aa7.91□□□□□ -1.14
GPHN-213ENST00000556501 EIF4G3O43432 1585 aaKnown RBP7.91□□□□□ -1.14
GPHN-213ENST00000556501 GCC2Q8IWJ2 1684 aa7.9□□□□□ -1.14
GPHN-213ENST00000556501 PTPN23Q9H3S7 1636 aa7.9□□□□□ -1.14
GPHN-213ENST00000556501 MAGI3Q5TCQ9 1506 aa7.9□□□□□ -1.14
GPHN-213ENST00000556501 MYOM3Q5VTT5 1437 aa7.9□□□□□ -1.14
GPHN-213ENST00000556501 MTUS2Q5JR59 1369 aa7.9□□□□□ -1.14
GPHN-213ENST00000556501 ITGAEP38570 1179 aa7.89□□□□□ -1.15
GPHN-213ENST00000556501 KIAA0556O60303 1618 aa7.89□□□□□ -1.15
GPHN-213ENST00000556501 TCOF1Q13428 1488 aaKnown RBP7.88□□□□□ -1.15
GPHN-213ENST00000556501 NEUROD1Q13562 356 aa7.88□□□□□ -1.15
GPHN-213ENST00000556501 FAM50AQ14320 339 aaKnown RBP7.88□□□□□ -1.15
GPHN-213ENST00000556501 ZNF608Q9ULD9 1512 aaPredicted RBP7.88□□□□□ -1.15
GPHN-213ENST00000556501 HFM1A2PYH4 1435 aa7.87□□□□□ -1.15
GPHN-213ENST00000556501 CACNB1Q02641 598 aaPredicted RBP7.87□□□□□ -1.15
GPHN-213ENST00000556501 EPRSP07814 1512 aaKnown RBP7.87□□□□□ -1.15
GPHN-213ENST00000556501 KIAA0586Q9BVV6 1533 aa7.87□□□□□ -1.15
GPHN-213ENST00000556501 ATP1B4Q9UN42 357 aaPredicted RBP7.86□□□□□ -1.15
GPHN-213ENST00000556501 GRIN2AQ12879 1464 aa7.86□□□□□ -1.15
GPHN-213ENST00000556501 AKNAQ7Z591 1439 aa7.86□□□□□ -1.15
GPHN-213ENST00000556501 CDK13Q14004 1512 aaKnown RBP7.85□□□□□ -1.15
GPHN-213ENST00000556501 DISP1Q96F81 1524 aa7.85□□□□□ -1.15
GPHN-213ENST00000556501 MIER1Q8N108 512 aa7.85□□□□□ -1.15
GPHN-213ENST00000556501 MAGI1Q96QZ7 1491 aaPredicted RBP7.85□□□□□ -1.15
GPHN-213ENST00000556501 PTPRKQ15262 1439 aa7.85□□□□□ -1.15
GPHN-213ENST00000556501 RAPGEF6Q8TEU7 1601 aa7.85□□□□□ -1.15
GPHN-213ENST00000556501 UACAQ9BZF9 1416 aa7.84□□□□□ -1.15
GPHN-213ENST00000556501 TIMELESSQ9UNS1 1208 aa7.83□□□□□ -1.16
GPHN-213ENST00000556501 NAIPQ13075 1403 aa7.83□□□□□ -1.16
GPHN-213ENST00000556501 CEP170Q5SW79 1584 aa7.82□□□□□ -1.16
GPHN-213ENST00000556501 MIA2Q96PC5 1412 aa7.82□□□□□ -1.16
GPHN-213ENST00000556501 ADCY10Q96PN6 1610 aa7.81□□□□□ -1.16
GPHN-213ENST00000556501 ERCC6Q03468 1493 aa7.81□□□□□ -1.16
GPHN-213ENST00000556501 DNMT1P26358 1616 aaKnown RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms