RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 GRIN2AQ12879 1464 aa17.1■□□□□ 0.33
LINC01550-206ENST00000556462 CTTNBP2Q8WZ74 1663 aa17.09■□□□□ 0.33
LINC01550-206ENST00000556462 ARAP1Q96P48 1450 aa17.08■□□□□ 0.33
LINC01550-206ENST00000556462 FBLN2P98095 1184 aa17.07■□□□□ 0.32
LINC01550-206ENST00000556462 VPS8Q8N3P4 1428 aa17.07■□□□□ 0.32
LINC01550-206ENST00000556462 KIAA0586Q9BVV6 1533 aa17.02■□□□□ 0.32
LINC01550-206ENST00000556462 NUP160Q12769 1436 aa17■□□□□ 0.31
LINC01550-206ENST00000556462 P3H3Q8IVL6 736 aa17■□□□□ 0.31
LINC01550-206ENST00000556462 IQGAP2Q13576 1575 aa17■□□□□ 0.31
LINC01550-206ENST00000556462 EFCAB5A4FU69 1503 aa16.99■□□□□ 0.31
LINC01550-206ENST00000556462 CEP170Q5SW79 1584 aa16.99■□□□□ 0.31
LINC01550-206ENST00000556462 SAMD9Q5K651 1589 aa16.96■□□□□ 0.31
LINC01550-206ENST00000556462 FHOD3Q2V2M9 1422 aa16.96■□□□□ 0.31
LINC01550-206ENST00000556462 PPARGC1BQ86YN6 1023 aaKnown RBP16.96■□□□□ 0.31
LINC01550-206ENST00000556462 UGGT2Q9NYU1 1516 aa16.94■□□□□ 0.3
LINC01550-206ENST00000556462 CHD1O14646 1710 aa16.91■□□□□ 0.3
LINC01550-206ENST00000556462 JPH4Q96JJ6 628 aa16.9■□□□□ 0.3
LINC01550-206ENST00000556462 DISP1Q96F81 1524 aa16.88■□□□□ 0.29
LINC01550-206ENST00000556462 APLP2Q06481 763 aa16.87■□□□□ 0.29
LINC01550-206ENST00000556462 FMN1Q68DA7 1419 aa16.87■□□□□ 0.29
LINC01550-206ENST00000556462 TRIM26Q12899 539 aaPredicted RBP16.86■□□□□ 0.29
LINC01550-206ENST00000556462 CASKIN1Q8WXD9 1431 aa16.83■□□□□ 0.29
LINC01550-206ENST00000556462 KIAA0556O60303 1618 aa16.83■□□□□ 0.28
LINC01550-206ENST00000556462 PCGF6Q9BYE7 350 aa16.83■□□□□ 0.28
LINC01550-206ENST00000556462 PCF11O94913 1555 aaKnown RBP16.82■□□□□ 0.28
LINC01550-206ENST00000556462 TTBK1Q5TCY1 1321 aaPredicted RBP16.82■□□□□ 0.28
LINC01550-206ENST00000556462 KANK4Q5T7N3 995 aaPredicted RBP16.81■□□□□ 0.28
LINC01550-206ENST00000556462 FYCO1Q9BQS8 1478 aa16.8■□□□□ 0.28
LINC01550-206ENST00000556462 CARMIL2Q6F5E8 1435 aa16.79■□□□□ 0.28
LINC01550-206ENST00000556462 ATP1B4Q9UN42 357 aaPredicted RBP16.79■□□□□ 0.28
LINC01550-206ENST00000556462 MAP3K1Q13233 1512 aa16.78■□□□□ 0.28
LINC01550-206ENST00000556462 PRG4Q92954 1404 aaPredicted RBP16.77■□□□□ 0.27
LINC01550-206ENST00000556462 CLASP1Q7Z460 1538 aa16.76■□□□□ 0.27
LINC01550-206ENST00000556462 SHROOM2Q13796 1616 aa16.74■□□□□ 0.27
LINC01550-206ENST00000556462 TIAM1Q13009 1591 aa16.74■□□□□ 0.27
LINC01550-206ENST00000556462 LRRC9Q6ZRR7 1453 aa16.7■□□□□ 0.26
LINC01550-206ENST00000556462 OSCARQ8IYS5 282 aa16.69■□□□□ 0.26
LINC01550-206ENST00000556462 CFAP43Q8NDM7 1665 aa16.68■□□□□ 0.26
LINC01550-206ENST00000556462 LRRIQ1Q96JM4 1722 aa16.67■□□□□ 0.26
LINC01550-206ENST00000556462 PLB1Q6P1J6 1458 aa16.67■□□□□ 0.26
LINC01550-206ENST00000556462 ERCC6L2Q5T890 1561 aa16.66■□□□□ 0.26
LINC01550-206ENST00000556462 HECW1Q76N89 1606 aa16.66■□□□□ 0.26
LINC01550-206ENST00000556462 PTPRGP23470 1445 aa16.66■□□□□ 0.26
LINC01550-206ENST00000556462 EPRSP07814 1512 aaKnown RBP16.66■□□□□ 0.26
LINC01550-206ENST00000556462 NUP153P49790 1475 aaKnown RBP16.65■□□□□ 0.26
LINC01550-206ENST00000556462 RAPGEF6Q8TEU7 1601 aa16.64■□□□□ 0.25
LINC01550-206ENST00000556462 CCDC18Q5T9S5 1454 aa16.64■□□□□ 0.25
LINC01550-206ENST00000556462 ARID3CA6NKF2 412 aa16.61■□□□□ 0.25
LINC01550-206ENST00000556462 ABCA8O94911 1581 aa16.61■□□□□ 0.25
LINC01550-206ENST00000556462 CDK13Q14004 1512 aaKnown RBP16.61■□□□□ 0.25
LINC01550-206ENST00000556462 MTUS2Q5JR59 1369 aa16.6■□□□□ 0.25
LINC01550-206ENST00000556462 MAGI3Q5TCQ9 1506 aa16.58■□□□□ 0.25
LINC01550-206ENST00000556462 PHLDB1Q86UU1 1377 aa16.56■□□□□ 0.24
LINC01550-206ENST00000556462 UACAQ9BZF9 1416 aa16.55■□□□□ 0.24
LINC01550-206ENST00000556462 RRBP1Q9P2E9 1410 aaKnown RBP16.55■□□□□ 0.24
LINC01550-206ENST00000556462 EHBP1L1Q8N3D4 1523 aa16.54■□□□□ 0.24
LINC01550-206ENST00000556462 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.54■□□□□ 0.24
LINC01550-206ENST00000556462 HNRNPUL2Q1KMD3 747 aaKnown RBP16.54■□□□□ 0.24
LINC01550-206ENST00000556462 ATP10BO94823 1461 aa16.53■□□□□ 0.24
LINC01550-206ENST00000556462 CDK11AQ9UQ88 783 aaPredicted RBP16.52■□□□□ 0.24
LINC01550-206ENST00000556462 NCOA2Q15596 1464 aa16.51■□□□□ 0.23
LINC01550-206ENST00000556462 CCNB3Q8WWL7 1395 aa16.5■□□□□ 0.23
LINC01550-206ENST00000556462 ARHGEF11O15085 1522 aa16.49■□□□□ 0.23
LINC01550-206ENST00000556462 ABCC2Q92887 1545 aa16.49■□□□□ 0.23
LINC01550-206ENST00000556462 SUPT6HQ7KZ85 1726 aaKnown RBP16.48■□□□□ 0.23
LINC01550-206ENST00000556462 TROQ12816 1431 aaPredicted RBP16.47■□□□□ 0.23
LINC01550-206ENST00000556462 UHRF1BP1LA0JNW5 1464 aa16.47■□□□□ 0.23
LINC01550-206ENST00000556462 PLEKHD1A6NEE1 506 aa16.46■□□□□ 0.22
LINC01550-206ENST00000556462 MYOM3Q5VTT5 1437 aa16.43■□□□□ 0.22
LINC01550-206ENST00000556462 FGD6Q6ZV73 1430 aa16.43■□□□□ 0.22
LINC01550-206ENST00000556462 KDM5BQ9UGL1 1544 aa16.41■□□□□ 0.22
LINC01550-206ENST00000556462 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.4■□□□□ 0.22
LINC01550-206ENST00000556462 FAM50AQ14320 339 aaKnown RBP16.39■□□□□ 0.21
LINC01550-206ENST00000556462 ADCY10Q96PN6 1610 aa16.38■□□□□ 0.21
LINC01550-206ENST00000556462 KIF14Q15058 1648 aa16.37■□□□□ 0.21
LINC01550-206ENST00000556462 MIA2Q96PC5 1412 aa16.36■□□□□ 0.21
LINC01550-206ENST00000556462 ZCCHC11Q5TAX3 1644 aaKnown RBP16.35■□□□□ 0.21
LINC01550-206ENST00000556462 ITGAEP38570 1179 aa16.35■□□□□ 0.21
LINC01550-206ENST00000556462 ABCC10Q5T3U5 1492 aa16.34■□□□□ 0.21
LINC01550-206ENST00000556462 GPATCH8Q9UKJ3 1502 aaKnown RBP16.33■□□□□ 0.2
LINC01550-206ENST00000556462 TCOF1Q13428 1488 aaKnown RBP16.32■□□□□ 0.2
LINC01550-206ENST00000556462 PTPN23Q9H3S7 1636 aa16.32■□□□□ 0.2
LINC01550-206ENST00000556462 CFDP1Q9UEE9 299 aaPredicted RBP16.29■□□□□ 0.2
LINC01550-206ENST00000556462 ZNF644Q9H582 1327 aaPredicted RBP16.28■□□□□ 0.2
LINC01550-206ENST00000556462 KCNH8Q96L42 1107 aa16.28■□□□□ 0.2
LINC01550-206ENST00000556462 RIMBP3CA6NJZ7 1639 aa16.28■□□□□ 0.2
LINC01550-206ENST00000556462 RIMBP3BA6NNM3 1639 aa16.28■□□□□ 0.2
LINC01550-206ENST00000556462 RIMBP3Q9UFD9 1639 aa16.28■□□□□ 0.2
LINC01550-206ENST00000556462 CYB5RLQ6IPT4 315 aa16.28■□□□□ 0.2
LINC01550-206ENST00000556462 PTPRKQ15262 1439 aa16.27■□□□□ 0.2
LINC01550-206ENST00000556462 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.25■□□□□ 0.19
LINC01550-206ENST00000556462 NPM1P06748 294 aaKnown RBP eCLIP16.25■□□□□ 0.19
LINC01550-206ENST00000556462 HRCP23327 699 aa16.25■□□□□ 0.19
LINC01550-206ENST00000556462 ITSN2Q9NZM3 1697 aa16.24■□□□□ 0.19
LINC01550-206ENST00000556462 WDR7Q9Y4E6 1490 aa16.24■□□□□ 0.19
LINC01550-206ENST00000556462 CDC42BPAQ5VT25 1732 aa16.24■□□□□ 0.19
LINC01550-206ENST00000556462 ASXL2Q76L83 1435 aa16.23■□□□□ 0.19
LINC01550-206ENST00000556462 ZNF777Q9ULD5 760 aaPredicted RBP16.22■□□□□ 0.19
LINC01550-206ENST00000556462 TTC37Q6PGP7 1564 aa16.22■□□□□ 0.19
LINC01550-206ENST00000556462 CAMSAP2Q08AD1 1489 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms