RNA–Protein interactions for RNA: ENST00000556454.1

CLMN-207, Transcript of calmin, humanhuman

TSL 2

Gene CLMN, Length 3,023 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMN-207ENST00000556454 SYNJ1O43426 1573 aa14.33□□□□□ -0.12
CLMN-207ENST00000556454 CCDC136Q96JN2 1154 aa14.33□□□□□ -0.12
CLMN-207ENST00000556454 ARAP1Q96P48 1450 aa14.32□□□□□ -0.12
CLMN-207ENST00000556454 SMARCA4P51532 1647 aa14.32□□□□□ -0.12
CLMN-207ENST00000556454 BICRAQ9NZM4 1560 aa14.31□□□□□ -0.12
CLMN-207ENST00000556454 IL27Q8NEV9 243 aa14.31□□□□□ -0.12
CLMN-207ENST00000556454 CCNB3Q8WWL7 1395 aa14.31□□□□□ -0.12
CLMN-207ENST00000556454 IRX6P78412 446 aaPredicted RBP14.31□□□□□ -0.12
CLMN-207ENST00000556454 RAB3GAP2Q9H2M9 1393 aa14.3□□□□□ -0.12
CLMN-207ENST00000556454 KANK4Q5T7N3 995 aaPredicted RBP14.29□□□□□ -0.12
CLMN-207ENST00000556454 TIMELESSQ9UNS1 1208 aa14.27□□□□□ -0.12
CLMN-207ENST00000556454 RTL5Q5HYW3 569 aaPredicted RBP14.25□□□□□ -0.13
CLMN-207ENST00000556454 WASHC2AQ641Q2 1341 aa14.24□□□□□ -0.13
CLMN-207ENST00000556454 HNRNPUQ00839 825 aaKnown RBP eCLIP14.23□□□□□ -0.13
CLMN-207ENST00000556454 ERICH3Q5RHP9 1530 aa14.23□□□□□ -0.13
CLMN-207ENST00000556454 IPO9Q96P70 1041 aaKnown RBP14.22□□□□□ -0.13
CLMN-207ENST00000556454 C11orf95C9JLR9 678 aaPredicted RBP14.21□□□□□ -0.13
CLMN-207ENST00000556454 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.21□□□□□ -0.13
CLMN-207ENST00000556454 SETD5Q9C0A6 1442 aa14.21□□□□□ -0.14
CLMN-207ENST00000556454 B4GALNT3Q6L9W6 998 aa14.19□□□□□ -0.14
CLMN-207ENST00000556454 RTN4Q9NQC3 1192 aaKnown RBP14.18□□□□□ -0.14
CLMN-207ENST00000556454 SIN3AQ96ST3 1273 aa14.17□□□□□ -0.14
CLMN-207ENST00000556454 ANP32AP39687 249 aaKnown RBP14.17□□□□□ -0.14
CLMN-207ENST00000556454 WASHC2CQ9Y4E1 1318 aa14.16□□□□□ -0.14
CLMN-207ENST00000556454 NCAPD3P42695 1498 aa14.15□□□□□ -0.14
CLMN-207ENST00000556454 HIRIP3Q9BW71 556 aaPredicted RBP14.15□□□□□ -0.14
CLMN-207ENST00000556454 ZBTB47Q9UFB7 747 aaPredicted RBP14.15□□□□□ -0.14
CLMN-207ENST00000556454 PEG3Q9GZU2 1588 aa14.14□□□□□ -0.15
CLMN-207ENST00000556454 PRXQ9BXM0 1461 aa14.13□□□□□ -0.15
CLMN-207ENST00000556454 RANGAP1P46060 587 aaPredicted RBP14.12□□□□□ -0.15
CLMN-207ENST00000556454 USP35Q9P2H5 1018 aa14.12□□□□□ -0.15
CLMN-207ENST00000556454 MAP3K1Q13233 1512 aa14.1□□□□□ -0.15
CLMN-207ENST00000556454 ZBED9Q6R2W3 1325 aa14.07□□□□□ -0.16
CLMN-207ENST00000556454 TOP2BQ02880 1626 aa14.07□□□□□ -0.16
CLMN-207ENST00000556454 TIAM1Q13009 1591 aa14.06□□□□□ -0.16
CLMN-207ENST00000556454 FHAD1B1AJZ9 1412 aa14.06□□□□□ -0.16
CLMN-207ENST00000556454 NCOA2Q15596 1464 aa14.04□□□□□ -0.16
CLMN-207ENST00000556454 ARHGAP35Q9NRY4 1499 aa14.04□□□□□ -0.16
CLMN-207ENST00000556454 BIVM-ERCC5R4GMW8 1640 aa14.03□□□□□ -0.16
CLMN-207ENST00000556454 RNF123Q5XPI4 1314 aa14.01□□□□□ -0.17
CLMN-207ENST00000556454 KDM5BQ9UGL1 1544 aa14.01□□□□□ -0.17
CLMN-207ENST00000556454 NEFMP07197 916 aa14.01□□□□□ -0.17
CLMN-207ENST00000556454 TONSLQ96HA7 1378 aa14□□□□□ -0.17
CLMN-207ENST00000556454 SMG6Q86US8 1419 aaKnown RBP13.99□□□□□ -0.17
CLMN-207ENST00000556454 PKNOX2Q96KN3 472 aa13.99□□□□□ -0.17
CLMN-207ENST00000556454 BRPF3Q9ULD4 1205 aa13.99□□□□□ -0.17
CLMN-207ENST00000556454 CNTLNQ9NXG0 1405 aa13.98□□□□□ -0.17
CLMN-207ENST00000556454 CCDC184Q52MB2 194 aa13.98□□□□□ -0.17
CLMN-207ENST00000556454 PPM1GO15355 546 aaPredicted RBP13.97□□□□□ -0.17
CLMN-207ENST00000556454 LRRC9Q6ZRR7 1453 aa13.97□□□□□ -0.17
CLMN-207ENST00000556454 PHLDB1Q86UU1 1377 aa13.97□□□□□ -0.17
CLMN-207ENST00000556454 CFAP43Q8NDM7 1665 aa13.95□□□□□ -0.18
CLMN-207ENST00000556454 EIF5BO60841 1220 aaKnown RBP13.95□□□□□ -0.18
CLMN-207ENST00000556454 RSPH6AQ9H0K4 717 aa13.95□□□□□ -0.18
CLMN-207ENST00000556454 AKNAQ7Z591 1439 aa13.95□□□□□ -0.18
CLMN-207ENST00000556454 LAS1LQ9Y4W2 734 aaKnown RBP13.94□□□□□ -0.18
CLMN-207ENST00000556454 GSE1Q14687 1217 aa13.93□□□□□ -0.18
CLMN-207ENST00000556454 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.92□□□□□ -0.18
CLMN-207ENST00000556454 PRKRIP1Q9H875 184 aaPredicted RBP13.91□□□□□ -0.18
CLMN-207ENST00000556454 PABPN1Q86U42 306 aaKnown RBP eCLIP13.9□□□□□ -0.18
CLMN-207ENST00000556454 FAM9BQ8IZU0 186 aa13.9□□□□□ -0.18
CLMN-207ENST00000556454 NUDCQ9Y266 331 aa13.88□□□□□ -0.19
CLMN-207ENST00000556454 UACAQ9BZF9 1416 aa13.88□□□□□ -0.19
CLMN-207ENST00000556454 ABCA5Q8WWZ7 1642 aa13.88□□□□□ -0.19
CLMN-207ENST00000556454 MRS2Q9HD23 443 aa13.88□□□□□ -0.19
CLMN-207ENST00000556454 FAM43AQ8N2R8 423 aa13.88□□□□□ -0.19
CLMN-207ENST00000556454 TCERG1O14776 1098 aaKnown RBP13.87□□□□□ -0.19
CLMN-207ENST00000556454 POLR1AO95602 1720 aaPredicted RBP13.87□□□□□ -0.19
CLMN-207ENST00000556454 HSPA5P11021 654 aaKnown RBP13.87□□□□□ -0.19
CLMN-207ENST00000556454 FAM50AQ14320 339 aaKnown RBP13.87□□□□□ -0.19
CLMN-207ENST00000556454 CCDC18Q5T9S5 1454 aa13.87□□□□□ -0.19
CLMN-207ENST00000556454 NCOA1Q15788 1441 aa13.86□□□□□ -0.19
CLMN-207ENST00000556454 NPM2Q86SE8 214 aaKnown RBP13.85□□□□□ -0.19
CLMN-207ENST00000556454 BACH2Q9BYV9 841 aa13.84□□□□□ -0.19
CLMN-207ENST00000556454 PDE4AP27815 886 aa13.84□□□□□ -0.19
CLMN-207ENST00000556454 PTPN23Q9H3S7 1636 aa13.83□□□□□ -0.19
CLMN-207ENST00000556454 MS4A1P11836 297 aa13.83□□□□□ -0.19
CLMN-207ENST00000556454 FRAT1Q92837 279 aaPredicted RBP13.82□□□□□ -0.2
CLMN-207ENST00000556454 CCDC7Q96M83 1385 aa13.82□□□□□ -0.2
CLMN-207ENST00000556454 KIF27Q86VH2 1401 aa13.82□□□□□ -0.2
CLMN-207ENST00000556454 HFM1A2PYH4 1435 aa13.81□□□□□ -0.2
CLMN-207ENST00000556454 NFKBIBQ15653 356 aa13.81□□□□□ -0.2
CLMN-207ENST00000556454 DDRGK1Q96HY6 314 aa13.8□□□□□ -0.2
CLMN-207ENST00000556454 GLIPR1L2Q4G1C9 344 aa13.8□□□□□ -0.2
CLMN-207ENST00000556454 PCF11O94913 1555 aaKnown RBP13.79□□□□□ -0.2
CLMN-207ENST00000556454 EIF4G2P78344 907 aaKnown RBP eCLIP13.79□□□□□ -0.2
CLMN-207ENST00000556454 AQRO60306 1485 aaKnown RBP eCLIP13.75□□□□□ -0.21
CLMN-207ENST00000556454 CUX1P39880 1505 aa13.74□□□□□ -0.21
CLMN-207ENST00000556454 HECW1Q76N89 1606 aa13.73□□□□□ -0.21
CLMN-207ENST00000556454 FGD6Q6ZV73 1430 aa13.73□□□□□ -0.21
CLMN-207ENST00000556454 ZMYND15Q9H091 742 aa13.73□□□□□ -0.21
CLMN-207ENST00000556454 NAIPQ13075 1403 aa13.73□□□□□ -0.21
CLMN-207ENST00000556454 DCAF11Q8TEB1 546 aa13.72□□□□□ -0.21
CLMN-207ENST00000556454 PTPRKQ15262 1439 aa13.72□□□□□ -0.21
CLMN-207ENST00000556454 ATAD2BQ9ULI0 1458 aa13.71□□□□□ -0.22
CLMN-207ENST00000556454 RRP1P56182 461 aaKnown RBP13.7□□□□□ -0.22
CLMN-207ENST00000556454 DENND4BO75064 1496 aaPredicted RBP13.7□□□□□ -0.22
CLMN-207ENST00000556454 FYCO1Q9BQS8 1478 aa13.7□□□□□ -0.22
CLMN-207ENST00000556454 FMN1Q68DA7 1419 aa13.69□□□□□ -0.22
CLMN-207ENST00000556454 SPATA31E1Q6ZUB1 1445 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms