RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 JPH4Q96JJ6 628 aa23.44■■□□□ 1.34
TGFB3-204ENST00000556285 ADCY10Q96PN6 1610 aa23.41■■□□□ 1.34
TGFB3-204ENST00000556285 CUL7Q14999 1698 aa23.35■■□□□ 1.33
TGFB3-204ENST00000556285 IGF1RP08069 1367 aa23.35■■□□□ 1.33
TGFB3-204ENST00000556285 DIP2BQ9P265 1576 aa23.31■■□□□ 1.32
TGFB3-204ENST00000556285 KIAA0586Q9BVV6 1533 aa23.3■■□□□ 1.32
TGFB3-204ENST00000556285 KIF27Q86VH2 1401 aa23.28■■□□□ 1.32
TGFB3-204ENST00000556285 MAPKBP1O60336 1514 aa23.28■■□□□ 1.32
TGFB3-204ENST00000556285 AEBP2Q6ZN18 517 aaPredicted RBP23.27■■□□□ 1.32
TGFB3-204ENST00000556285 ABCC10Q5T3U5 1492 aa23.27■■□□□ 1.32
TGFB3-204ENST00000556285 TSPOAP1O95153 1857 aa23.24■■□□□ 1.31
TGFB3-204ENST00000556285 FAM69CQ0P6D2 419 aa23.2■■□□□ 1.3
TGFB3-204ENST00000556285 CARMIL1Q5VZK9 1371 aa23.16■■□□□ 1.3
TGFB3-204ENST00000556285 IQGAP2Q13576 1575 aa23.12■■□□□ 1.29
TGFB3-204ENST00000556285 NPM1P06748 294 aaKnown RBP eCLIP23.1■■□□□ 1.29
TGFB3-204ENST00000556285 PPRC1Q5VV67 1664 aaKnown RBP23.09■■□□□ 1.29
TGFB3-204ENST00000556285 TTBK1Q5TCY1 1321 aaPredicted RBP23.09■■□□□ 1.29
TGFB3-204ENST00000556285 KDM6BO15054 1643 aa23.09■■□□□ 1.29
TGFB3-204ENST00000556285 PTPRGP23470 1445 aa23.08■■□□□ 1.28
TGFB3-204ENST00000556285 DISP1Q96F81 1524 aa23.07■■□□□ 1.28
TGFB3-204ENST00000556285 ABCC2Q92887 1545 aa23.03■■□□□ 1.28
TGFB3-204ENST00000556285 TNIKQ9UKE5 1360 aa23.02■■□□□ 1.28
TGFB3-204ENST00000556285 CARMIL2Q6F5E8 1435 aa22.99■■□□□ 1.27
TGFB3-204ENST00000556285 ASXL2Q76L83 1435 aa22.98■■□□□ 1.27
TGFB3-204ENST00000556285 KIAA0556O60303 1618 aa22.97■■□□□ 1.27
TGFB3-204ENST00000556285 UHRF1BP1LA0JNW5 1464 aa22.96■■□□□ 1.27
TGFB3-204ENST00000556285 UGGT2Q9NYU1 1516 aa22.96■■□□□ 1.27
TGFB3-204ENST00000556285 ZCCHC11Q5TAX3 1644 aaKnown RBP22.95■■□□□ 1.26
TGFB3-204ENST00000556285 RAPGEF2Q9Y4G8 1499 aa22.95■■□□□ 1.26
TGFB3-204ENST00000556285 GLI2P10070 1586 aa22.94■■□□□ 1.26
TGFB3-204ENST00000556285 CTTNBP2Q8WZ74 1663 aa22.93■■□□□ 1.26
TGFB3-204ENST00000556285 KDM4FA0A1W2PPD8 638 aa22.93■■□□□ 1.26
TGFB3-204ENST00000556285 UACAQ9BZF9 1416 aa22.92■■□□□ 1.26
TGFB3-204ENST00000556285 MAP3K4Q9Y6R4 1608 aa22.9■■□□□ 1.26
TGFB3-204ENST00000556285 KDM5BQ9UGL1 1544 aa22.89■■□□□ 1.26
TGFB3-204ENST00000556285 PLB1Q6P1J6 1458 aa22.88■■□□□ 1.25
TGFB3-204ENST00000556285 COL17A1Q9UMD9 1497 aaPredicted RBP22.86■■□□□ 1.25
TGFB3-204ENST00000556285 EPRSP07814 1512 aaKnown RBP22.86■■□□□ 1.25
TGFB3-204ENST00000556285 ABCA8O94911 1581 aa22.76■■□□□ 1.23
TGFB3-204ENST00000556285 PRXQ9BXM0 1461 aa22.73■■□□□ 1.23
TGFB3-204ENST00000556285 WDR7Q9Y4E6 1490 aa22.72■■□□□ 1.23
TGFB3-204ENST00000556285 ADGRL1O94910 1474 aa22.7■■□□□ 1.22
TGFB3-204ENST00000556285 CFAP43Q8NDM7 1665 aa22.67■■□□□ 1.22
TGFB3-204ENST00000556285 TEX14Q8IWB6 1497 aa22.65■■□□□ 1.22
TGFB3-204ENST00000556285 GOLGA3Q08378 1498 aa22.63■■□□□ 1.21
TGFB3-204ENST00000556285 MAGI3Q5TCQ9 1506 aa22.57■■□□□ 1.2
TGFB3-204ENST00000556285 SAMD9Q5K651 1589 aa22.56■■□□□ 1.2
TGFB3-204ENST00000556285 KCNH8Q96L42 1107 aa22.56■■□□□ 1.2
TGFB3-204ENST00000556285 CD109Q6YHK3 1445 aa22.56■■□□□ 1.2
TGFB3-204ENST00000556285 ARID3CA6NKF2 412 aa22.55■■□□□ 1.2
TGFB3-204ENST00000556285 P3H3Q8IVL6 736 aa22.55■■□□□ 1.2
TGFB3-204ENST00000556285 KIF21BO75037 1637 aa22.53■■□□□ 1.2
TGFB3-204ENST00000556285 ATP10BO94823 1461 aa22.53■■□□□ 1.2
TGFB3-204ENST00000556285 CSRNP3Q8WYN3 585 aa22.52■■□□□ 1.2
TGFB3-204ENST00000556285 HECW2Q9P2P5 1572 aa22.49■■□□□ 1.19
TGFB3-204ENST00000556285 RAPGEF6Q8TEU7 1601 aa22.48■■□□□ 1.19
TGFB3-204ENST00000556285 ABCA9Q8IUA7 1624 aa22.47■■□□□ 1.19
TGFB3-204ENST00000556285 FAM9AQ8IZU1 332 aaPredicted RBP22.4■■□□□ 1.18
TGFB3-204ENST00000556285 ARAP3Q8WWN8 1544 aa22.4■■□□□ 1.18
TGFB3-204ENST00000556285 FRMPD1Q5SYB0 1578 aa22.38■■□□□ 1.17
TGFB3-204ENST00000556285 RANGAP1P46060 587 aaPredicted RBP22.38■■□□□ 1.17
TGFB3-204ENST00000556285 NUP153P49790 1475 aaKnown RBP22.38■■□□□ 1.17
TGFB3-204ENST00000556285 FHOD3Q2V2M9 1422 aa22.37■■□□□ 1.17
TGFB3-204ENST00000556285 EEA1Q15075 1411 aa22.36■■□□□ 1.17
TGFB3-204ENST00000556285 ILDR1Q86SU0 546 aaPredicted RBP22.33■■□□□ 1.17
TGFB3-204ENST00000556285 ADAMTSL3P82987 1691 aa22.31■■□□□ 1.16
TGFB3-204ENST00000556285 RAPGEF3O95398 923 aa22.28■■□□□ 1.16
TGFB3-204ENST00000556285 RICTORQ6R327 1708 aa22.27■■□□□ 1.16
TGFB3-204ENST00000556285 BCORL1Q5H9F3 1711 aa22.26■■□□□ 1.15
TGFB3-204ENST00000556285 SIGLEC1Q9BZZ2 1709 aa22.26■■□□□ 1.15
TGFB3-204ENST00000556285 NEO1Q92859 1461 aa22.25■■□□□ 1.15
TGFB3-204ENST00000556285 TTC37Q6PGP7 1564 aa22.25■■□□□ 1.15
TGFB3-204ENST00000556285 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.24■■□□□ 1.15
TGFB3-204ENST00000556285 HNRNPUL2Q1KMD3 747 aaKnown RBP22.24■■□□□ 1.15
TGFB3-204ENST00000556285 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.22■■□□□ 1.15
TGFB3-204ENST00000556285 MADDQ8WXG6 1647 aa22.22■■□□□ 1.15
TGFB3-204ENST00000556285 EHMT2Q96KQ7 1210 aa22.22■■□□□ 1.15
TGFB3-204ENST00000556285 CDK13Q14004 1512 aaKnown RBP22.21■■□□□ 1.15
TGFB3-204ENST00000556285 PTPRMP28827 1452 aa22.19■■□□□ 1.14
TGFB3-204ENST00000556285 EFCAB5A4FU69 1503 aa22.18■■□□□ 1.14
TGFB3-204ENST00000556285 PHLDB1Q86UU1 1377 aa22.18■■□□□ 1.14
TGFB3-204ENST00000556285 ARHGEF40Q8TER5 1519 aa22.17■■□□□ 1.14
TGFB3-204ENST00000556285 RIMS1Q86UR5 1692 aaKnown RBP22.15■■□□□ 1.14
TGFB3-204ENST00000556285 LRRIQ1Q96JM4 1722 aa22.14■■□□□ 1.13
TGFB3-204ENST00000556285 FANCAO15360 1455 aa22.12■■□□□ 1.13
TGFB3-204ENST00000556285 AKNAQ7Z591 1439 aa22.12■■□□□ 1.13
TGFB3-204ENST00000556285 CFAP74Q9C0B2 1584 aa22.12■■□□□ 1.13
TGFB3-204ENST00000556285 PLEKHD1A6NEE1 506 aa22.1■■□□□ 1.13
TGFB3-204ENST00000556285 DENND4BO75064 1496 aaPredicted RBP22.09■■□□□ 1.13
TGFB3-204ENST00000556285 UBTFP17480 764 aaKnown RBP22.09■■□□□ 1.13
TGFB3-204ENST00000556285 ZMYM4Q5VZL5 1548 aa22.08■■□□□ 1.13
TGFB3-204ENST00000556285 YEATS2Q9ULM3 1422 aa22.07■■□□□ 1.12
TGFB3-204ENST00000556285 KIF14Q15058 1648 aa22.06■■□□□ 1.12
TGFB3-204ENST00000556285 HECW1Q76N89 1606 aa22.06■■□□□ 1.12
TGFB3-204ENST00000556285 ARHGAP35Q9NRY4 1499 aa22.06■■□□□ 1.12
TGFB3-204ENST00000556285 LMTK3Q96Q04 1460 aa22.03■■□□□ 1.12
TGFB3-204ENST00000556285 MYO5CQ9NQX4 1742 aa22.03■■□□□ 1.12
TGFB3-204ENST00000556285 PCF11O94913 1555 aaKnown RBP22.03■■□□□ 1.12
TGFB3-204ENST00000556285 ARID4BQ4LE39 1312 aaPredicted RBP22.03■■□□□ 1.12
TGFB3-204ENST00000556285 ZFYVE16Q7Z3T8 1539 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms