RNA–Protein interactions for RNA: ENST00000556226.5

HNRNPC-224, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-224ENST00000556226 AEBP2Q6ZN18 517 aaPredicted RBP17.16■□□□□ 0.34
HNRNPC-224ENST00000556226 ADCY10Q96PN6 1610 aa17.1■□□□□ 0.33
HNRNPC-224ENST00000556226 IGF1RP08069 1367 aa17.1■□□□□ 0.33
HNRNPC-224ENST00000556226 KIAA0586Q9BVV6 1533 aa17.08■□□□□ 0.32
HNRNPC-224ENST00000556226 MAPKBP1O60336 1514 aa17.07■□□□□ 0.32
HNRNPC-224ENST00000556226 ABCC10Q5T3U5 1492 aa17.07■□□□□ 0.32
HNRNPC-224ENST00000556226 KIF27Q86VH2 1401 aa17.07■□□□□ 0.32
HNRNPC-224ENST00000556226 CUL7Q14999 1698 aa17.06■□□□□ 0.32
HNRNPC-224ENST00000556226 DIP2BQ9P265 1576 aa17.06■□□□□ 0.32
HNRNPC-224ENST00000556226 FAM69CQ0P6D2 419 aa17.04■□□□□ 0.32
HNRNPC-224ENST00000556226 NPM1P06748 294 aaKnown RBP eCLIP16.99■□□□□ 0.31
HNRNPC-224ENST00000556226 CARMIL1Q5VZK9 1371 aa16.97■□□□□ 0.31
HNRNPC-224ENST00000556226 PTPRGP23470 1445 aa16.94■□□□□ 0.3
HNRNPC-224ENST00000556226 TSPOAP1O95153 1857 aa16.93■□□□□ 0.3
HNRNPC-224ENST00000556226 TTBK1Q5TCY1 1321 aaPredicted RBP16.92■□□□□ 0.3
HNRNPC-224ENST00000556226 IQGAP2Q13576 1575 aa16.91■□□□□ 0.3
HNRNPC-224ENST00000556226 KDM6BO15054 1643 aa16.91■□□□□ 0.3
HNRNPC-224ENST00000556226 TNIKQ9UKE5 1360 aa16.89■□□□□ 0.3
HNRNPC-224ENST00000556226 ABCC2Q92887 1545 aa16.89■□□□□ 0.29
HNRNPC-224ENST00000556226 CARMIL2Q6F5E8 1435 aa16.87■□□□□ 0.29
HNRNPC-224ENST00000556226 DISP1Q96F81 1524 aa16.87■□□□□ 0.29
HNRNPC-224ENST00000556226 ASXL2Q76L83 1435 aa16.85■□□□□ 0.29
HNRNPC-224ENST00000556226 UHRF1BP1LA0JNW5 1464 aa16.84■□□□□ 0.29
HNRNPC-224ENST00000556226 PPRC1Q5VV67 1664 aaKnown RBP16.84■□□□□ 0.29
HNRNPC-224ENST00000556226 KDM4FA0A1W2PPD8 638 aa16.82■□□□□ 0.28
HNRNPC-224ENST00000556226 UACAQ9BZF9 1416 aa16.81■□□□□ 0.28
HNRNPC-224ENST00000556226 GLI2P10070 1586 aa16.81■□□□□ 0.28
HNRNPC-224ENST00000556226 UGGT2Q9NYU1 1516 aa16.8■□□□□ 0.28
HNRNPC-224ENST00000556226 PLB1Q6P1J6 1458 aa16.8■□□□□ 0.28
HNRNPC-224ENST00000556226 RAPGEF2Q9Y4G8 1499 aa16.8■□□□□ 0.28
HNRNPC-224ENST00000556226 KIAA0556O60303 1618 aa16.78■□□□□ 0.28
HNRNPC-224ENST00000556226 KDM5BQ9UGL1 1544 aa16.77■□□□□ 0.28
HNRNPC-224ENST00000556226 ZCCHC11Q5TAX3 1644 aaKnown RBP16.75■□□□□ 0.27
HNRNPC-224ENST00000556226 EPRSP07814 1512 aaKnown RBP16.75■□□□□ 0.27
HNRNPC-224ENST00000556226 MAP3K4Q9Y6R4 1608 aa16.74■□□□□ 0.27
HNRNPC-224ENST00000556226 COL17A1Q9UMD9 1497 aaPredicted RBP16.73■□□□□ 0.27
HNRNPC-224ENST00000556226 CTTNBP2Q8WZ74 1663 aa16.69■□□□□ 0.26
HNRNPC-224ENST00000556226 ADGRL1O94910 1474 aa16.66■□□□□ 0.26
HNRNPC-224ENST00000556226 WDR7Q9Y4E6 1490 aa16.66■□□□□ 0.26
HNRNPC-224ENST00000556226 TEX14Q8IWB6 1497 aa16.64■□□□□ 0.25
HNRNPC-224ENST00000556226 ABCA8O94911 1581 aa16.64■□□□□ 0.25
HNRNPC-224ENST00000556226 PRXQ9BXM0 1461 aa16.63■□□□□ 0.25
HNRNPC-224ENST00000556226 GOLGA3Q08378 1498 aa16.61■□□□□ 0.25
HNRNPC-224ENST00000556226 CFAP43Q8NDM7 1665 aa16.56■□□□□ 0.24
HNRNPC-224ENST00000556226 MAGI3Q5TCQ9 1506 aa16.55■□□□□ 0.24
HNRNPC-224ENST00000556226 CD109Q6YHK3 1445 aa16.55■□□□□ 0.24
HNRNPC-224ENST00000556226 KCNH8Q96L42 1107 aa16.54■□□□□ 0.24
HNRNPC-224ENST00000556226 ARID3CA6NKF2 412 aa16.5■□□□□ 0.23
HNRNPC-224ENST00000556226 P3H3Q8IVL6 736 aa16.49■□□□□ 0.23
HNRNPC-224ENST00000556226 ATP10BO94823 1461 aa16.48■□□□□ 0.23
HNRNPC-224ENST00000556226 HECW2Q9P2P5 1572 aa16.48■□□□□ 0.23
HNRNPC-224ENST00000556226 SAMD9Q5K651 1589 aa16.47■□□□□ 0.23
HNRNPC-224ENST00000556226 CSRNP3Q8WYN3 585 aa16.46■□□□□ 0.23
HNRNPC-224ENST00000556226 KIF21BO75037 1637 aa16.45■□□□□ 0.22
HNRNPC-224ENST00000556226 ILDR1Q86SU0 546 aaPredicted RBP16.43■□□□□ 0.22
HNRNPC-224ENST00000556226 ARAP3Q8WWN8 1544 aa16.43■□□□□ 0.22
HNRNPC-224ENST00000556226 ABCA9Q8IUA7 1624 aa16.42■□□□□ 0.22
HNRNPC-224ENST00000556226 EEA1Q15075 1411 aa16.41■□□□□ 0.22
HNRNPC-224ENST00000556226 RAPGEF6Q8TEU7 1601 aa16.41■□□□□ 0.22
HNRNPC-224ENST00000556226 NUP153P49790 1475 aaKnown RBP16.38■□□□□ 0.21
HNRNPC-224ENST00000556226 FRMPD1Q5SYB0 1578 aa16.35■□□□□ 0.21
HNRNPC-224ENST00000556226 FAM9AQ8IZU1 332 aaPredicted RBP16.35■□□□□ 0.21
HNRNPC-224ENST00000556226 FHOD3Q2V2M9 1422 aa16.35■□□□□ 0.21
HNRNPC-224ENST00000556226 RAPGEF3O95398 923 aa16.34■□□□□ 0.21
HNRNPC-224ENST00000556226 RANGAP1P46060 587 aaPredicted RBP16.33■□□□□ 0.2
HNRNPC-224ENST00000556226 NEO1Q92859 1461 aa16.33■□□□□ 0.2
HNRNPC-224ENST00000556226 PHLDB1Q86UU1 1377 aa16.32■□□□□ 0.2
HNRNPC-224ENST00000556226 ADAMTSL3P82987 1691 aa16.31■□□□□ 0.2
HNRNPC-224ENST00000556226 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.3■□□□□ 0.2
HNRNPC-224ENST00000556226 HNRNPUL2Q1KMD3 747 aaKnown RBP16.3■□□□□ 0.2
HNRNPC-224ENST00000556226 PTPRMP28827 1452 aa16.29■□□□□ 0.2
HNRNPC-224ENST00000556226 CHIC1Q5VXU3 224 aa16.28■□□□□ 0.2
HNRNPC-224ENST00000556226 BCORL1Q5H9F3 1711 aa16.26■□□□□ 0.19
HNRNPC-224ENST00000556226 TTC37Q6PGP7 1564 aa16.25■□□□□ 0.19
HNRNPC-224ENST00000556226 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.24■□□□□ 0.191e-13■■■□□ 15.2
HNRNPC-224ENST00000556226 ARHGEF40Q8TER5 1519 aa16.24■□□□□ 0.19
HNRNPC-224ENST00000556226 MADDQ8WXG6 1647 aa16.24■□□□□ 0.19
HNRNPC-224ENST00000556226 RICTORQ6R327 1708 aa16.24■□□□□ 0.19
HNRNPC-224ENST00000556226 EFCAB5A4FU69 1503 aa16.24■□□□□ 0.19
HNRNPC-224ENST00000556226 CDK13Q14004 1512 aaKnown RBP16.22■□□□□ 0.19
HNRNPC-224ENST00000556226 DENND4BO75064 1496 aaPredicted RBP16.22■□□□□ 0.19
HNRNPC-224ENST00000556226 AKNAQ7Z591 1439 aa16.21■□□□□ 0.19
HNRNPC-224ENST00000556226 PLEKHD1A6NEE1 506 aa16.21■□□□□ 0.19
HNRNPC-224ENST00000556226 FANCAO15360 1455 aa16.21■□□□□ 0.19
HNRNPC-224ENST00000556226 SIGLEC1Q9BZZ2 1709 aa16.19■□□□□ 0.18
HNRNPC-224ENST00000556226 ARID4BQ4LE39 1312 aaPredicted RBP16.19■□□□□ 0.18
HNRNPC-224ENST00000556226 CFAP74Q9C0B2 1584 aa16.18■□□□□ 0.18
HNRNPC-224ENST00000556226 ZMYM4Q5VZL5 1548 aa16.18■□□□□ 0.18
HNRNPC-224ENST00000556226 YEATS2Q9ULM3 1422 aa16.17■□□□□ 0.18
HNRNPC-224ENST00000556226 RIMS1Q86UR5 1692 aaKnown RBP16.17■□□□□ 0.18
HNRNPC-224ENST00000556226 PCF11O94913 1555 aaKnown RBP16.17■□□□□ 0.18
HNRNPC-224ENST00000556226 LMTK3Q96Q04 1460 aa16.16■□□□□ 0.18
HNRNPC-224ENST00000556226 ZFYVE16Q7Z3T8 1539 aa16.14■□□□□ 0.17
HNRNPC-224ENST00000556226 UBTFP17480 764 aaKnown RBP16.13■□□□□ 0.17
HNRNPC-224ENST00000556226 EHMT2Q96KQ7 1210 aa16.13■□□□□ 0.17
HNRNPC-224ENST00000556226 HECW1Q76N89 1606 aa16.12■□□□□ 0.17
HNRNPC-224ENST00000556226 ARHGAP35Q9NRY4 1499 aa16.11■□□□□ 0.17
HNRNPC-224ENST00000556226 PLCH2O75038 1416 aa16.11■□□□□ 0.17
HNRNPC-224ENST00000556226 POGZQ7Z3K3 1410 aa16.11■□□□□ 0.17
HNRNPC-224ENST00000556226 SCAPERQ9BY12 1400 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms