RNA–Protein interactions for RNA: ENST00000556166.2

GABRB3-210, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-210ENST00000556166 KIAA0586Q9BVV6 1533 aa18.8■□□□□ 0.6
GABRB3-210ENST00000556166 DNAJC5Q9H3Z4 198 aa18.8■□□□□ 0.6
GABRB3-210ENST00000556166 JPH4Q96JJ6 628 aa18.78■□□□□ 0.6
GABRB3-210ENST00000556166 GOLGA3Q08378 1498 aa18.77■□□□□ 0.6
GABRB3-210ENST00000556166 UBTFP17480 764 aaKnown RBP18.77■□□□□ 0.6
GABRB3-210ENST00000556166 IQGAP2Q13576 1575 aa18.68■□□□□ 0.58
GABRB3-210ENST00000556166 PRG4Q92954 1404 aaPredicted RBP18.67■□□□□ 0.58
GABRB3-210ENST00000556166 RANGAP1P46060 587 aaPredicted RBP18.67■□□□□ 0.58
GABRB3-210ENST00000556166 SHROOM2Q13796 1616 aa18.67■□□□□ 0.58
GABRB3-210ENST00000556166 TNIKQ9UKE5 1360 aa18.65■□□□□ 0.58
GABRB3-210ENST00000556166 ERCC6L2Q5T890 1561 aa18.65■□□□□ 0.58
GABRB3-210ENST00000556166 UGGT2Q9NYU1 1516 aa18.63■□□□□ 0.57
GABRB3-210ENST00000556166 CTTNBP2Q8WZ74 1663 aa18.63■□□□□ 0.57
GABRB3-210ENST00000556166 ARHGEF11O15085 1522 aa18.63■□□□□ 0.57
GABRB3-210ENST00000556166 DISP1Q96F81 1524 aa18.61■□□□□ 0.57
GABRB3-210ENST00000556166 P3H3Q8IVL6 736 aa18.59■□□□□ 0.57
GABRB3-210ENST00000556166 RIMBP3CA6NJZ7 1639 aa18.57■□□□□ 0.56
GABRB3-210ENST00000556166 RIMBP3BA6NNM3 1639 aa18.57■□□□□ 0.56
GABRB3-210ENST00000556166 RIMBP3Q9UFD9 1639 aa18.57■□□□□ 0.56
GABRB3-210ENST00000556166 CARMIL2Q6F5E8 1435 aa18.55■□□□□ 0.56
GABRB3-210ENST00000556166 ARAP1Q96P48 1450 aa18.53■□□□□ 0.56
GABRB3-210ENST00000556166 CYB5RLQ6IPT4 315 aa18.52■□□□□ 0.56
GABRB3-210ENST00000556166 TTBK1Q5TCY1 1321 aaPredicted RBP18.52■□□□□ 0.55
GABRB3-210ENST00000556166 KIAA0556O60303 1618 aa18.51■□□□□ 0.55
GABRB3-210ENST00000556166 ARHGAP35Q9NRY4 1499 aa18.5■□□□□ 0.55
GABRB3-210ENST00000556166 SAMD9Q5K651 1589 aa18.5■□□□□ 0.55
GABRB3-210ENST00000556166 PTPRGP23470 1445 aa18.5■□□□□ 0.55
GABRB3-210ENST00000556166 CLIP1P30622 1438 aa18.48■□□□□ 0.55
GABRB3-210ENST00000556166 CEP162Q5TB80 1403 aa18.48■□□□□ 0.55
GABRB3-210ENST00000556166 FHOD3Q2V2M9 1422 aa18.48■□□□□ 0.55
GABRB3-210ENST00000556166 EFCAB5A4FU69 1503 aa18.45■□□□□ 0.54
GABRB3-210ENST00000556166 PLB1Q6P1J6 1458 aa18.38■□□□□ 0.53
GABRB3-210ENST00000556166 UACAQ9BZF9 1416 aa18.37■□□□□ 0.53
GABRB3-210ENST00000556166 ABCA8O94911 1581 aa18.32■□□□□ 0.52
GABRB3-210ENST00000556166 FMN1Q68DA7 1419 aa18.31■□□□□ 0.52
GABRB3-210ENST00000556166 UHRF1BP1LA0JNW5 1464 aa18.31■□□□□ 0.52
GABRB3-210ENST00000556166 ADCY10Q96PN6 1610 aa18.3■□□□□ 0.52
GABRB3-210ENST00000556166 ARID3CA6NKF2 412 aa18.3■□□□□ 0.52
GABRB3-210ENST00000556166 ABCC2Q92887 1545 aa18.28■□□□□ 0.52
GABRB3-210ENST00000556166 NUP153P49790 1475 aaKnown RBP18.26■□□□□ 0.51
GABRB3-210ENST00000556166 ATP1B4Q9UN42 357 aaPredicted RBP18.25■□□□□ 0.51
GABRB3-210ENST00000556166 CASKIN1Q8WXD9 1431 aa18.25■□□□□ 0.51
GABRB3-210ENST00000556166 ATP10BO94823 1461 aa18.24■□□□□ 0.51
GABRB3-210ENST00000556166 RAPGEF6Q8TEU7 1601 aa18.24■□□□□ 0.51
GABRB3-210ENST00000556166 KDM5BQ9UGL1 1544 aa18.23■□□□□ 0.51
GABRB3-210ENST00000556166 VPS8Q8N3P4 1428 aa18.22■□□□□ 0.51
GABRB3-210ENST00000556166 NPM1P06748 294 aaKnown RBP eCLIP18.22■□□□□ 0.51
GABRB3-210ENST00000556166 PCF11O94913 1555 aaKnown RBP18.19■□□□□ 0.5
GABRB3-210ENST00000556166 FYCO1Q9BQS8 1478 aa18.17■□□□□ 0.5
GABRB3-210ENST00000556166 EPRSP07814 1512 aaKnown RBP18.16■□□□□ 0.5
GABRB3-210ENST00000556166 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.16■□□□□ 0.5
GABRB3-210ENST00000556166 HNRNPUL2Q1KMD3 747 aaKnown RBP18.16■□□□□ 0.5
GABRB3-210ENST00000556166 CDK13Q14004 1512 aaKnown RBP18.15■□□□□ 0.5
GABRB3-210ENST00000556166 ZCCHC11Q5TAX3 1644 aaKnown RBP18.14■□□□□ 0.49
GABRB3-210ENST00000556166 HECW1Q76N89 1606 aa18.13■□□□□ 0.49
GABRB3-210ENST00000556166 ASXL2Q76L83 1435 aa18.13■□□□□ 0.49
GABRB3-210ENST00000556166 LRRIQ1Q96JM4 1722 aa18.09■□□□□ 0.49
GABRB3-210ENST00000556166 PLEKHD1A6NEE1 506 aa18.09■□□□□ 0.49
GABRB3-210ENST00000556166 MAPKBP1O60336 1514 aa18.09■□□□□ 0.49
GABRB3-210ENST00000556166 KCNH8Q96L42 1107 aa18.08■□□□□ 0.48
GABRB3-210ENST00000556166 CCDC18Q5T9S5 1454 aa18.07■□□□□ 0.48
GABRB3-210ENST00000556166 WDR7Q9Y4E6 1490 aa18.05■□□□□ 0.48
GABRB3-210ENST00000556166 KANK4Q5T7N3 995 aaPredicted RBP18.05■□□□□ 0.48
GABRB3-210ENST00000556166 CDK11AQ9UQ88 783 aaPredicted RBP18.04■□□□□ 0.48
GABRB3-210ENST00000556166 MAGI3Q5TCQ9 1506 aa18.04■□□□□ 0.48
GABRB3-210ENST00000556166 FAM69CQ0P6D2 419 aa18.02■□□□□ 0.48
GABRB3-210ENST00000556166 ABCC10Q5T3U5 1492 aa18.01■□□□□ 0.47
GABRB3-210ENST00000556166 TROQ12816 1431 aaPredicted RBP18.01■□□□□ 0.47
GABRB3-210ENST00000556166 MAP3K1Q13233 1512 aa18■□□□□ 0.47
GABRB3-210ENST00000556166 TRHP20396 242 aaPredicted RBP18■□□□□ 0.47
GABRB3-210ENST00000556166 TIAM1Q13009 1591 aa18■□□□□ 0.47
GABRB3-210ENST00000556166 APLP2Q06481 763 aa17.99■□□□□ 0.47
GABRB3-210ENST00000556166 MTUS2Q5JR59 1369 aa17.97■□□□□ 0.47
GABRB3-210ENST00000556166 LRRC9Q6ZRR7 1453 aa17.96■□□□□ 0.47
GABRB3-210ENST00000556166 PPARGC1BQ86YN6 1023 aaKnown RBP17.96■□□□□ 0.46
GABRB3-210ENST00000556166 DIP2BQ9P265 1576 aa17.95■□□□□ 0.46
GABRB3-210ENST00000556166 CFAP43Q8NDM7 1665 aa17.94■□□□□ 0.46
GABRB3-210ENST00000556166 GLI2P10070 1586 aa17.92■□□□□ 0.46
GABRB3-210ENST00000556166 KIF14Q15058 1648 aa17.91■□□□□ 0.46
GABRB3-210ENST00000556166 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.91■□□□□ 0.46
GABRB3-210ENST00000556166 CD109Q6YHK3 1445 aa17.88■□□□□ 0.45
GABRB3-210ENST00000556166 KIF13AQ9H1H9 1805 aa17.88■□□□□ 0.45
GABRB3-210ENST00000556166 EHBP1L1Q8N3D4 1523 aa17.88■□□□□ 0.45
GABRB3-210ENST00000556166 ABCA9Q8IUA7 1624 aa17.86■□□□□ 0.45
GABRB3-210ENST00000556166 NCOA2Q15596 1464 aa17.86■□□□□ 0.45
GABRB3-210ENST00000556166 TTC37Q6PGP7 1564 aa17.86■□□□□ 0.45
GABRB3-210ENST00000556166 MAP3K4Q9Y6R4 1608 aa17.84■□□□□ 0.45
GABRB3-210ENST00000556166 PLCH2O75038 1416 aa17.83■□□□□ 0.45
GABRB3-210ENST00000556166 GPATCH8Q9UKJ3 1502 aaKnown RBP17.83■□□□□ 0.44
GABRB3-210ENST00000556166 CCNB3Q8WWL7 1395 aa17.82■□□□□ 0.44
GABRB3-210ENST00000556166 PHLDB1Q86UU1 1377 aa17.81■□□□□ 0.44
GABRB3-210ENST00000556166 SUPT6HQ7KZ85 1726 aaKnown RBP17.78■□□□□ 0.44
GABRB3-210ENST00000556166 PPRC1Q5VV67 1664 aaKnown RBP17.78■□□□□ 0.44
GABRB3-210ENST00000556166 CFDP1Q9UEE9 299 aaPredicted RBP17.78■□□□□ 0.44
GABRB3-210ENST00000556166 EFCAB2Q5VUJ9 269 aa17.77■□□□□ 0.44
GABRB3-210ENST00000556166 ZNF644Q9H582 1327 aaPredicted RBP17.76■□□□□ 0.43
GABRB3-210ENST00000556166 TSPOAP1O95153 1857 aa17.75■□□□□ 0.43
GABRB3-210ENST00000556166 FANCAO15360 1455 aa17.74■□□□□ 0.43
GABRB3-210ENST00000556166 ZNF777Q9ULD5 760 aaPredicted RBP17.74■□□□□ 0.43
GABRB3-210ENST00000556166 MYOM3Q5VTT5 1437 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms