RNA–Protein interactions for RNA: ENST00000556098.1

CHGA-205, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-205ENST00000556098 RUSC2Q8N2Y8 1516 aa19.25■□□□□ 0.67
CHGA-205ENST00000556098 NPM1P06748 294 aaKnown RBP eCLIP19.2■□□□□ 0.66
CHGA-205ENST00000556098 KDM6BO15054 1643 aa19.19■□□□□ 0.66
CHGA-205ENST00000556098 ADCY10Q96PN6 1610 aa19.19■□□□□ 0.66
CHGA-205ENST00000556098 FAM69CQ0P6D2 419 aa19.19■□□□□ 0.66
CHGA-205ENST00000556098 DIP2BQ9P265 1576 aa19.19■□□□□ 0.66
CHGA-205ENST00000556098 JPH4Q96JJ6 628 aa19.18■□□□□ 0.66
CHGA-205ENST00000556098 TTBK1Q5TCY1 1321 aaPredicted RBP19.13■□□□□ 0.65
CHGA-205ENST00000556098 ABCC10Q5T3U5 1492 aa19.13■□□□□ 0.65
CHGA-205ENST00000556098 MAPKBP1O60336 1514 aa19.12■□□□□ 0.65
CHGA-205ENST00000556098 CUL7Q14999 1698 aa19.07■□□□□ 0.64
CHGA-205ENST00000556098 KIAA0586Q9BVV6 1533 aa18.98■□□□□ 0.63
CHGA-205ENST00000556098 KDM4FA0A1W2PPD8 638 aa18.97■□□□□ 0.63
CHGA-205ENST00000556098 PPRC1Q5VV67 1664 aaKnown RBP18.95■□□□□ 0.62
CHGA-205ENST00000556098 KIF27Q86VH2 1401 aa18.92■□□□□ 0.62
CHGA-205ENST00000556098 PTPRGP23470 1445 aa18.91■□□□□ 0.62
CHGA-205ENST00000556098 IQGAP2Q13576 1575 aa18.89■□□□□ 0.61
CHGA-205ENST00000556098 IGF1RP08069 1367 aa18.87■□□□□ 0.61
CHGA-205ENST00000556098 CARMIL2Q6F5E8 1435 aa18.86■□□□□ 0.61
CHGA-205ENST00000556098 ASXL2Q76L83 1435 aa18.85■□□□□ 0.61
CHGA-205ENST00000556098 ABCC2Q92887 1545 aa18.84■□□□□ 0.61
CHGA-205ENST00000556098 ADGRL1O94910 1474 aa18.84■□□□□ 0.61
CHGA-205ENST00000556098 TNIKQ9UKE5 1360 aa18.83■□□□□ 0.61
CHGA-205ENST00000556098 ZCCHC11Q5TAX3 1644 aaKnown RBP18.83■□□□□ 0.61
CHGA-205ENST00000556098 ILDR1Q86SU0 546 aaPredicted RBP18.82■□□□□ 0.6
CHGA-205ENST00000556098 CARMIL1Q5VZK9 1371 aa18.81■□□□□ 0.6
CHGA-205ENST00000556098 MAP3K4Q9Y6R4 1608 aa18.81■□□□□ 0.6
CHGA-205ENST00000556098 GLI2P10070 1586 aa18.81■□□□□ 0.6
CHGA-205ENST00000556098 PLB1Q6P1J6 1458 aa18.8■□□□□ 0.6
CHGA-205ENST00000556098 HECW2Q9P2P5 1572 aa18.75■□□□□ 0.59
CHGA-205ENST00000556098 CTTNBP2Q8WZ74 1663 aa18.75■□□□□ 0.59
CHGA-205ENST00000556098 UACAQ9BZF9 1416 aa18.74■□□□□ 0.59
CHGA-205ENST00000556098 UHRF1BP1LA0JNW5 1464 aa18.72■□□□□ 0.59
CHGA-205ENST00000556098 KIAA0556O60303 1618 aa18.72■□□□□ 0.59
CHGA-205ENST00000556098 EPRSP07814 1512 aaKnown RBP18.72■□□□□ 0.59
CHGA-205ENST00000556098 DISP1Q96F81 1524 aa18.72■□□□□ 0.59
CHGA-205ENST00000556098 TEX14Q8IWB6 1497 aa18.71■□□□□ 0.59
CHGA-205ENST00000556098 COL17A1Q9UMD9 1497 aaPredicted RBP18.68■□□□□ 0.58
CHGA-205ENST00000556098 KDM5BQ9UGL1 1544 aa18.66■□□□□ 0.58
CHGA-205ENST00000556098 KIF21BO75037 1637 aa18.66■□□□□ 0.58
CHGA-205ENST00000556098 CFAP43Q8NDM7 1665 aa18.65■□□□□ 0.58
CHGA-205ENST00000556098 RAPGEF2Q9Y4G8 1499 aa18.64■□□□□ 0.57
CHGA-205ENST00000556098 UGGT2Q9NYU1 1516 aa18.64■□□□□ 0.57
CHGA-205ENST00000556098 WDR7Q9Y4E6 1490 aa18.61■□□□□ 0.57
CHGA-205ENST00000556098 KCNH8Q96L42 1107 aa18.59■□□□□ 0.57
CHGA-205ENST00000556098 ARID3CA6NKF2 412 aa18.53■□□□□ 0.56
CHGA-205ENST00000556098 CD109Q6YHK3 1445 aa18.53■□□□□ 0.56
CHGA-205ENST00000556098 ABCA8O94911 1581 aa18.51■□□□□ 0.55
CHGA-205ENST00000556098 GOLGA3Q08378 1498 aa18.49■□□□□ 0.55
CHGA-205ENST00000556098 MAGI3Q5TCQ9 1506 aa18.48■□□□□ 0.55
CHGA-205ENST00000556098 P3H3Q8IVL6 736 aa18.43■□□□□ 0.54
CHGA-205ENST00000556098 CHIC1Q5VXU3 224 aa18.42■□□□□ 0.54
CHGA-205ENST00000556098 ADAMTSL3P82987 1691 aa18.38■□□□□ 0.53
CHGA-205ENST00000556098 FAM9AQ8IZU1 332 aaPredicted RBP18.37■□□□□ 0.53
CHGA-205ENST00000556098 ABCA9Q8IUA7 1624 aa18.37■□□□□ 0.53
CHGA-205ENST00000556098 MADDQ8WXG6 1647 aa18.37■□□□□ 0.53
CHGA-205ENST00000556098 RIMS1Q86UR5 1692 aaKnown RBP18.37■□□□□ 0.53
CHGA-205ENST00000556098 BCORL1Q5H9F3 1711 aa18.36■□□□□ 0.53
CHGA-205ENST00000556098 RAPGEF6Q8TEU7 1601 aa18.35■□□□□ 0.53
CHGA-205ENST00000556098 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.35■□□□□ 0.53
CHGA-205ENST00000556098 HNRNPUL2Q1KMD3 747 aaKnown RBP18.35■□□□□ 0.53
CHGA-205ENST00000556098 ARAP3Q8WWN8 1544 aa18.33■□□□□ 0.53
CHGA-205ENST00000556098 ARID4BQ4LE39 1312 aaPredicted RBP18.33■□□□□ 0.53
CHGA-205ENST00000556098 PLPPR3Q6T4P5 718 aa18.33■□□□□ 0.52
CHGA-205ENST00000556098 PTPRMP28827 1452 aa18.33■□□□□ 0.52
CHGA-205ENST00000556098 RANGAP1P46060 587 aaPredicted RBP18.32■□□□□ 0.52
CHGA-205ENST00000556098 ATP10BO94823 1461 aa18.31■□□□□ 0.52
CHGA-205ENST00000556098 FRMPD1Q5SYB0 1578 aa18.3■□□□□ 0.52
CHGA-205ENST00000556098 RAPGEF3O95398 923 aa18.29■□□□□ 0.52
CHGA-205ENST00000556098 FBXO41Q8TF61 875 aa18.29■□□□□ 0.52
CHGA-205ENST00000556098 PRXQ9BXM0 1461 aa18.26■□□□□ 0.51
CHGA-205ENST00000556098 SAMD9Q5K651 1589 aa18.26■□□□□ 0.51
CHGA-205ENST00000556098 RICTORQ6R327 1708 aa18.26■□□□□ 0.51
CHGA-205ENST00000556098 PCF11O94913 1555 aaKnown RBP18.25■□□□□ 0.51
CHGA-205ENST00000556098 FER1L4A9Z1Z3 1794 aa18.22■□□□□ 0.51
CHGA-205ENST00000556098 CFAP74Q9C0B2 1584 aa18.22■□□□□ 0.51
CHGA-205ENST00000556098 NEO1Q92859 1461 aa18.22■□□□□ 0.51
CHGA-205ENST00000556098 ARHGEF40Q8TER5 1519 aa18.22■□□□□ 0.51
CHGA-205ENST00000556098 PHLDB1Q86UU1 1377 aa18.18■□□□□ 0.5
CHGA-205ENST00000556098 LMTK3Q96Q04 1460 aa18.18■□□□□ 0.5
CHGA-205ENST00000556098 SIGLEC1Q9BZZ2 1709 aa18.18■□□□□ 0.5
CHGA-205ENST00000556098 FHOD3Q2V2M9 1422 aa18.15■□□□□ 0.5
CHGA-205ENST00000556098 TTC37Q6PGP7 1564 aa18.15■□□□□ 0.5
CHGA-205ENST00000556098 NUP153P49790 1475 aaKnown RBP18.14■□□□□ 0.5
CHGA-205ENST00000556098 HSPA2P54652 639 aa18.14■□□□□ 0.49
CHGA-205ENST00000556098 DENND4BO75064 1496 aaPredicted RBP18.14■□□□□ 0.49
CHGA-205ENST00000556098 MLECQ14165 292 aa18.13■□□□□ 0.49
CHGA-205ENST00000556098 FANCAO15360 1455 aa18.12■□□□□ 0.49
CHGA-205ENST00000556098 ZFYVE16Q7Z3T8 1539 aa18.12■□□□□ 0.49
CHGA-205ENST00000556098 EFCAB5A4FU69 1503 aa18.1■□□□□ 0.49
CHGA-205ENST00000556098 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.1■□□□□ 0.49
CHGA-205ENST00000556098 AKNAQ7Z591 1439 aa18.1■□□□□ 0.49
CHGA-205ENST00000556098 PLEKHD1A6NEE1 506 aa18.09■□□□□ 0.49
CHGA-205ENST00000556098 MYO5CQ9NQX4 1742 aa18.09■□□□□ 0.49
CHGA-205ENST00000556098 POGZQ7Z3K3 1410 aa18.08■□□□□ 0.49
CHGA-205ENST00000556098 CSRNP3Q8WYN3 585 aa18.08■□□□□ 0.48
CHGA-205ENST00000556098 HECW1Q76N89 1606 aa18.07■□□□□ 0.48
CHGA-205ENST00000556098 PREX1Q8TCU6 1659 aa18.06■□□□□ 0.48
CHGA-205ENST00000556098 CDK13Q14004 1512 aaKnown RBP18.06■□□□□ 0.48
CHGA-205ENST00000556098 ZMYM4Q5VZL5 1548 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms