RNA–Protein interactions for RNA: ENST00000556092.5

SEC23A-212, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4

Gene SEC23A, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-212ENST00000556092 IGF1RP08069 1367 aa24.54■■□□□ 1.52
SEC23A-212ENST00000556092 JPH4Q96JJ6 628 aa24.53■■□□□ 1.52
SEC23A-212ENST00000556092 KIAA0586Q9BVV6 1533 aa24.45■■□□□ 1.51
SEC23A-212ENST00000556092 CARMIL1Q5VZK9 1371 aa24.41■■□□□ 1.5
SEC23A-212ENST00000556092 KIF13AQ9H1H9 1805 aa24.4■■□□□ 1.5
SEC23A-212ENST00000556092 ADCY10Q96PN6 1610 aa24.35■■□□□ 1.49
SEC23A-212ENST00000556092 IQGAP2Q13576 1575 aa24.32■■□□□ 1.48
SEC23A-212ENST00000556092 MAPKBP1O60336 1514 aa24.26■■□□□ 1.47
SEC23A-212ENST00000556092 RAPGEF2Q9Y4G8 1499 aa24.23■■□□□ 1.47
SEC23A-212ENST00000556092 CARMIL2Q6F5E8 1435 aa24.22■■□□□ 1.47
SEC23A-212ENST00000556092 NPM1P06748 294 aaKnown RBP eCLIP24.22■■□□□ 1.47
SEC23A-212ENST00000556092 DIP2BQ9P265 1576 aa24.2■■□□□ 1.47
SEC23A-212ENST00000556092 PTPRGP23470 1445 aa24.19■■□□□ 1.46
SEC23A-212ENST00000556092 ABCC10Q5T3U5 1492 aa24.19■■□□□ 1.46
SEC23A-212ENST00000556092 CTTNBP2Q8WZ74 1663 aa24.18■■□□□ 1.46
SEC23A-212ENST00000556092 TTBK1Q5TCY1 1321 aaPredicted RBP24.17■■□□□ 1.46
SEC23A-212ENST00000556092 TNIKQ9UKE5 1360 aa24.16■■□□□ 1.46
SEC23A-212ENST00000556092 DISP1Q96F81 1524 aa24.14■■□□□ 1.45
SEC23A-212ENST00000556092 UGGT2Q9NYU1 1516 aa24.12■■□□□ 1.45
SEC23A-212ENST00000556092 FAM69CQ0P6D2 419 aa24.12■■□□□ 1.45
SEC23A-212ENST00000556092 TSPOAP1O95153 1857 aa24.11■■□□□ 1.45
SEC23A-212ENST00000556092 KIAA0556O60303 1618 aa24.11■■□□□ 1.45
SEC23A-212ENST00000556092 ABCC2Q92887 1545 aa24.08■■□□□ 1.45
SEC23A-212ENST00000556092 UHRF1BP1LA0JNW5 1464 aa24.04■■□□□ 1.44
SEC23A-212ENST00000556092 UACAQ9BZF9 1416 aa24.02■■□□□ 1.44
SEC23A-212ENST00000556092 PRXQ9BXM0 1461 aa24■■□□□ 1.43
SEC23A-212ENST00000556092 ASXL2Q76L83 1435 aa23.98■■□□□ 1.43
SEC23A-212ENST00000556092 KDM6BO15054 1643 aa23.97■■□□□ 1.43
SEC23A-212ENST00000556092 ZCCHC11Q5TAX3 1644 aaKnown RBP23.97■■□□□ 1.43
SEC23A-212ENST00000556092 PLB1Q6P1J6 1458 aa23.95■■□□□ 1.42
SEC23A-212ENST00000556092 AEBP2Q6ZN18 517 aaPredicted RBP23.94■■□□□ 1.42
SEC23A-212ENST00000556092 KDM5BQ9UGL1 1544 aa23.94■■□□□ 1.42
SEC23A-212ENST00000556092 GOLGA3Q08378 1498 aa23.94■■□□□ 1.42
SEC23A-212ENST00000556092 PPRC1Q5VV67 1664 aaKnown RBP23.92■■□□□ 1.42
SEC23A-212ENST00000556092 GLI2P10070 1586 aa23.91■■□□□ 1.42
SEC23A-212ENST00000556092 EPRSP07814 1512 aaKnown RBP23.84■■□□□ 1.41
SEC23A-212ENST00000556092 MAP3K4Q9Y6R4 1608 aa23.84■■□□□ 1.41
SEC23A-212ENST00000556092 ABCA8O94911 1581 aa23.84■■□□□ 1.41
SEC23A-212ENST00000556092 CSRNP3Q8WYN3 585 aa23.8■■□□□ 1.4
SEC23A-212ENST00000556092 WDR7Q9Y4E6 1490 aa23.79■■□□□ 1.4
SEC23A-212ENST00000556092 EEA1Q15075 1411 aa23.78■■□□□ 1.4
SEC23A-212ENST00000556092 SAMD9Q5K651 1589 aa23.75■■□□□ 1.39
SEC23A-212ENST00000556092 TEX14Q8IWB6 1497 aa23.71■■□□□ 1.39
SEC23A-212ENST00000556092 CFAP43Q8NDM7 1665 aa23.7■■□□□ 1.39
SEC23A-212ENST00000556092 P3H3Q8IVL6 736 aa23.7■■□□□ 1.38
SEC23A-212ENST00000556092 FAM9AQ8IZU1 332 aaPredicted RBP23.66■■□□□ 1.38
SEC23A-212ENST00000556092 KIF21BO75037 1637 aa23.66■■□□□ 1.38
SEC23A-212ENST00000556092 RAPGEF6Q8TEU7 1601 aa23.66■■□□□ 1.38
SEC23A-212ENST00000556092 COL17A1Q9UMD9 1497 aaPredicted RBP23.63■■□□□ 1.37
SEC23A-212ENST00000556092 ARID3CA6NKF2 412 aa23.62■■□□□ 1.37
SEC23A-212ENST00000556092 KCNH8Q96L42 1107 aa23.61■■□□□ 1.37
SEC23A-212ENST00000556092 CD109Q6YHK3 1445 aa23.59■■□□□ 1.37
SEC23A-212ENST00000556092 RANGAP1P46060 587 aaPredicted RBP23.59■■□□□ 1.37
SEC23A-212ENST00000556092 ATP10BO94823 1461 aa23.59■■□□□ 1.37
SEC23A-212ENST00000556092 MAGI3Q5TCQ9 1506 aa23.59■■□□□ 1.37
SEC23A-212ENST00000556092 FHOD3Q2V2M9 1422 aa23.56■■□□□ 1.36
SEC23A-212ENST00000556092 KDM4FA0A1W2PPD8 638 aa23.55■■□□□ 1.36
SEC23A-212ENST00000556092 EFCAB5A4FU69 1503 aa23.53■■□□□ 1.36
SEC23A-212ENST00000556092 ABCA9Q8IUA7 1624 aa23.51■■□□□ 1.35
SEC23A-212ENST00000556092 NUP153P49790 1475 aaKnown RBP23.5■■□□□ 1.35
SEC23A-212ENST00000556092 CHIC1Q5VXU3 224 aa23.48■■□□□ 1.35
SEC23A-212ENST00000556092 ADGRL1O94910 1474 aa23.48■■□□□ 1.35
SEC23A-212ENST00000556092 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.46■■□□□ 1.35
SEC23A-212ENST00000556092 HNRNPUL2Q1KMD3 747 aaKnown RBP23.46■■□□□ 1.35
SEC23A-212ENST00000556092 EHMT2Q96KQ7 1210 aa23.44■■□□□ 1.34
SEC23A-212ENST00000556092 ARAP3Q8WWN8 1544 aa23.38■■□□□ 1.33
SEC23A-212ENST00000556092 UBTFP17480 764 aaKnown RBP23.38■■□□□ 1.33
SEC23A-212ENST00000556092 CDK13Q14004 1512 aaKnown RBP23.33■■□□□ 1.33
SEC23A-212ENST00000556092 NEO1Q92859 1461 aa23.33■■□□□ 1.33
SEC23A-212ENST00000556092 PHLDB1Q86UU1 1377 aa23.31■■□□□ 1.32
SEC23A-212ENST00000556092 HECW1Q76N89 1606 aa23.31■■□□□ 1.32
SEC23A-212ENST00000556092 ARHGAP35Q9NRY4 1499 aa23.3■■□□□ 1.32
SEC23A-212ENST00000556092 PLEKHD1A6NEE1 506 aa23.3■■□□□ 1.32
SEC23A-212ENST00000556092 TTC37Q6PGP7 1564 aa23.3■■□□□ 1.32
SEC23A-212ENST00000556092 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.28■■□□□ 1.32
SEC23A-212ENST00000556092 FRMPD1Q5SYB0 1578 aa23.28■■□□□ 1.32
SEC23A-212ENST00000556092 CFAP74Q9C0B2 1584 aa23.27■■□□□ 1.32
SEC23A-212ENST00000556092 FMN1Q68DA7 1419 aa23.27■■□□□ 1.32
SEC23A-212ENST00000556092 RICTORQ6R327 1708 aa23.23■■□□□ 1.31
SEC23A-212ENST00000556092 RAPGEF3O95398 923 aa23.22■■□□□ 1.31
SEC23A-212ENST00000556092 LRRIQ1Q96JM4 1722 aa23.22■■□□□ 1.31
SEC23A-212ENST00000556092 FANCAO15360 1455 aa23.21■■□□□ 1.31
SEC23A-212ENST00000556092 ATP1B4Q9UN42 357 aaPredicted RBP23.2■■□□□ 1.3
SEC23A-212ENST00000556092 MYO5CQ9NQX4 1742 aa23.18■■□□□ 1.3
SEC23A-212ENST00000556092 AKNAQ7Z591 1439 aa23.17■■□□□ 1.3
SEC23A-212ENST00000556092 DENND4BO75064 1496 aaPredicted RBP23.17■■□□□ 1.3
SEC23A-212ENST00000556092 ARHGEF40Q8TER5 1519 aa23.16■■□□□ 1.3
SEC23A-212ENST00000556092 KIF14Q15058 1648 aa23.15■■□□□ 1.3
SEC23A-212ENST00000556092 HECW2Q9P2P5 1572 aa23.14■■□□□ 1.3
SEC23A-212ENST00000556092 ADAMTSL3P82987 1691 aa23.13■■□□□ 1.29
SEC23A-212ENST00000556092 PCF11O94913 1555 aaKnown RBP23.13■■□□□ 1.29
SEC23A-212ENST00000556092 BCORL1Q5H9F3 1711 aa23.12■■□□□ 1.29
SEC23A-212ENST00000556092 ZMYM4Q5VZL5 1548 aa23.1■■□□□ 1.29
SEC23A-212ENST00000556092 PLCH2O75038 1416 aa23.08■■□□□ 1.29
SEC23A-212ENST00000556092 CDK11AQ9UQ88 783 aaPredicted RBP23.08■■□□□ 1.29
SEC23A-212ENST00000556092 TROQ12816 1431 aaPredicted RBP23.08■■□□□ 1.28
SEC23A-212ENST00000556092 MADDQ8WXG6 1647 aa23.06■■□□□ 1.28
SEC23A-212ENST00000556092 CLIP1P30622 1438 aa23.06■■□□□ 1.28
SEC23A-212ENST00000556092 ZFYVE16Q7Z3T8 1539 aa23.05■■□□□ 1.28
SEC23A-212ENST00000556092 ARID4BQ4LE39 1312 aaPredicted RBP23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms