RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 GABBR2O75899 941 aa14.08□□□□□ -0.16
ATXN3-235ENST00000556082 NPM1P06748 294 aaKnown RBP eCLIP14.06□□□□□ -0.16
ATXN3-235ENST00000556082 SMARCA4P51532 1647 aa14.03□□□□□ -0.16
ATXN3-235ENST00000556082 WIZO95785 1651 aa13.98□□□□□ -0.17
ATXN3-235ENST00000556082 PAK3O75914 559 aaPredicted RBP13.97□□□□□ -0.17
ATXN3-235ENST00000556082 MNX1P50219 401 aaPredicted RBP13.96□□□□□ -0.17
ATXN3-235ENST00000556082 ZNF579Q8NAF0 562 aaKnown RBP13.96□□□□□ -0.17
ATXN3-235ENST00000556082 ZRANB1Q9UGI0 708 aa13.94□□□□□ -0.18
ATXN3-235ENST00000556082 PLEKHG5O94827 1062 aa13.93□□□□□ -0.18
ATXN3-235ENST00000556082 PEG3Q9GZU2 1588 aa13.92□□□□□ -0.18
ATXN3-235ENST00000556082 TOP2AP11388 1531 aaKnown RBP13.92□□□□□ -0.18
ATXN3-235ENST00000556082 FKBP8Q14318 412 aa13.87□□□□□ -0.19
ATXN3-235ENST00000556082 MIER1Q8N108 512 aa13.84□□□□□ -0.19
ATXN3-235ENST00000556082 ATAD2BQ9ULI0 1458 aa13.81□□□□□ -0.2
ATXN3-235ENST00000556082 SMARCA2P51531 1590 aa13.8□□□□□ -0.2
ATXN3-235ENST00000556082 CCDC88BA6NC98 1476 aa13.8□□□□□ -0.2
ATXN3-235ENST00000556082 DCBLD2Q96PD2 775 aa13.78□□□□□ -0.2
ATXN3-235ENST00000556082 ZBTB47Q9UFB7 747 aaPredicted RBP13.77□□□□□ -0.21
ATXN3-235ENST00000556082 PLCD3Q8N3E9 789 aa13.75□□□□□ -0.21
ATXN3-235ENST00000556082 FBXO3Q9UK99 471 aa13.74□□□□□ -0.21
ATXN3-235ENST00000556082 NCAPD3P42695 1498 aa13.72□□□□□ -0.21
ATXN3-235ENST00000556082 EIF4G1Q04637 1599 aaKnown RBP13.71□□□□□ -0.21
ATXN3-235ENST00000556082 POTEIP0CG38 1075 aa13.71□□□□□ -0.21
ATXN3-235ENST00000556082 TRIM41Q8WV44 630 aa13.71□□□□□ -0.21
ATXN3-235ENST00000556082 BAZ1BQ9UIG0 1483 aaKnown RBP13.71□□□□□ -0.21
ATXN3-235ENST00000556082 PHF12Q96QT6 1004 aa13.69□□□□□ -0.22
ATXN3-235ENST00000556082 GALR2O43603 387 aaPredicted RBP13.67□□□□□ -0.22
ATXN3-235ENST00000556082 HMGXB3Q12766 1538 aa13.65□□□□□ -0.22
ATXN3-235ENST00000556082 LHX8Q68G74 356 aa13.65□□□□□ -0.22
ATXN3-235ENST00000556082 TSPYL2Q9H2G4 693 aaPredicted RBP13.64□□□□□ -0.23
ATXN3-235ENST00000556082 CCDC61Q9Y6R9 512 aa13.63□□□□□ -0.23
ATXN3-235ENST00000556082 RASEFQ8IZ41 740 aa13.57□□□□□ -0.24
ATXN3-235ENST00000556082 KIF12Q96FN5 646 aa13.55□□□□□ -0.24
ATXN3-235ENST00000556082 MS4A3Q96HJ5 214 aa13.54□□□□□ -0.24
ATXN3-235ENST00000556082 NUBP1P53384 320 aa13.53□□□□□ -0.24
ATXN3-235ENST00000556082 ASTLQ6HA08 431 aaPredicted RBP13.51□□□□□ -0.25
ATXN3-235ENST00000556082 SGIP1Q9BQI5 828 aa13.51□□□□□ -0.25
ATXN3-235ENST00000556082 LOC105371045A0A1W2PR82 267 aa13.49□□□□□ -0.25
ATXN3-235ENST00000556082 FAM212AQ96EL1 285 aa13.48□□□□□ -0.25
ATXN3-235ENST00000556082 ABCC8Q09428 1581 aa13.45□□□□□ -0.26
ATXN3-235ENST00000556082 WRNQ14191 1432 aaPredicted RBP eCLIP13.45□□□□□ -0.26
ATXN3-235ENST00000556082 CC2D2AQ9P2K1 1620 aa13.44□□□□□ -0.26
ATXN3-235ENST00000556082 MAP3K13O43283 966 aa13.44□□□□□ -0.26
ATXN3-235ENST00000556082 ATMINO43313 823 aaPredicted RBP13.44□□□□□ -0.26
ATXN3-235ENST00000556082 CFTRP13569 1480 aa13.43□□□□□ -0.26
ATXN3-235ENST00000556082 VASPP50552 380 aaPredicted RBP13.43□□□□□ -0.26
ATXN3-235ENST00000556082 C7P10643 843 aa13.42□□□□□ -0.26
ATXN3-235ENST00000556082 SLC39A7Q92504 469 aa13.42□□□□□ -0.26
ATXN3-235ENST00000556082 EEA1Q15075 1411 aa13.4□□□□□ -0.26
ATXN3-235ENST00000556082 TIE1P35590 1138 aa13.4□□□□□ -0.26
ATXN3-235ENST00000556082 PELP1Q8IZL8 1130 aaKnown RBP13.39□□□□□ -0.27
ATXN3-235ENST00000556082 FAM9AQ8IZU1 332 aaPredicted RBP13.37□□□□□ -0.27
ATXN3-235ENST00000556082 CADPSQ9ULU8 1353 aa13.36□□□□□ -0.27
ATXN3-235ENST00000556082 KLHL34Q8N239 644 aa13.36□□□□□ -0.27
ATXN3-235ENST00000556082 PCDHB13Q9Y5F0 798 aa13.36□□□□□ -0.27
ATXN3-235ENST00000556082 DCAF8Q5TAQ9 597 aa13.35□□□□□ -0.27
ATXN3-235ENST00000556082 ATN1P54259 1190 aaPredicted RBP13.33□□□□□ -0.28
ATXN3-235ENST00000556082 METRNQ9UJH8 293 aa13.33□□□□□ -0.28
ATXN3-235ENST00000556082 SYNJ1O43426 1573 aa13.32□□□□□ -0.28
ATXN3-235ENST00000556082 BMP2KQ9NSY1 1161 aaPredicted RBP13.32□□□□□ -0.28
ATXN3-235ENST00000556082 GSE1Q14687 1217 aa13.31□□□□□ -0.28
ATXN3-235ENST00000556082 SOGA1O94964 1423 aa13.3□□□□□ -0.28
ATXN3-235ENST00000556082 TOP2BQ02880 1626 aa13.3□□□□□ -0.28
ATXN3-235ENST00000556082 TRPC6Q9Y210 931 aa13.26□□□□□ -0.29
ATXN3-235ENST00000556082 BIVM-ERCC5R4GMW8 1640 aa13.26□□□□□ -0.29
ATXN3-235ENST00000556082 TTLL13PA6NNM8 815 aa13.25□□□□□ -0.29
ATXN3-235ENST00000556082 POTEB2H3BUK9 544 aa13.25□□□□□ -0.29
ATXN3-235ENST00000556082 MAMSTRQ6ZN01 415 aa13.25□□□□□ -0.29
ATXN3-235ENST00000556082 IFNL1Q8IU54 200 aa13.25□□□□□ -0.29
ATXN3-235ENST00000556082 IER5LQ5T953 404 aa13.23□□□□□ -0.29
ATXN3-235ENST00000556082 RUSC2Q8N2Y8 1516 aa13.23□□□□□ -0.29
ATXN3-235ENST00000556082 PRDM2Q13029 1718 aa13.22□□□□□ -0.29
ATXN3-235ENST00000556082 OTUD5Q96G74 571 aa13.22□□□□□ -0.29
ATXN3-235ENST00000556082 CUX1P39880 1505 aa13.22□□□□□ -0.29
ATXN3-235ENST00000556082 CHRM1P11229 460 aaPredicted RBP13.21□□□□□ -0.29
ATXN3-235ENST00000556082 TNIKQ9UKE5 1360 aa13.2□□□□□ -0.3
ATXN3-235ENST00000556082 PYGBP11216 843 aa13.19□□□□□ -0.3
ATXN3-235ENST00000556082 SPOCK2Q92563 424 aa13.19□□□□□ -0.3
ATXN3-235ENST00000556082 IFNLR1Q8IU57 520 aaPredicted RBP13.17□□□□□ -0.3
ATXN3-235ENST00000556082 TMEM106CQ9BVX2 250 aa13.16□□□□□ -0.3
ATXN3-235ENST00000556082 TRIM35Q9UPQ4 493 aa13.16□□□□□ -0.3
ATXN3-235ENST00000556082 GOLGA3Q08378 1498 aa13.16□□□□□ -0.3
ATXN3-235ENST00000556082 FANCD2Q9BXW9 1451 aa13.16□□□□□ -0.3
ATXN3-235ENST00000556082 CEP164Q9UPV0 1460 aa13.16□□□□□ -0.3
ATXN3-235ENST00000556082 LAMC3Q9Y6N6 1575 aa13.15□□□□□ -0.3
ATXN3-235ENST00000556082 SEC24BO95487 1268 aa13.15□□□□□ -0.3
ATXN3-235ENST00000556082 ZNF467Q7Z7K2 595 aaPredicted RBP13.15□□□□□ -0.3
ATXN3-235ENST00000556082 KIF21BO75037 1637 aa13.14□□□□□ -0.31
ATXN3-235ENST00000556082 KIF27Q86VH2 1401 aa13.13□□□□□ -0.31
ATXN3-235ENST00000556082 POTEFA5A3E0 1075 aa13.11□□□□□ -0.31
ATXN3-235ENST00000556082 SCUBE2Q9NQ36 999 aa13.11□□□□□ -0.31
ATXN3-235ENST00000556082 PDS5BQ9NTI5 1447 aa13.09□□□□□ -0.31
ATXN3-235ENST00000556082 PRXQ9BXM0 1461 aa13.09□□□□□ -0.31
ATXN3-235ENST00000556082 POTEJP0CG39 1038 aa13.08□□□□□ -0.32
ATXN3-235ENST00000556082 UBTFP17480 764 aaKnown RBP13.08□□□□□ -0.32
ATXN3-235ENST00000556082 PCDHB8Q9UN66 801 aa13.08□□□□□ -0.32
ATXN3-235ENST00000556082 NESP48681 1621 aa13.08□□□□□ -0.32
ATXN3-235ENST00000556082 CEP162Q5TB80 1403 aa13.07□□□□□ -0.32
ATXN3-235ENST00000556082 TRIM26Q12899 539 aaPredicted RBP13.07□□□□□ -0.32
ATXN3-235ENST00000556082 COLQQ9Y215 455 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms