RNA–Protein interactions for RNA: ENST00000556040.1

ZFYVE1-207, Transcript of zinc finger FYVE-type containing 1, humanhuman

TSL 2

Gene ZFYVE1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE1-207ENST00000556040 PRG4Q92954 1404 aaPredicted RBP24.69■■□□□ 1.54
ZFYVE1-207ENST00000556040 JPH4Q96JJ6 628 aa24.67■■□□□ 1.54
ZFYVE1-207ENST00000556040 CARMIL1Q5VZK9 1371 aa24.64■■□□□ 1.53
ZFYVE1-207ENST00000556040 KIAA0586Q9BVV6 1533 aa24.62■■□□□ 1.53
ZFYVE1-207ENST00000556040 IQGAP2Q13576 1575 aa24.48■■□□□ 1.51
ZFYVE1-207ENST00000556040 RAPGEF2Q9Y4G8 1499 aa24.47■■□□□ 1.51
ZFYVE1-207ENST00000556040 ADCY10Q96PN6 1610 aa24.4■■□□□ 1.5
ZFYVE1-207ENST00000556040 CARMIL2Q6F5E8 1435 aa24.4■■□□□ 1.5
ZFYVE1-207ENST00000556040 CTTNBP2Q8WZ74 1663 aa24.35■■□□□ 1.49
ZFYVE1-207ENST00000556040 NPM1P06748 294 aaKnown RBP eCLIP24.35■■□□□ 1.49
ZFYVE1-207ENST00000556040 KIF13AQ9H1H9 1805 aa24.35■■□□□ 1.49
ZFYVE1-207ENST00000556040 PTPRGP23470 1445 aa24.34■■□□□ 1.49
ZFYVE1-207ENST00000556040 TTBK1Q5TCY1 1321 aaPredicted RBP24.33■■□□□ 1.48
ZFYVE1-207ENST00000556040 TNIKQ9UKE5 1360 aa24.32■■□□□ 1.48
ZFYVE1-207ENST00000556040 MAPKBP1O60336 1514 aa24.3■■□□□ 1.48
ZFYVE1-207ENST00000556040 UGGT2Q9NYU1 1516 aa24.3■■□□□ 1.48
ZFYVE1-207ENST00000556040 DISP1Q96F81 1524 aa24.29■■□□□ 1.48
ZFYVE1-207ENST00000556040 PRXQ9BXM0 1461 aa24.27■■□□□ 1.48
ZFYVE1-207ENST00000556040 KIAA0556O60303 1618 aa24.25■■□□□ 1.47
ZFYVE1-207ENST00000556040 DIP2BQ9P265 1576 aa24.21■■□□□ 1.47
ZFYVE1-207ENST00000556040 ABCC10Q5T3U5 1492 aa24.21■■□□□ 1.47
ZFYVE1-207ENST00000556040 ABCC2Q92887 1545 aa24.19■■□□□ 1.46
ZFYVE1-207ENST00000556040 FAM69CQ0P6D2 419 aa24.18■■□□□ 1.46
ZFYVE1-207ENST00000556040 UACAQ9BZF9 1416 aa24.17■■□□□ 1.46
ZFYVE1-207ENST00000556040 UHRF1BP1LA0JNW5 1464 aa24.16■■□□□ 1.46
ZFYVE1-207ENST00000556040 GOLGA3Q08378 1498 aa24.15■■□□□ 1.46
ZFYVE1-207ENST00000556040 EEA1Q15075 1411 aa24.14■■□□□ 1.45
ZFYVE1-207ENST00000556040 CSRNP3Q8WYN3 585 aa24.14■■□□□ 1.45
ZFYVE1-207ENST00000556040 TSPOAP1O95153 1857 aa24.09■■□□□ 1.45
ZFYVE1-207ENST00000556040 ASXL2Q76L83 1435 aa24.07■■□□□ 1.44
ZFYVE1-207ENST00000556040 ZCCHC11Q5TAX3 1644 aaKnown RBP24.06■■□□□ 1.44
ZFYVE1-207ENST00000556040 PLB1Q6P1J6 1458 aa24.06■■□□□ 1.44
ZFYVE1-207ENST00000556040 KDM5BQ9UGL1 1544 aa24.05■■□□□ 1.44
ZFYVE1-207ENST00000556040 FAM9AQ8IZU1 332 aaPredicted RBP24.03■■□□□ 1.44
ZFYVE1-207ENST00000556040 ABCA8O94911 1581 aa23.99■■□□□ 1.43
ZFYVE1-207ENST00000556040 GLI2P10070 1586 aa23.98■■□□□ 1.43
ZFYVE1-207ENST00000556040 KIF21BO75037 1637 aa23.95■■□□□ 1.43
ZFYVE1-207ENST00000556040 SAMD9Q5K651 1589 aa23.95■■□□□ 1.43
ZFYVE1-207ENST00000556040 CHIC1Q5VXU3 224 aa23.95■■□□□ 1.42
ZFYVE1-207ENST00000556040 KDM6BO15054 1643 aa23.95■■□□□ 1.42
ZFYVE1-207ENST00000556040 P3H3Q8IVL6 736 aa23.93■■□□□ 1.42
ZFYVE1-207ENST00000556040 EPRSP07814 1512 aaKnown RBP23.92■■□□□ 1.42
ZFYVE1-207ENST00000556040 PPRC1Q5VV67 1664 aaKnown RBP23.9■■□□□ 1.42
ZFYVE1-207ENST00000556040 WDR7Q9Y4E6 1490 aa23.89■■□□□ 1.42
ZFYVE1-207ENST00000556040 MAP3K4Q9Y6R4 1608 aa23.88■■□□□ 1.41
ZFYVE1-207ENST00000556040 RANGAP1P46060 587 aaPredicted RBP23.87■■□□□ 1.41
ZFYVE1-207ENST00000556040 RAPGEF6Q8TEU7 1601 aa23.82■■□□□ 1.4
ZFYVE1-207ENST00000556040 ARID3CA6NKF2 412 aa23.79■■□□□ 1.4
ZFYVE1-207ENST00000556040 AEBP2Q6ZN18 517 aaPredicted RBP23.79■■□□□ 1.4
ZFYVE1-207ENST00000556040 TEX14Q8IWB6 1497 aa23.79■■□□□ 1.4
ZFYVE1-207ENST00000556040 FHOD3Q2V2M9 1422 aa23.78■■□□□ 1.4
ZFYVE1-207ENST00000556040 EHMT2Q96KQ7 1210 aa23.78■■□□□ 1.4
ZFYVE1-207ENST00000556040 EFCAB5A4FU69 1503 aa23.78■■□□□ 1.4
ZFYVE1-207ENST00000556040 CFAP43Q8NDM7 1665 aa23.77■■□□□ 1.4
ZFYVE1-207ENST00000556040 KCNH8Q96L42 1107 aa23.76■■□□□ 1.39
ZFYVE1-207ENST00000556040 ATP10BO94823 1461 aa23.75■■□□□ 1.39
ZFYVE1-207ENST00000556040 UBTFP17480 764 aaKnown RBP23.73■■□□□ 1.39
ZFYVE1-207ENST00000556040 CD109Q6YHK3 1445 aa23.7■■□□□ 1.38
ZFYVE1-207ENST00000556040 NUP153P49790 1475 aaKnown RBP23.69■■□□□ 1.38
ZFYVE1-207ENST00000556040 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.68■■□□□ 1.38
ZFYVE1-207ENST00000556040 HNRNPUL2Q1KMD3 747 aaKnown RBP23.68■■□□□ 1.38
ZFYVE1-207ENST00000556040 MAGI3Q5TCQ9 1506 aa23.67■■□□□ 1.38
ZFYVE1-207ENST00000556040 COL17A1Q9UMD9 1497 aaPredicted RBP23.65■■□□□ 1.38
ZFYVE1-207ENST00000556040 ABCA9Q8IUA7 1624 aa23.62■■□□□ 1.37
ZFYVE1-207ENST00000556040 ARHGAP35Q9NRY4 1499 aa23.57■■□□□ 1.36
ZFYVE1-207ENST00000556040 FMN1Q68DA7 1419 aa23.55■■□□□ 1.36
ZFYVE1-207ENST00000556040 HECW1Q76N89 1606 aa23.52■■□□□ 1.36
ZFYVE1-207ENST00000556040 PLEKHD1A6NEE1 506 aa23.52■■□□□ 1.36
ZFYVE1-207ENST00000556040 CDK13Q14004 1512 aaKnown RBP23.51■■□□□ 1.35
ZFYVE1-207ENST00000556040 ATP1B4Q9UN42 357 aaPredicted RBP23.48■■□□□ 1.35
ZFYVE1-207ENST00000556040 ARAP3Q8WWN8 1544 aa23.48■■□□□ 1.35
ZFYVE1-207ENST00000556040 KDM4FA0A1W2PPD8 638 aa23.47■■□□□ 1.35
ZFYVE1-207ENST00000556040 NEO1Q92859 1461 aa23.44■■□□□ 1.34
ZFYVE1-207ENST00000556040 PHLDB1Q86UU1 1377 aa23.44■■□□□ 1.34
ZFYVE1-207ENST00000556040 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.43■■□□□ 1.34
ZFYVE1-207ENST00000556040 ADGRL1O94910 1474 aa23.43■■□□□ 1.34
ZFYVE1-207ENST00000556040 TTC37Q6PGP7 1564 aa23.43■■□□□ 1.34
ZFYVE1-207ENST00000556040 CFAP74Q9C0B2 1584 aa23.4■■□□□ 1.34
ZFYVE1-207ENST00000556040 LRRIQ1Q96JM4 1722 aa23.39■■□□□ 1.33
ZFYVE1-207ENST00000556040 PCF11O94913 1555 aaKnown RBP23.36■■□□□ 1.33
ZFYVE1-207ENST00000556040 CDK11AQ9UQ88 783 aaPredicted RBP23.35■■□□□ 1.33
ZFYVE1-207ENST00000556040 FANCAO15360 1455 aa23.35■■□□□ 1.33
ZFYVE1-207ENST00000556040 FRMPD1Q5SYB0 1578 aa23.33■■□□□ 1.33
ZFYVE1-207ENST00000556040 RAPGEF3O95398 923 aa23.33■■□□□ 1.33
ZFYVE1-207ENST00000556040 MYO5CQ9NQX4 1742 aa23.32■■□□□ 1.32
ZFYVE1-207ENST00000556040 KIF14Q15058 1648 aa23.32■■□□□ 1.32
ZFYVE1-207ENST00000556040 CLIP1P30622 1438 aa23.32■■□□□ 1.32
ZFYVE1-207ENST00000556040 AKNAQ7Z591 1439 aa23.31■■□□□ 1.32
ZFYVE1-207ENST00000556040 CASKIN1Q8WXD9 1431 aa23.31■■□□□ 1.32
ZFYVE1-207ENST00000556040 RICTORQ6R327 1708 aa23.3■■□□□ 1.32
ZFYVE1-207ENST00000556040 TROQ12816 1431 aaPredicted RBP23.29■■□□□ 1.32
ZFYVE1-207ENST00000556040 CCDC18Q5T9S5 1454 aa23.29■■□□□ 1.32
ZFYVE1-207ENST00000556040 DENND4BO75064 1496 aaPredicted RBP23.28■■□□□ 1.32
ZFYVE1-207ENST00000556040 FYCO1Q9BQS8 1478 aa23.26■■□□□ 1.31
ZFYVE1-207ENST00000556040 PLCH2O75038 1416 aa23.25■■□□□ 1.31
ZFYVE1-207ENST00000556040 ARHGEF40Q8TER5 1519 aa23.22■■□□□ 1.31
ZFYVE1-207ENST00000556040 ARHGAP5Q13017 1502 aa23.18■■□□□ 1.3
ZFYVE1-207ENST00000556040 ZMYM4Q5VZL5 1548 aa23.18■■□□□ 1.3
ZFYVE1-207ENST00000556040 EFCAB2Q5VUJ9 269 aa23.17■■□□□ 1.3
ZFYVE1-207ENST00000556040 SCAPERQ9BY12 1400 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms