RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 IGF1RP08069 1367 aa25.51■■□□□ 1.67
CHMP4BP1-201ENST00000556017 CUL7Q14999 1698 aa25.45■■□□□ 1.66
CHMP4BP1-201ENST00000556017 ADCY10Q96PN6 1610 aa25.45■■□□□ 1.66
CHMP4BP1-201ENST00000556017 KIAA0586Q9BVV6 1533 aa25.44■■□□□ 1.66
CHMP4BP1-201ENST00000556017 KIF27Q86VH2 1401 aa25.42■■□□□ 1.66
CHMP4BP1-201ENST00000556017 MAPKBP1O60336 1514 aa25.39■■□□□ 1.66
CHMP4BP1-201ENST00000556017 ABCC10Q5T3U5 1492 aa25.37■■□□□ 1.65
CHMP4BP1-201ENST00000556017 DIP2BQ9P265 1576 aa25.35■■□□□ 1.65
CHMP4BP1-201ENST00000556017 AEBP2Q6ZN18 517 aaPredicted RBP25.3■■□□□ 1.64
CHMP4BP1-201ENST00000556017 CARMIL1Q5VZK9 1371 aa25.28■■□□□ 1.64
CHMP4BP1-201ENST00000556017 FAM69CQ0P6D2 419 aa25.27■■□□□ 1.64
CHMP4BP1-201ENST00000556017 NPM1P06748 294 aaKnown RBP eCLIP25.21■■□□□ 1.63
CHMP4BP1-201ENST00000556017 IQGAP2Q13576 1575 aa25.18■■□□□ 1.62
CHMP4BP1-201ENST00000556017 PTPRGP23470 1445 aa25.18■■□□□ 1.62
CHMP4BP1-201ENST00000556017 TSPOAP1O95153 1857 aa25.15■■□□□ 1.62
CHMP4BP1-201ENST00000556017 DISP1Q96F81 1524 aa25.14■■□□□ 1.62
CHMP4BP1-201ENST00000556017 TNIKQ9UKE5 1360 aa25.13■■□□□ 1.61
CHMP4BP1-201ENST00000556017 ABCC2Q92887 1545 aa25.12■■□□□ 1.61
CHMP4BP1-201ENST00000556017 KDM6BO15054 1643 aa25.09■■□□□ 1.61
CHMP4BP1-201ENST00000556017 CARMIL2Q6F5E8 1435 aa25.09■■□□□ 1.61
CHMP4BP1-201ENST00000556017 UHRF1BP1LA0JNW5 1464 aa25.08■■□□□ 1.6
CHMP4BP1-201ENST00000556017 PPRC1Q5VV67 1664 aaKnown RBP25.07■■□□□ 1.6
CHMP4BP1-201ENST00000556017 UGGT2Q9NYU1 1516 aa25.06■■□□□ 1.6
CHMP4BP1-201ENST00000556017 TTBK1Q5TCY1 1321 aaPredicted RBP25.04■■□□□ 1.6
CHMP4BP1-201ENST00000556017 ASXL2Q76L83 1435 aa25.03■■□□□ 1.6
CHMP4BP1-201ENST00000556017 RAPGEF2Q9Y4G8 1499 aa25.03■■□□□ 1.6
CHMP4BP1-201ENST00000556017 GLI2P10070 1586 aa25.02■■□□□ 1.6
CHMP4BP1-201ENST00000556017 UACAQ9BZF9 1416 aa25.01■■□□□ 1.59
CHMP4BP1-201ENST00000556017 KIAA0556O60303 1618 aa24.98■■□□□ 1.59
CHMP4BP1-201ENST00000556017 KDM5BQ9UGL1 1544 aa24.98■■□□□ 1.59
CHMP4BP1-201ENST00000556017 PLB1Q6P1J6 1458 aa24.98■■□□□ 1.59
CHMP4BP1-201ENST00000556017 KDM4FA0A1W2PPD8 638 aa24.96■■□□□ 1.59
CHMP4BP1-201ENST00000556017 ZCCHC11Q5TAX3 1644 aaKnown RBP24.94■■□□□ 1.58
CHMP4BP1-201ENST00000556017 CTTNBP2Q8WZ74 1663 aa24.91■■□□□ 1.58
CHMP4BP1-201ENST00000556017 MAP3K4Q9Y6R4 1608 aa24.91■■□□□ 1.58
CHMP4BP1-201ENST00000556017 EPRSP07814 1512 aaKnown RBP24.91■■□□□ 1.58
CHMP4BP1-201ENST00000556017 COL17A1Q9UMD9 1497 aaPredicted RBP24.89■■□□□ 1.58
CHMP4BP1-201ENST00000556017 PRXQ9BXM0 1461 aa24.83■■□□□ 1.56
CHMP4BP1-201ENST00000556017 ABCA8O94911 1581 aa24.79■■□□□ 1.56
CHMP4BP1-201ENST00000556017 WDR7Q9Y4E6 1490 aa24.77■■□□□ 1.56
CHMP4BP1-201ENST00000556017 GOLGA3Q08378 1498 aa24.71■■□□□ 1.55
CHMP4BP1-201ENST00000556017 TEX14Q8IWB6 1497 aa24.7■■□□□ 1.54
CHMP4BP1-201ENST00000556017 ADGRL1O94910 1474 aa24.69■■□□□ 1.54
CHMP4BP1-201ENST00000556017 CFAP43Q8NDM7 1665 aa24.66■■□□□ 1.54
CHMP4BP1-201ENST00000556017 MAGI3Q5TCQ9 1506 aa24.64■■□□□ 1.53
CHMP4BP1-201ENST00000556017 CD109Q6YHK3 1445 aa24.59■■□□□ 1.53
CHMP4BP1-201ENST00000556017 SAMD9Q5K651 1589 aa24.58■■□□□ 1.52
CHMP4BP1-201ENST00000556017 ATP10BO94823 1461 aa24.56■■□□□ 1.52
CHMP4BP1-201ENST00000556017 KCNH8Q96L42 1107 aa24.55■■□□□ 1.52
CHMP4BP1-201ENST00000556017 P3H3Q8IVL6 736 aa24.51■■□□□ 1.51
CHMP4BP1-201ENST00000556017 CSRNP3Q8WYN3 585 aa24.49■■□□□ 1.51
CHMP4BP1-201ENST00000556017 ABCA9Q8IUA7 1624 aa24.47■■□□□ 1.51
CHMP4BP1-201ENST00000556017 ARAP3Q8WWN8 1544 aa24.46■■□□□ 1.51
CHMP4BP1-201ENST00000556017 ARID3CA6NKF2 412 aa24.46■■□□□ 1.51
CHMP4BP1-201ENST00000556017 RAPGEF6Q8TEU7 1601 aa24.45■■□□□ 1.5
CHMP4BP1-201ENST00000556017 KIF21BO75037 1637 aa24.43■■□□□ 1.5
CHMP4BP1-201ENST00000556017 HECW2Q9P2P5 1572 aa24.42■■□□□ 1.5
CHMP4BP1-201ENST00000556017 NUP153P49790 1475 aaKnown RBP24.39■■□□□ 1.5
CHMP4BP1-201ENST00000556017 EEA1Q15075 1411 aa24.35■■□□□ 1.49
CHMP4BP1-201ENST00000556017 FHOD3Q2V2M9 1422 aa24.34■■□□□ 1.49
CHMP4BP1-201ENST00000556017 FRMPD1Q5SYB0 1578 aa24.33■■□□□ 1.49
CHMP4BP1-201ENST00000556017 NEO1Q92859 1461 aa24.3■■□□□ 1.48
CHMP4BP1-201ENST00000556017 PHLDB1Q86UU1 1377 aa24.29■■□□□ 1.48
CHMP4BP1-201ENST00000556017 ADAMTSL3P82987 1691 aa24.27■■□□□ 1.48
CHMP4BP1-201ENST00000556017 RAPGEF3O95398 923 aa24.27■■□□□ 1.48
CHMP4BP1-201ENST00000556017 ILDR1Q86SU0 546 aaPredicted RBP24.26■■□□□ 1.47
CHMP4BP1-201ENST00000556017 FAM9AQ8IZU1 332 aaPredicted RBP24.24■■□□□ 1.47
CHMP4BP1-201ENST00000556017 RANGAP1P46060 587 aaPredicted RBP24.23■■□□□ 1.47
CHMP4BP1-201ENST00000556017 RICTORQ6R327 1708 aa24.21■■□□□ 1.47
CHMP4BP1-201ENST00000556017 EFCAB5A4FU69 1503 aa24.2■■□□□ 1.47
CHMP4BP1-201ENST00000556017 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.2■■□□□ 1.46
CHMP4BP1-201ENST00000556017 BCORL1Q5H9F3 1711 aa24.18■■□□□ 1.46
CHMP4BP1-201ENST00000556017 TTC37Q6PGP7 1564 aa24.18■■□□□ 1.46
CHMP4BP1-201ENST00000556017 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.18■■□□□ 1.46
CHMP4BP1-201ENST00000556017 HNRNPUL2Q1KMD3 747 aaKnown RBP24.18■■□□□ 1.46
CHMP4BP1-201ENST00000556017 PTPRMP28827 1452 aa24.16■■□□□ 1.46
CHMP4BP1-201ENST00000556017 CDK13Q14004 1512 aaKnown RBP24.15■■□□□ 1.46
CHMP4BP1-201ENST00000556017 ARHGEF40Q8TER5 1519 aa24.14■■□□□ 1.45
CHMP4BP1-201ENST00000556017 MADDQ8WXG6 1647 aa24.13■■□□□ 1.45
CHMP4BP1-201ENST00000556017 SIGLEC1Q9BZZ2 1709 aa24.13■■□□□ 1.45
CHMP4BP1-201ENST00000556017 PLEKHD1A6NEE1 506 aa24.12■■□□□ 1.45
CHMP4BP1-201ENST00000556017 AKNAQ7Z591 1439 aa24.11■■□□□ 1.45
CHMP4BP1-201ENST00000556017 FANCAO15360 1455 aa24.1■■□□□ 1.45
CHMP4BP1-201ENST00000556017 DENND4BO75064 1496 aaPredicted RBP24.09■■□□□ 1.45
CHMP4BP1-201ENST00000556017 CFAP74Q9C0B2 1584 aa24.08■■□□□ 1.45
CHMP4BP1-201ENST00000556017 ZMYM4Q5VZL5 1548 aa24.08■■□□□ 1.45
CHMP4BP1-201ENST00000556017 ARHGAP35Q9NRY4 1499 aa24.05■■□□□ 1.44
CHMP4BP1-201ENST00000556017 YEATS2Q9ULM3 1422 aa24.02■■□□□ 1.44
CHMP4BP1-201ENST00000556017 RIMS1Q86UR5 1692 aaKnown RBP24.02■■□□□ 1.44
CHMP4BP1-201ENST00000556017 LRRIQ1Q96JM4 1722 aa24.01■■□□□ 1.43
CHMP4BP1-201ENST00000556017 HECW1Q76N89 1606 aa23.99■■□□□ 1.43
CHMP4BP1-201ENST00000556017 PLCH2O75038 1416 aa23.99■■□□□ 1.43
CHMP4BP1-201ENST00000556017 LMTK3Q96Q04 1460 aa23.99■■□□□ 1.43
CHMP4BP1-201ENST00000556017 CHIC1Q5VXU3 224 aa23.98■■□□□ 1.43
CHMP4BP1-201ENST00000556017 PCF11O94913 1555 aaKnown RBP23.97■■□□□ 1.43
CHMP4BP1-201ENST00000556017 KIF14Q15058 1648 aa23.97■■□□□ 1.43
CHMP4BP1-201ENST00000556017 ZFYVE16Q7Z3T8 1539 aa23.97■■□□□ 1.43
CHMP4BP1-201ENST00000556017 ARID4BQ4LE39 1312 aaPredicted RBP23.96■■□□□ 1.43
CHMP4BP1-201ENST00000556017 EHMT2Q96KQ7 1210 aa23.96■■□□□ 1.43
CHMP4BP1-201ENST00000556017 FMN1Q68DA7 1419 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms