RNA–Protein interactions for RNA: ENST00000555679.5

PSMC1-205, Transcript of proteasome 26S subunit, ATPase 1, humanhuman

TSL 2

Gene PSMC1, Length 606 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC1-205ENST00000555679 FARP1Q9Y4F1 1045 aaPredicted RBP14.57□□□□□ -0.08
PSMC1-205ENST00000555679 HMGXB3Q12766 1538 aa14.55□□□□□ -0.08
PSMC1-205ENST00000555679 SMARCA2P51531 1590 aa14.54□□□□□ -0.08
PSMC1-205ENST00000555679 SMARCA4P51532 1647 aa14.52□□□□□ -0.08
PSMC1-205ENST00000555679 NESP48681 1621 aa14.51□□□□□ -0.09
PSMC1-205ENST00000555679 FKBP8Q14318 412 aa14.46□□□□□ -0.09
PSMC1-205ENST00000555679 THOC2Q8NI27 1593 aaKnown RBP14.43□□□□□ -0.1
PSMC1-205ENST00000555679 BAZ1BQ9UIG0 1483 aaKnown RBP14.42□□□□□ -0.1
PSMC1-205ENST00000555679 MNX1P50219 401 aaPredicted RBP14.41□□□□□ -0.1
PSMC1-205ENST00000555679 PEG3Q9GZU2 1588 aa14.4□□□□□ -0.1
PSMC1-205ENST00000555679 BAZ1AQ9NRL2 1556 aaPredicted RBP14.4□□□□□ -0.1
PSMC1-205ENST00000555679 CD44P16070 742 aaKnown RBP14.4□□□□□ -0.1
PSMC1-205ENST00000555679 LAMC3Q9Y6N6 1575 aa14.38□□□□□ -0.11
PSMC1-205ENST00000555679 GABBR2O75899 941 aa14.35□□□□□ -0.11
PSMC1-205ENST00000555679 KIF21AQ7Z4S6 1674 aa14.33□□□□□ -0.11
PSMC1-205ENST00000555679 MROH2BQ7Z745 1585 aa14.28□□□□□ -0.12
PSMC1-205ENST00000555679 PDS5BQ9NTI5 1447 aa14.28□□□□□ -0.12
PSMC1-205ENST00000555679 ZRANB1Q9UGI0 708 aa14.25□□□□□ -0.13
PSMC1-205ENST00000555679 NPM1P06748 294 aaKnown RBP eCLIP14.21□□□□□ -0.13
PSMC1-205ENST00000555679 MIER1Q8N108 512 aa14.2□□□□□ -0.14
PSMC1-205ENST00000555679 CADPSQ9ULU8 1353 aa14.2□□□□□ -0.14
PSMC1-205ENST00000555679 ZNF579Q8NAF0 562 aaKnown RBP14.19□□□□□ -0.14
PSMC1-205ENST00000555679 MRC2Q9UBG0 1479 aa14.18□□□□□ -0.14
PSMC1-205ENST00000555679 TRIM41Q8WV44 630 aa14.18□□□□□ -0.14
PSMC1-205ENST00000555679 WDR62O43379 1518 aa14.18□□□□□ -0.14
PSMC1-205ENST00000555679 PHF12Q96QT6 1004 aa14.12□□□□□ -0.15
PSMC1-205ENST00000555679 POTEIP0CG38 1075 aa14.11□□□□□ -0.15
PSMC1-205ENST00000555679 WIZO95785 1651 aa14.1□□□□□ -0.15
PSMC1-205ENST00000555679 PLCD3Q8N3E9 789 aa14.09□□□□□ -0.15
PSMC1-205ENST00000555679 CEP164Q9UPV0 1460 aa14.07□□□□□ -0.16
PSMC1-205ENST00000555679 PAK3O75914 559 aaPredicted RBP14.07□□□□□ -0.16
PSMC1-205ENST00000555679 GALR2O43603 387 aaPredicted RBP14.06□□□□□ -0.16
PSMC1-205ENST00000555679 CLCN6P51797 869 aa14.05□□□□□ -0.16
PSMC1-205ENST00000555679 TSPYL2Q9H2G4 693 aaPredicted RBP14.05□□□□□ -0.16
PSMC1-205ENST00000555679 PLEKHG5O94827 1062 aa14.04□□□□□ -0.16
PSMC1-205ENST00000555679 FANCD2Q9BXW9 1451 aa14.04□□□□□ -0.16
PSMC1-205ENST00000555679 RASEFQ8IZ41 740 aa14.03□□□□□ -0.16
PSMC1-205ENST00000555679 CFTRP13569 1480 aa14□□□□□ -0.17
PSMC1-205ENST00000555679 CCDC61Q9Y6R9 512 aa13.99□□□□□ -0.17
PSMC1-205ENST00000555679 FBXO3Q9UK99 471 aa13.98□□□□□ -0.17
PSMC1-205ENST00000555679 NUBP1P53384 320 aa13.96□□□□□ -0.17
PSMC1-205ENST00000555679 URB2Q14146 1524 aaKnown RBP13.95□□□□□ -0.18
PSMC1-205ENST00000555679 MS4A3Q96HJ5 214 aa13.92□□□□□ -0.18
PSMC1-205ENST00000555679 DCBLD2Q96PD2 775 aa13.92□□□□□ -0.18
PSMC1-205ENST00000555679 TOP2AP11388 1531 aaKnown RBP13.9□□□□□ -0.18
PSMC1-205ENST00000555679 RSF1Q96T23 1441 aaPredicted RBP13.9□□□□□ -0.19
PSMC1-205ENST00000555679 VASPP50552 380 aaPredicted RBP13.89□□□□□ -0.19
PSMC1-205ENST00000555679 KIF12Q96FN5 646 aa13.89□□□□□ -0.19
PSMC1-205ENST00000555679 ZBTB47Q9UFB7 747 aaPredicted RBP13.89□□□□□ -0.19
PSMC1-205ENST00000555679 PRDM2Q13029 1718 aa13.88□□□□□ -0.19
PSMC1-205ENST00000555679 RIMBP3CA6NJZ7 1639 aa13.86□□□□□ -0.19
PSMC1-205ENST00000555679 RIMBP3BA6NNM3 1639 aa13.86□□□□□ -0.19
PSMC1-205ENST00000555679 RIMBP3Q9UFD9 1639 aa13.86□□□□□ -0.19
PSMC1-205ENST00000555679 MAP3K13O43283 966 aa13.82□□□□□ -0.2
PSMC1-205ENST00000555679 PELP1Q8IZL8 1130 aaKnown RBP13.82□□□□□ -0.2
PSMC1-205ENST00000555679 ZNF608Q9ULD9 1512 aaPredicted RBP13.81□□□□□ -0.2
PSMC1-205ENST00000555679 IFT140Q96RY7 1462 aa13.8□□□□□ -0.2
PSMC1-205ENST00000555679 LHX8Q68G74 356 aa13.8□□□□□ -0.2
PSMC1-205ENST00000555679 TRPC6Q9Y210 931 aa13.79□□□□□ -0.2
PSMC1-205ENST00000555679 ARHGEF11O15085 1522 aa13.79□□□□□ -0.2
PSMC1-205ENST00000555679 TOPBP1Q92547 1522 aa13.76□□□□□ -0.21
PSMC1-205ENST00000555679 ATMINO43313 823 aaPredicted RBP13.75□□□□□ -0.21
PSMC1-205ENST00000555679 FAM212AQ96EL1 285 aa13.75□□□□□ -0.21
PSMC1-205ENST00000555679 CCDC88BA6NC98 1476 aa13.74□□□□□ -0.21
PSMC1-205ENST00000555679 ASTLQ6HA08 431 aaPredicted RBP13.74□□□□□ -0.21
PSMC1-205ENST00000555679 KLHL34Q8N239 644 aa13.74□□□□□ -0.21
PSMC1-205ENST00000555679 IFNLR1Q8IU57 520 aaPredicted RBP13.73□□□□□ -0.21
PSMC1-205ENST00000555679 EIF4G3O43432 1585 aaKnown RBP13.73□□□□□ -0.21
PSMC1-205ENST00000555679 DCAF8Q5TAQ9 597 aa13.71□□□□□ -0.21
PSMC1-205ENST00000555679 ABCC8Q09428 1581 aa13.71□□□□□ -0.22
PSMC1-205ENST00000555679 BMP2KQ9NSY1 1161 aaPredicted RBP13.69□□□□□ -0.22
PSMC1-205ENST00000555679 DNMBPQ6XZF7 1577 aa13.69□□□□□ -0.22
PSMC1-205ENST00000555679 CHD1O14646 1710 aa13.69□□□□□ -0.22
PSMC1-205ENST00000555679 ATN1P54259 1190 aaPredicted RBP13.68□□□□□ -0.22
PSMC1-205ENST00000555679 CYB5RLQ6IPT4 315 aa13.67□□□□□ -0.22
PSMC1-205ENST00000555679 PCDHB13Q9Y5F0 798 aa13.67□□□□□ -0.22
PSMC1-205ENST00000555679 TARBP1Q13395 1621 aaKnown RBP13.67□□□□□ -0.22
PSMC1-205ENST00000555679 POTEB2H3BUK9 544 aa13.66□□□□□ -0.22
PSMC1-205ENST00000555679 IFNL1Q8IU54 200 aa13.65□□□□□ -0.22
PSMC1-205ENST00000555679 AQRO60306 1485 aaKnown RBP eCLIP13.65□□□□□ -0.22
PSMC1-205ENST00000555679 ARAP1Q96P48 1450 aa13.64□□□□□ -0.23
PSMC1-205ENST00000555679 PYGBP11216 843 aa13.64□□□□□ -0.23
PSMC1-205ENST00000555679 SGIP1Q9BQI5 828 aa13.64□□□□□ -0.23
PSMC1-205ENST00000555679 TIE1P35590 1138 aa13.61□□□□□ -0.23
PSMC1-205ENST00000555679 POLA1P09884 1462 aaPredicted RBP13.6□□□□□ -0.23
PSMC1-205ENST00000555679 TTLL13PA6NNM8 815 aa13.59□□□□□ -0.23
PSMC1-205ENST00000555679 METRNQ9UJH8 293 aa13.59□□□□□ -0.23
PSMC1-205ENST00000555679 SLC39A7Q92504 469 aa13.57□□□□□ -0.24
PSMC1-205ENST00000555679 SPOCK2Q92563 424 aa13.57□□□□□ -0.24
PSMC1-205ENST00000555679 C7P10643 843 aa13.56□□□□□ -0.24
PSMC1-205ENST00000555679 GSE1Q14687 1217 aa13.55□□□□□ -0.24
PSMC1-205ENST00000555679 RAD54L2Q9Y4B4 1467 aa13.55□□□□□ -0.24
PSMC1-205ENST00000555679 PCDHB8Q9UN66 801 aa13.54□□□□□ -0.24
PSMC1-205ENST00000555679 POTEFA5A3E0 1075 aa13.53□□□□□ -0.24
PSMC1-205ENST00000555679 POTEJP0CG39 1038 aa13.53□□□□□ -0.24
PSMC1-205ENST00000555679 TDRD9Q8NDG6 1382 aaKnown RBP13.52□□□□□ -0.25
PSMC1-205ENST00000555679 CLASP1Q7Z460 1538 aa13.52□□□□□ -0.25
PSMC1-205ENST00000555679 WDR97A6NE52 1622 aa13.51□□□□□ -0.25
PSMC1-205ENST00000555679 SOGA1O94964 1423 aa13.51□□□□□ -0.25
PSMC1-205ENST00000555679 OTUD5Q96G74 571 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms