RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 CARMIL1Q5VZK9 1371 aa26.46■■□□□ 1.83
SNX6-205ENST00000555648 CUL7Q14999 1698 aa26.45■■□□□ 1.82
SNX6-205ENST00000555648 RUSC2Q8N2Y8 1516 aa26.44■■□□□ 1.82
SNX6-205ENST00000555648 KIAA0586Q9BVV6 1533 aa26.43■■□□□ 1.82
SNX6-205ENST00000555648 NPM1P06748 294 aaKnown RBP eCLIP26.38■■□□□ 1.81
SNX6-205ENST00000555648 TTBK1Q5TCY1 1321 aaPredicted RBP26.26■■□□□ 1.79
SNX6-205ENST00000555648 CARMIL2Q6F5E8 1435 aa26.25■■□□□ 1.79
SNX6-205ENST00000555648 RAPGEF2Q9Y4G8 1499 aa26.22■■□□□ 1.79
SNX6-205ENST00000555648 PTPRGP23470 1445 aa26.22■■□□□ 1.79
SNX6-205ENST00000555648 TNIKQ9UKE5 1360 aa26.17■■□□□ 1.78
SNX6-205ENST00000555648 IQGAP2Q13576 1575 aa26.16■■□□□ 1.78
SNX6-205ENST00000555648 FAM69CQ0P6D2 419 aa26.16■■□□□ 1.78
SNX6-205ENST00000555648 ADCY10Q96PN6 1610 aa26.1■■□□□ 1.77
SNX6-205ENST00000555648 MAPKBP1O60336 1514 aa26.08■■□□□ 1.77
SNX6-205ENST00000555648 ABCC10Q5T3U5 1492 aa26.07■■□□□ 1.76
SNX6-205ENST00000555648 DISP1Q96F81 1524 aa26■■□□□ 1.75
SNX6-205ENST00000555648 UGGT2Q9NYU1 1516 aa25.99■■□□□ 1.75
SNX6-205ENST00000555648 UACAQ9BZF9 1416 aa25.98■■□□□ 1.75
SNX6-205ENST00000555648 ABCC2Q92887 1545 aa25.98■■□□□ 1.75
SNX6-205ENST00000555648 AEBP2Q6ZN18 517 aaPredicted RBP25.96■■□□□ 1.75
SNX6-205ENST00000555648 KIF13AQ9H1H9 1805 aa25.95■■□□□ 1.75
SNX6-205ENST00000555648 PRXQ9BXM0 1461 aa25.94■■□□□ 1.74
SNX6-205ENST00000555648 DIP2BQ9P265 1576 aa25.94■■□□□ 1.74
SNX6-205ENST00000555648 UHRF1BP1LA0JNW5 1464 aa25.93■■□□□ 1.74
SNX6-205ENST00000555648 FAM9AQ8IZU1 332 aaPredicted RBP25.92■■□□□ 1.74
SNX6-205ENST00000555648 CSRNP3Q8WYN3 585 aa25.92■■□□□ 1.74
SNX6-205ENST00000555648 GOLGA3Q08378 1498 aa25.91■■□□□ 1.74
SNX6-205ENST00000555648 PLB1Q6P1J6 1458 aa25.9■■□□□ 1.74
SNX6-205ENST00000555648 KIAA0556O60303 1618 aa25.89■■□□□ 1.74
SNX6-205ENST00000555648 ASXL2Q76L83 1435 aa25.88■■□□□ 1.73
SNX6-205ENST00000555648 CTTNBP2Q8WZ74 1663 aa25.83■■□□□ 1.73
SNX6-205ENST00000555648 EEA1Q15075 1411 aa25.8■■□□□ 1.72
SNX6-205ENST00000555648 KDM5BQ9UGL1 1544 aa25.8■■□□□ 1.72
SNX6-205ENST00000555648 P3H3Q8IVL6 736 aa25.75■■□□□ 1.71
SNX6-205ENST00000555648 KDM6BO15054 1643 aa25.71■■□□□ 1.71
SNX6-205ENST00000555648 TSPOAP1O95153 1857 aa25.71■■□□□ 1.71
SNX6-205ENST00000555648 GLI2P10070 1586 aa25.71■■□□□ 1.71
SNX6-205ENST00000555648 EPRSP07814 1512 aaKnown RBP25.7■■□□□ 1.7
SNX6-205ENST00000555648 ZCCHC11Q5TAX3 1644 aaKnown RBP25.69■■□□□ 1.7
SNX6-205ENST00000555648 RANGAP1P46060 587 aaPredicted RBP25.68■■□□□ 1.7
SNX6-205ENST00000555648 WDR7Q9Y4E6 1490 aa25.66■■□□□ 1.7
SNX6-205ENST00000555648 KCNH8Q96L42 1107 aa25.65■■□□□ 1.7
SNX6-205ENST00000555648 ABCA8O94911 1581 aa25.64■■□□□ 1.69
SNX6-205ENST00000555648 ARID3CA6NKF2 412 aa25.62■■□□□ 1.69
SNX6-205ENST00000555648 TEX14Q8IWB6 1497 aa25.61■■□□□ 1.69
SNX6-205ENST00000555648 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.57■■□□□ 1.68
SNX6-205ENST00000555648 HNRNPUL2Q1KMD3 747 aaKnown RBP25.57■■□□□ 1.68
SNX6-205ENST00000555648 CHIC1Q5VXU3 224 aa25.57■■□□□ 1.68
SNX6-205ENST00000555648 CD109Q6YHK3 1445 aa25.53■■□□□ 1.68
SNX6-205ENST00000555648 MAP3K4Q9Y6R4 1608 aa25.52■■□□□ 1.68
SNX6-205ENST00000555648 UBTFP17480 764 aaKnown RBP25.51■■□□□ 1.67
SNX6-205ENST00000555648 EHMT2Q96KQ7 1210 aa25.51■■□□□ 1.67
SNX6-205ENST00000555648 SAMD9Q5K651 1589 aa25.51■■□□□ 1.67
SNX6-205ENST00000555648 PPRC1Q5VV67 1664 aaKnown RBP25.5■■□□□ 1.67
SNX6-205ENST00000555648 ATP10BO94823 1461 aa25.48■■□□□ 1.67
SNX6-205ENST00000555648 FHOD3Q2V2M9 1422 aa25.46■■□□□ 1.67
SNX6-205ENST00000555648 KIF21BO75037 1637 aa25.46■■□□□ 1.67
SNX6-205ENST00000555648 MAGI3Q5TCQ9 1506 aa25.43■■□□□ 1.66
SNX6-205ENST00000555648 COL17A1Q9UMD9 1497 aaPredicted RBP25.43■■□□□ 1.66
SNX6-205ENST00000555648 RAPGEF6Q8TEU7 1601 aa25.41■■□□□ 1.66
SNX6-205ENST00000555648 KDM4FA0A1W2PPD8 638 aa25.41■■□□□ 1.66
SNX6-205ENST00000555648 CFAP43Q8NDM7 1665 aa25.39■■□□□ 1.66
SNX6-205ENST00000555648 EFCAB5A4FU69 1503 aa25.38■■□□□ 1.65
SNX6-205ENST00000555648 PLEKHD1A6NEE1 506 aa25.37■■□□□ 1.65
SNX6-205ENST00000555648 NUP153P49790 1475 aaKnown RBP25.34■■□□□ 1.65
SNX6-205ENST00000555648 ATP1B4Q9UN42 357 aaPredicted RBP25.31■■□□□ 1.64
SNX6-205ENST00000555648 PHLDB1Q86UU1 1377 aa25.29■■□□□ 1.64
SNX6-205ENST00000555648 ADGRL1O94910 1474 aa25.25■■□□□ 1.63
SNX6-205ENST00000555648 ABCA9Q8IUA7 1624 aa25.24■■□□□ 1.63
SNX6-205ENST00000555648 FMN1Q68DA7 1419 aa25.23■■□□□ 1.63
SNX6-205ENST00000555648 ARAP3Q8WWN8 1544 aa25.22■■□□□ 1.63
SNX6-205ENST00000555648 NEO1Q92859 1461 aa25.19■■□□□ 1.62
SNX6-205ENST00000555648 CDK11AQ9UQ88 783 aaPredicted RBP25.18■■□□□ 1.62
SNX6-205ENST00000555648 ARHGAP35Q9NRY4 1499 aa25.17■■□□□ 1.62
SNX6-205ENST00000555648 RAPGEF3O95398 923 aa25.17■■□□□ 1.62
SNX6-205ENST00000555648 CDK13Q14004 1512 aaKnown RBP25.12■■□□□ 1.61
SNX6-205ENST00000555648 HECW1Q76N89 1606 aa25.09■■□□□ 1.61
SNX6-205ENST00000555648 FANCAO15360 1455 aa25.07■■□□□ 1.6
SNX6-205ENST00000555648 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.07■■□□□ 1.6
SNX6-205ENST00000555648 AKNAQ7Z591 1439 aa25.06■■□□□ 1.6
SNX6-205ENST00000555648 DENND4BO75064 1496 aaPredicted RBP25.05■■□□□ 1.6
SNX6-205ENST00000555648 ARID4BQ4LE39 1312 aaPredicted RBP25.04■■□□□ 1.6
SNX6-205ENST00000555648 CLIP1P30622 1438 aa25■■□□□ 1.59
SNX6-205ENST00000555648 CFAP74Q9C0B2 1584 aa25■■□□□ 1.59
SNX6-205ENST00000555648 TTC37Q6PGP7 1564 aa24.99■■□□□ 1.59
SNX6-205ENST00000555648 PLCH2O75038 1416 aa24.98■■□□□ 1.59
SNX6-205ENST00000555648 EFCAB2Q5VUJ9 269 aa24.98■■□□□ 1.59
SNX6-205ENST00000555648 TROQ12816 1431 aaPredicted RBP24.96■■□□□ 1.59
SNX6-205ENST00000555648 CASKIN1Q8WXD9 1431 aa24.94■■□□□ 1.58
SNX6-205ENST00000555648 SCAPERQ9BY12 1400 aa24.92■■□□□ 1.58
SNX6-205ENST00000555648 FRMPD1Q5SYB0 1578 aa24.92■■□□□ 1.58
SNX6-205ENST00000555648 CCDC18Q5T9S5 1454 aa24.9■■□□□ 1.58
SNX6-205ENST00000555648 KIF14Q15058 1648 aa24.9■■□□□ 1.58
SNX6-205ENST00000555648 MYT1LQ9UL68 1186 aa24.86■■□□□ 1.57
SNX6-205ENST00000555648 MAGI2Q86UL8 1455 aa24.85■■□□□ 1.57
SNX6-205ENST00000555648 ARHGAP5Q13017 1502 aa24.85■■□□□ 1.57
SNX6-205ENST00000555648 ARHGEF40Q8TER5 1519 aa24.85■■□□□ 1.57
SNX6-205ENST00000555648 POGZQ7Z3K3 1410 aa24.85■■□□□ 1.57
SNX6-205ENST00000555648 PCF11O94913 1555 aaKnown RBP24.84■■□□□ 1.57
SNX6-205ENST00000555648 ZFYVE16Q7Z3T8 1539 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms