RNA–Protein interactions for RNA: ENST00000555561.5

SDR39U1-213, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 452 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-213ENST00000555561 ARHGAP35Q9NRY4 1499 aa17.71■□□□□ 0.43
SDR39U1-213ENST00000555561 AQRO60306 1485 aaKnown RBP eCLIP17.65■□□□□ 0.42
SDR39U1-213ENST00000555561 GRIN2BQ13224 1484 aa17.63■□□□□ 0.41
SDR39U1-213ENST00000555561 PBRM1Q86U86 1689 aa17.62■□□□□ 0.41
SDR39U1-213ENST00000555561 EIF4G3O43432 1585 aaKnown RBP17.61■□□□□ 0.41
SDR39U1-213ENST00000555561 FMN1Q68DA7 1419 aa17.59■□□□□ 0.41
SDR39U1-213ENST00000555561 FYCO1Q9BQS8 1478 aa17.57■□□□□ 0.4
SDR39U1-213ENST00000555561 TDRD9Q8NDG6 1382 aaKnown RBP17.57■□□□□ 0.4
SDR39U1-213ENST00000555561 ADAMTS12P58397 1594 aa17.57■□□□□ 0.4
SDR39U1-213ENST00000555561 SAMD9Q5K651 1589 aa17.55■□□□□ 0.4
SDR39U1-213ENST00000555561 TIAM1Q13009 1591 aa17.53■□□□□ 0.4
SDR39U1-213ENST00000555561 CFAP43Q8NDM7 1665 aa17.52■□□□□ 0.4
SDR39U1-213ENST00000555561 CASKIN1Q8WXD9 1431 aa17.52■□□□□ 0.4
SDR39U1-213ENST00000555561 MAGI1Q96QZ7 1491 aaPredicted RBP17.5■□□□□ 0.39
SDR39U1-213ENST00000555561 RRBP1Q9P2E9 1410 aaKnown RBP17.49■□□□□ 0.39
SDR39U1-213ENST00000555561 IQGAP2Q13576 1575 aa17.47■□□□□ 0.39
SDR39U1-213ENST00000555561 FBLN2P98095 1184 aa17.46■□□□□ 0.39
SDR39U1-213ENST00000555561 RIMBP3CA6NJZ7 1639 aa17.45■□□□□ 0.38
SDR39U1-213ENST00000555561 RIMBP3BA6NNM3 1639 aa17.45■□□□□ 0.38
SDR39U1-213ENST00000555561 RIMBP3Q9UFD9 1639 aa17.45■□□□□ 0.38
SDR39U1-213ENST00000555561 ARHGEF11O15085 1522 aa17.44■□□□□ 0.38
SDR39U1-213ENST00000555561 PPARGC1BQ86YN6 1023 aaKnown RBP17.44■□□□□ 0.38
SDR39U1-213ENST00000555561 PCF11O94913 1555 aaKnown RBP17.44■□□□□ 0.38
SDR39U1-213ENST00000555561 CHD1O14646 1710 aa17.43■□□□□ 0.38
SDR39U1-213ENST00000555561 LRRC9Q6ZRR7 1453 aa17.43■□□□□ 0.38
SDR39U1-213ENST00000555561 UGGT2Q9NYU1 1516 aa17.42■□□□□ 0.38
SDR39U1-213ENST00000555561 KIAA0586Q9BVV6 1533 aa17.42■□□□□ 0.38
SDR39U1-213ENST00000555561 RANGAP1P46060 587 aaPredicted RBP17.41■□□□□ 0.38
SDR39U1-213ENST00000555561 SNAPC4Q5SXM2 1469 aa17.41■□□□□ 0.38
SDR39U1-213ENST00000555561 CCDC18Q5T9S5 1454 aa17.4■□□□□ 0.38
SDR39U1-213ENST00000555561 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.4■□□□□ 0.38
SDR39U1-213ENST00000555561 CLSPNQ9HAW4 1339 aa17.39■□□□□ 0.37
SDR39U1-213ENST00000555561 FHOD3Q2V2M9 1422 aa17.38■□□□□ 0.37
SDR39U1-213ENST00000555561 SYNJ2O15056 1496 aa17.37■□□□□ 0.37
SDR39U1-213ENST00000555561 GRIN2AQ12879 1464 aa17.37■□□□□ 0.37
SDR39U1-213ENST00000555561 CHMP7Q8WUX9 453 aaPredicted RBP17.37■□□□□ 0.37
SDR39U1-213ENST00000555561 CCER1Q8TC90 406 aaPredicted RBP17.36■□□□□ 0.37
SDR39U1-213ENST00000555561 CCNB3Q8WWL7 1395 aa17.36■□□□□ 0.37
SDR39U1-213ENST00000555561 HECW1Q76N89 1606 aa17.34■□□□□ 0.37
SDR39U1-213ENST00000555561 CYB5RLQ6IPT4 315 aa17.33■□□□□ 0.36
SDR39U1-213ENST00000555561 KANK4Q5T7N3 995 aaPredicted RBP17.31■□□□□ 0.36
SDR39U1-213ENST00000555561 EHBP1L1Q8N3D4 1523 aa17.31■□□□□ 0.36
SDR39U1-213ENST00000555561 CLASP1Q7Z460 1538 aa17.28■□□□□ 0.36
SDR39U1-213ENST00000555561 NUP160Q12769 1436 aa17.27■□□□□ 0.35
SDR39U1-213ENST00000555561 KIAA0556O60303 1618 aa17.25■□□□□ 0.35
SDR39U1-213ENST00000555561 TTBK1Q5TCY1 1321 aaPredicted RBP17.25■□□□□ 0.35
SDR39U1-213ENST00000555561 SUPT6HQ7KZ85 1726 aaKnown RBP17.24■□□□□ 0.35
SDR39U1-213ENST00000555561 MTUS2Q5JR59 1369 aa17.23■□□□□ 0.35
SDR39U1-213ENST00000555561 CARMIL2Q6F5E8 1435 aa17.22■□□□□ 0.35
SDR39U1-213ENST00000555561 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.21■□□□□ 0.35
SDR39U1-213ENST00000555561 ACIN1Q9UKV3 1341 aaKnown RBP17.2■□□□□ 0.34
SDR39U1-213ENST00000555561 DISP1Q96F81 1524 aa17.18■□□□□ 0.34
SDR39U1-213ENST00000555561 P3H3Q8IVL6 736 aa17.18■□□□□ 0.34
SDR39U1-213ENST00000555561 HNRNPUL2Q1KMD3 747 aaKnown RBP17.17■□□□□ 0.34
SDR39U1-213ENST00000555561 EPRSP07814 1512 aaKnown RBP17.16■□□□□ 0.34
SDR39U1-213ENST00000555561 PHLDB1Q86UU1 1377 aa17.16■□□□□ 0.34
SDR39U1-213ENST00000555561 CEP170Q5SW79 1584 aa17.16■□□□□ 0.34
SDR39U1-213ENST00000555561 FGD6Q6ZV73 1430 aa17.15■□□□□ 0.34
SDR39U1-213ENST00000555561 MYOM3Q5VTT5 1437 aa17.14■□□□□ 0.33
SDR39U1-213ENST00000555561 RAPGEF6Q8TEU7 1601 aa17.14■□□□□ 0.33
SDR39U1-213ENST00000555561 MIA2Q96PC5 1412 aa17.13■□□□□ 0.33
SDR39U1-213ENST00000555561 LRRIQ1Q96JM4 1722 aa17.13■□□□□ 0.33
SDR39U1-213ENST00000555561 NCOA2Q15596 1464 aa17.12■□□□□ 0.33
SDR39U1-213ENST00000555561 CDK11AQ9UQ88 783 aaPredicted RBP17.12■□□□□ 0.33
SDR39U1-213ENST00000555561 ATP1B4Q9UN42 357 aaPredicted RBP17.1■□□□□ 0.33
SDR39U1-213ENST00000555561 SETD5Q9C0A6 1442 aa17.09■□□□□ 0.33
SDR39U1-213ENST00000555561 TCOF1Q13428 1488 aaKnown RBP17.09■□□□□ 0.33
SDR39U1-213ENST00000555561 AKNAQ7Z591 1439 aa17.08■□□□□ 0.32
SDR39U1-213ENST00000555561 TRHP20396 242 aaPredicted RBP17.08■□□□□ 0.32
SDR39U1-213ENST00000555561 DHX57Q6P158 1386 aaKnown RBP17.05■□□□□ 0.32
SDR39U1-213ENST00000555561 NUP153P49790 1475 aaKnown RBP17.04■□□□□ 0.32
SDR39U1-213ENST00000555561 JPH4Q96JJ6 628 aa17.03■□□□□ 0.32
SDR39U1-213ENST00000555561 ADCY10Q96PN6 1610 aa17.02■□□□□ 0.31
SDR39U1-213ENST00000555561 PTPN23Q9H3S7 1636 aa17.02■□□□□ 0.31
SDR39U1-213ENST00000555561 ERCC6L2Q5T890 1561 aa17.02■□□□□ 0.31
SDR39U1-213ENST00000555561 HFM1A2PYH4 1435 aa17.01■□□□□ 0.31
SDR39U1-213ENST00000555561 SHROOM2Q13796 1616 aa17■□□□□ 0.31
SDR39U1-213ENST00000555561 ITSN2Q9NZM3 1697 aa17■□□□□ 0.31
SDR39U1-213ENST00000555561 RAB3GAP2Q9H2M9 1393 aa17■□□□□ 0.31
SDR39U1-213ENST00000555561 ABCA8O94911 1581 aa16.99■□□□□ 0.31
SDR39U1-213ENST00000555561 TROQ12816 1431 aaPredicted RBP16.99■□□□□ 0.31
SDR39U1-213ENST00000555561 TIMELESSQ9UNS1 1208 aa16.99■□□□□ 0.31
SDR39U1-213ENST00000555561 MAGI3Q5TCQ9 1506 aa16.99■□□□□ 0.31
SDR39U1-213ENST00000555561 FAM50AQ14320 339 aaKnown RBP16.98■□□□□ 0.31
SDR39U1-213ENST00000555561 CDK13Q14004 1512 aaKnown RBP16.96■□□□□ 0.31
SDR39U1-213ENST00000555561 PRG4Q92954 1404 aaPredicted RBP16.95■□□□□ 0.3
SDR39U1-213ENST00000555561 GCC2Q8IWJ2 1684 aa16.91■□□□□ 0.3
SDR39U1-213ENST00000555561 ROCK1Q13464 1354 aa16.91■□□□□ 0.3
SDR39U1-213ENST00000555561 KIF14Q15058 1648 aa16.89■□□□□ 0.29
SDR39U1-213ENST00000555561 UACAQ9BZF9 1416 aa16.89■□□□□ 0.29
SDR39U1-213ENST00000555561 PLB1Q6P1J6 1458 aa16.88■□□□□ 0.29
SDR39U1-213ENST00000555561 DNMT1P26358 1616 aaKnown RBP16.88■□□□□ 0.29
SDR39U1-213ENST00000555561 PTPRGP23470 1445 aa16.87■□□□□ 0.29
SDR39U1-213ENST00000555561 NAIPQ13075 1403 aa16.86■□□□□ 0.29
SDR39U1-213ENST00000555561 ZNF316A6NFI3 1004 aaPredicted RBP16.85■□□□□ 0.29
SDR39U1-213ENST00000555561 MAPKBP1O60336 1514 aa16.85■□□□□ 0.29
SDR39U1-213ENST00000555561 ITGAEP38570 1179 aa16.84■□□□□ 0.29
SDR39U1-213ENST00000555561 UHRF1BP1LA0JNW5 1464 aa16.82■□□□□ 0.28
SDR39U1-213ENST00000555561 PLEKHD1A6NEE1 506 aa16.82■□□□□ 0.28
SDR39U1-213ENST00000555561 ATP10BO94823 1461 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms