RNA–Protein interactions for RNA: ENST00000555414.5

APEX1-210, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APEX1, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-210ENST00000555414 NUP160Q12769 1436 aa18.56■□□□□ 0.56
APEX1-210ENST00000555414 CHD1O14646 1710 aa18.53■□□□□ 0.56
APEX1-210ENST00000555414 RANGAP1P46060 587 aaPredicted RBP18.53■□□□□ 0.56
APEX1-210ENST00000555414 CTTNBP2Q8WZ74 1663 aa18.53■□□□□ 0.56
APEX1-210ENST00000555414 CEP162Q5TB80 1403 aa18.52■□□□□ 0.56
APEX1-210ENST00000555414 OSCARQ8IYS5 282 aa18.52■□□□□ 0.56
APEX1-210ENST00000555414 CLIP1P30622 1438 aa18.51■□□□□ 0.55
APEX1-210ENST00000555414 IQGAP2Q13576 1575 aa18.5■□□□□ 0.55
APEX1-210ENST00000555414 CEP170Q5SW79 1584 aa18.5■□□□□ 0.55
APEX1-210ENST00000555414 JPH4Q96JJ6 628 aa18.47■□□□□ 0.55
APEX1-210ENST00000555414 EFCAB5A4FU69 1503 aa18.42■□□□□ 0.54
APEX1-210ENST00000555414 UGGT2Q9NYU1 1516 aa18.42■□□□□ 0.54
APEX1-210ENST00000555414 CARMIL2Q6F5E8 1435 aa18.41■□□□□ 0.54
APEX1-210ENST00000555414 ARHGAP35Q9NRY4 1499 aa18.38■□□□□ 0.53
APEX1-210ENST00000555414 CLASP1Q7Z460 1538 aa18.37■□□□□ 0.53
APEX1-210ENST00000555414 P3H3Q8IVL6 736 aa18.36■□□□□ 0.53
APEX1-210ENST00000555414 PRG4Q92954 1404 aaPredicted RBP18.34■□□□□ 0.53
APEX1-210ENST00000555414 SAMD9Q5K651 1589 aa18.33■□□□□ 0.53
APEX1-210ENST00000555414 DISP1Q96F81 1524 aa18.31■□□□□ 0.52
APEX1-210ENST00000555414 SHROOM2Q13796 1616 aa18.3■□□□□ 0.52
APEX1-210ENST00000555414 FMN1Q68DA7 1419 aa18.3■□□□□ 0.52
APEX1-210ENST00000555414 ARAP1Q96P48 1450 aa18.3■□□□□ 0.52
APEX1-210ENST00000555414 FHOD3Q2V2M9 1422 aa18.28■□□□□ 0.52
APEX1-210ENST00000555414 KIAA0556O60303 1618 aa18.28■□□□□ 0.52
APEX1-210ENST00000555414 VPS8Q8N3P4 1428 aa18.28■□□□□ 0.52
APEX1-210ENST00000555414 APLP2Q06481 763 aa18.25■□□□□ 0.51
APEX1-210ENST00000555414 PTPRGP23470 1445 aa18.23■□□□□ 0.51
APEX1-210ENST00000555414 TTBK1Q5TCY1 1321 aaPredicted RBP18.23■□□□□ 0.51
APEX1-210ENST00000555414 ATP1B4Q9UN42 357 aaPredicted RBP18.2■□□□□ 0.5
APEX1-210ENST00000555414 CASKIN1Q8WXD9 1431 aa18.18■□□□□ 0.5
APEX1-210ENST00000555414 FYCO1Q9BQS8 1478 aa18.15■□□□□ 0.5
APEX1-210ENST00000555414 ERCC6L2Q5T890 1561 aa18.13■□□□□ 0.49
APEX1-210ENST00000555414 UACAQ9BZF9 1416 aa18.09■□□□□ 0.49
APEX1-210ENST00000555414 ARHGEF11O15085 1522 aa18.09■□□□□ 0.49
APEX1-210ENST00000555414 PCF11O94913 1555 aaKnown RBP18.09■□□□□ 0.49
APEX1-210ENST00000555414 HECW1Q76N89 1606 aa18.08■□□□□ 0.49
APEX1-210ENST00000555414 RAPGEF6Q8TEU7 1601 aa18.08■□□□□ 0.48
APEX1-210ENST00000555414 PLB1Q6P1J6 1458 aa18.07■□□□□ 0.48
APEX1-210ENST00000555414 CCDC18Q5T9S5 1454 aa18.07■□□□□ 0.48
APEX1-210ENST00000555414 MAP3K1Q13233 1512 aa18.06■□□□□ 0.48
APEX1-210ENST00000555414 ABCA8O94911 1581 aa18.06■□□□□ 0.48
APEX1-210ENST00000555414 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.06■□□□□ 0.48
APEX1-210ENST00000555414 HNRNPUL2Q1KMD3 747 aaKnown RBP18.06■□□□□ 0.48
APEX1-210ENST00000555414 CDK11AQ9UQ88 783 aaPredicted RBP18.06■□□□□ 0.48
APEX1-210ENST00000555414 UHRF1BP1LA0JNW5 1464 aa18.03■□□□□ 0.48
APEX1-210ENST00000555414 NUP153P49790 1475 aaKnown RBP18.02■□□□□ 0.48
APEX1-210ENST00000555414 EPRSP07814 1512 aaKnown RBP18.01■□□□□ 0.47
APEX1-210ENST00000555414 NPM1P06748 294 aaKnown RBP eCLIP18.01■□□□□ 0.47
APEX1-210ENST00000555414 ABCC2Q92887 1545 aa18.01■□□□□ 0.47
APEX1-210ENST00000555414 RIMBP3CA6NJZ7 1639 aa18■□□□□ 0.47
APEX1-210ENST00000555414 RIMBP3BA6NNM3 1639 aa18■□□□□ 0.47
APEX1-210ENST00000555414 RIMBP3Q9UFD9 1639 aa18■□□□□ 0.47
APEX1-210ENST00000555414 CYB5RLQ6IPT4 315 aa17.99■□□□□ 0.47
APEX1-210ENST00000555414 ARID3CA6NKF2 412 aa17.98■□□□□ 0.47
APEX1-210ENST00000555414 TIAM1Q13009 1591 aa17.98■□□□□ 0.47
APEX1-210ENST00000555414 PLEKHD1A6NEE1 506 aa17.97■□□□□ 0.47
APEX1-210ENST00000555414 MTUS2Q5JR59 1369 aa17.96■□□□□ 0.47
APEX1-210ENST00000555414 ATP10BO94823 1461 aa17.94■□□□□ 0.46
APEX1-210ENST00000555414 PPARGC1BQ86YN6 1023 aaKnown RBP17.94■□□□□ 0.46
APEX1-210ENST00000555414 LRRC9Q6ZRR7 1453 aa17.94■□□□□ 0.46
APEX1-210ENST00000555414 CFAP43Q8NDM7 1665 aa17.93■□□□□ 0.46
APEX1-210ENST00000555414 KANK4Q5T7N3 995 aaPredicted RBP17.93■□□□□ 0.46
APEX1-210ENST00000555414 DNAJC5Q9H3Z4 198 aa17.93■□□□□ 0.46
APEX1-210ENST00000555414 CDK13Q14004 1512 aaKnown RBP17.92■□□□□ 0.46
APEX1-210ENST00000555414 KDM5BQ9UGL1 1544 aa17.92■□□□□ 0.46
APEX1-210ENST00000555414 ADCY10Q96PN6 1610 aa17.89■□□□□ 0.46
APEX1-210ENST00000555414 LRRIQ1Q96JM4 1722 aa17.88■□□□□ 0.45
APEX1-210ENST00000555414 EHBP1L1Q8N3D4 1523 aa17.87■□□□□ 0.45
APEX1-210ENST00000555414 TROQ12816 1431 aaPredicted RBP17.86■□□□□ 0.45
APEX1-210ENST00000555414 ZCCHC11Q5TAX3 1644 aaKnown RBP17.84■□□□□ 0.45
APEX1-210ENST00000555414 SUPT6HQ7KZ85 1726 aaKnown RBP17.8■□□□□ 0.44
APEX1-210ENST00000555414 MAGI3Q5TCQ9 1506 aa17.79■□□□□ 0.44
APEX1-210ENST00000555414 KCNH8Q96L42 1107 aa17.79■□□□□ 0.44
APEX1-210ENST00000555414 NCOA2Q15596 1464 aa17.78■□□□□ 0.44
APEX1-210ENST00000555414 WDR7Q9Y4E6 1490 aa17.78■□□□□ 0.44
APEX1-210ENST00000555414 ASXL2Q76L83 1435 aa17.78■□□□□ 0.44
APEX1-210ENST00000555414 TRIM26Q12899 539 aaPredicted RBP17.78■□□□□ 0.44
APEX1-210ENST00000555414 CCNB3Q8WWL7 1395 aa17.76■□□□□ 0.43
APEX1-210ENST00000555414 KIF14Q15058 1648 aa17.76■□□□□ 0.43
APEX1-210ENST00000555414 MAPKBP1O60336 1514 aa17.73■□□□□ 0.43
APEX1-210ENST00000555414 PHLDB1Q86UU1 1377 aa17.71■□□□□ 0.43
APEX1-210ENST00000555414 MYOM3Q5VTT5 1437 aa17.71■□□□□ 0.43
APEX1-210ENST00000555414 CFDP1Q9UEE9 299 aaPredicted RBP17.69■□□□□ 0.42
APEX1-210ENST00000555414 MIA2Q96PC5 1412 aa17.68■□□□□ 0.42
APEX1-210ENST00000555414 ABCC10Q5T3U5 1492 aa17.67■□□□□ 0.42
APEX1-210ENST00000555414 FGD6Q6ZV73 1430 aa17.66■□□□□ 0.42
APEX1-210ENST00000555414 RRBP1Q9P2E9 1410 aaKnown RBP17.66■□□□□ 0.42
APEX1-210ENST00000555414 FAM50AQ14320 339 aaKnown RBP17.65■□□□□ 0.42
APEX1-210ENST00000555414 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.65■□□□□ 0.421e-5■■■■□ 25.8
APEX1-210ENST00000555414 GPATCH8Q9UKJ3 1502 aaKnown RBP17.65■□□□□ 0.42
APEX1-210ENST00000555414 ITSN2Q9NZM3 1697 aa17.63■□□□□ 0.41
APEX1-210ENST00000555414 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.63■□□□□ 0.41
APEX1-210ENST00000555414 EFCAB2Q5VUJ9 269 aa17.63■□□□□ 0.41
APEX1-210ENST00000555414 FAM69CQ0P6D2 419 aa17.62■□□□□ 0.41
APEX1-210ENST00000555414 PLCH2O75038 1416 aa17.61■□□□□ 0.41
APEX1-210ENST00000555414 ZNF777Q9ULD5 760 aaPredicted RBP17.61■□□□□ 0.41
APEX1-210ENST00000555414 ABCA9Q8IUA7 1624 aa17.61■□□□□ 0.41
APEX1-210ENST00000555414 CD109Q6YHK3 1445 aa17.6■□□□□ 0.41
APEX1-210ENST00000555414 PCGF6Q9BYE7 350 aa17.59■□□□□ 0.41
APEX1-210ENST00000555414 TTC37Q6PGP7 1564 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms