RNA–Protein interactions for RNA: ENST00000555358.5

STRN3-207, Transcript of striatin 3, humanhuman

TSL 1 (best)

Gene STRN3, Length 2,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-207ENST00000555358 ARHGAP35Q9NRY4 1499 aa36.09■■■■□ 3.37
STRN3-207ENST00000555358 TTBK1Q5TCY1 1321 aaPredicted RBP36.05■■■■□ 3.36
STRN3-207ENST00000555358 GRIN2BQ13224 1484 aa36.01■■■■□ 3.36
STRN3-207ENST00000555358 CTTNBP2Q8WZ74 1663 aa36.01■■■■□ 3.35
STRN3-207ENST00000555358 SCAF1Q9H7N4 1312 aaKnown RBP36.01■■■■□ 3.35
STRN3-207ENST00000555358 EIF4G3O43432 1585 aaKnown RBP35.98■■■■□ 3.35
STRN3-207ENST00000555358 ADAMTS12P58397 1594 aa35.95■■■■□ 3.34
STRN3-207ENST00000555358 FHAD1B1AJZ9 1412 aa35.93■■■■□ 3.34
STRN3-207ENST00000555358 SNAPC4Q5SXM2 1469 aa35.82■■■■□ 3.33
STRN3-207ENST00000555358 APLP2Q06481 763 aa35.8■■■■□ 3.32
STRN3-207ENST00000555358 P3H3Q8IVL6 736 aa35.8■■■■□ 3.32
STRN3-207ENST00000555358 EFCAB5A4FU69 1503 aa35.73■■■■□ 3.31
STRN3-207ENST00000555358 FHOD3Q2V2M9 1422 aa35.71■■■■□ 3.31
STRN3-207ENST00000555358 MAGI1Q96QZ7 1491 aaPredicted RBP35.65■■■■□ 3.3
STRN3-207ENST00000555358 DIEXFQ68CQ4 756 aaKnown RBP35.64■■■■□ 3.3
STRN3-207ENST00000555358 SAMD9Q5K651 1589 aa35.62■■■■□ 3.29
STRN3-207ENST00000555358 GRIN2AQ12879 1464 aa35.61■■■■□ 3.29
STRN3-207ENST00000555358 IQGAP2Q13576 1575 aa35.59■■■■□ 3.29
STRN3-207ENST00000555358 KANK4Q5T7N3 995 aaPredicted RBP35.59■■■■□ 3.29
STRN3-207ENST00000555358 ACIN1Q9UKV3 1341 aaKnown RBP35.58■■■■□ 3.29
STRN3-207ENST00000555358 PELP1Q8IZL8 1130 aaKnown RBP35.58■■■■□ 3.29
STRN3-207ENST00000555358 PCF11O94913 1555 aaKnown RBP35.56■■■■□ 3.28
STRN3-207ENST00000555358 SYNJ2O15056 1496 aa35.55■■■■□ 3.28
STRN3-207ENST00000555358 CHMP7Q8WUX9 453 aaPredicted RBP35.52■■■■□ 3.28
STRN3-207ENST00000555358 FBLN2P98095 1184 aa35.5■■■■□ 3.27
STRN3-207ENST00000555358 NEUROD1Q13562 356 aa35.48■■■■□ 3.27
STRN3-207ENST00000555358 KIAA0586Q9BVV6 1533 aa35.45■■■■□ 3.27
STRN3-207ENST00000555358 TIAM1Q13009 1591 aa35.45■■■■□ 3.27
STRN3-207ENST00000555358 FMN1Q68DA7 1419 aa35.43■■■■□ 3.26
STRN3-207ENST00000555358 CEP170Q5SW79 1584 aa35.43■■■■□ 3.26
STRN3-207ENST00000555358 ATP1B4Q9UN42 357 aaPredicted RBP35.43■■■■□ 3.26
STRN3-207ENST00000555358 CASKIN1Q8WXD9 1431 aa35.41■■■■□ 3.26
STRN3-207ENST00000555358 FYCO1Q9BQS8 1478 aa35.41■■■■□ 3.26
STRN3-207ENST00000555358 MAP3K1Q13233 1512 aa35.4■■■■□ 3.26
STRN3-207ENST00000555358 UGGT2Q9NYU1 1516 aa35.39■■■■□ 3.26
STRN3-207ENST00000555358 CFAP43Q8NDM7 1665 aa35.34■■■■□ 3.25
STRN3-207ENST00000555358 ZNF316A6NFI3 1004 aaPredicted RBP35.34■■■■□ 3.25
STRN3-207ENST00000555358 NUP160Q12769 1436 aa35.31■■■■□ 3.24
STRN3-207ENST00000555358 LRRC9Q6ZRR7 1453 aa35.29■■■■□ 3.24
STRN3-207ENST00000555358 CENPBP07199 599 aaPredicted RBP35.28■■■■□ 3.24
STRN3-207ENST00000555358 DISP1Q96F81 1524 aa35.27■■■■□ 3.24
STRN3-207ENST00000555358 LRRIQ1Q96JM4 1722 aa35.26■■■■□ 3.24
STRN3-207ENST00000555358 HNRNPUL2Q1KMD3 747 aaKnown RBP35.24■■■■□ 3.23
STRN3-207ENST00000555358 KIAA0556O60303 1618 aa35.24■■■■□ 3.23
STRN3-207ENST00000555358 CHD1O14646 1710 aa35.2■■■■□ 3.22
STRN3-207ENST00000555358 JPH4Q96JJ6 628 aa35.12■■■■□ 3.21
STRN3-207ENST00000555358 GTF3C3Q9Y5Q9 886 aa35.12■■■■□ 3.21
STRN3-207ENST00000555358 RRBP1Q9P2E9 1410 aaKnown RBP35.11■■■■□ 3.21
STRN3-207ENST00000555358 HECW1Q76N89 1606 aa35.06■■■■□ 3.2
STRN3-207ENST00000555358 PHLDB1Q86UU1 1377 aa35.05■■■■□ 3.2
STRN3-207ENST00000555358 CCNB3Q8WWL7 1395 aa35.01■■■■□ 3.19
STRN3-207ENST00000555358 MTUS2Q5JR59 1369 aa34.98■■■■□ 3.19
STRN3-207ENST00000555358 CARMIL2Q6F5E8 1435 aa34.98■■■■□ 3.19
STRN3-207ENST00000555358 CCDC18Q5T9S5 1454 aa34.98■■■■□ 3.19
STRN3-207ENST00000555358 EPRSP07814 1512 aaKnown RBP34.97■■■■□ 3.19
STRN3-207ENST00000555358 ARID3CA6NKF2 412 aa34.96■■■■□ 3.19
STRN3-207ENST00000555358 CDK13Q14004 1512 aaKnown RBP34.95■■■■□ 3.19
STRN3-207ENST00000555358 MAGI3Q5TCQ9 1506 aa34.94■■■■□ 3.18
STRN3-207ENST00000555358 RAPGEF6Q8TEU7 1601 aa34.93■■■■□ 3.18
STRN3-207ENST00000555358 NUP153P49790 1475 aaKnown RBP34.88■■■■□ 3.17
STRN3-207ENST00000555358 EHBP1L1Q8N3D4 1523 aa34.87■■■■□ 3.17
STRN3-207ENST00000555358 PRG4Q92954 1404 aaPredicted RBP34.87■■■■□ 3.17
STRN3-207ENST00000555358 PLB1Q6P1J6 1458 aa34.87■■■■□ 3.17
STRN3-207ENST00000555358 MIER1Q8N108 512 aa34.85■■■■□ 3.17
STRN3-207ENST00000555358 SUPT6HQ7KZ85 1726 aaKnown RBP34.82■■■■□ 3.16
STRN3-207ENST00000555358 NCOA2Q15596 1464 aa34.82■■■■□ 3.16
STRN3-207ENST00000555358 ITGAEP38570 1179 aa34.81■■■■□ 3.16
STRN3-207ENST00000555358 SHROOM2Q13796 1616 aa34.8■■■■□ 3.16
STRN3-207ENST00000555358 CLSPNQ9HAW4 1339 aa34.78■■■■□ 3.16
STRN3-207ENST00000555358 FAM50AQ14320 339 aaKnown RBP34.77■■■■□ 3.16
STRN3-207ENST00000555358 DHX57Q6P158 1386 aaKnown RBP34.76■■■■□ 3.15
STRN3-207ENST00000555358 YTHDC1Q96MU7 727 aaKnown RBP34.73■■■■□ 3.15
STRN3-207ENST00000555358 FGD6Q6ZV73 1430 aa34.72■■■■□ 3.15
STRN3-207ENST00000555358 ARHGEF11O15085 1522 aa34.72■■■■□ 3.15
STRN3-207ENST00000555358 CLASP1Q7Z460 1538 aa34.71■■■■□ 3.15
STRN3-207ENST00000555358 ABCA8O94911 1581 aa34.7■■■■□ 3.15
STRN3-207ENST00000555358 ERCC6L2Q5T890 1561 aa34.69■■■■□ 3.14
STRN3-207ENST00000555358 MYOM3Q5VTT5 1437 aa34.67■■■■□ 3.14
STRN3-207ENST00000555358 PTPRGP23470 1445 aa34.66■■■■□ 3.14
STRN3-207ENST00000555358 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.59■■■■□ 3.133e-7■□□□□ 8.2
STRN3-207ENST00000555358 CDK11AQ9UQ88 783 aaPredicted RBP34.57■■■■□ 3.12
STRN3-207ENST00000555358 ATP10BO94823 1461 aa34.53■■■■□ 3.12
STRN3-207ENST00000555358 PTPN23Q9H3S7 1636 aa34.53■■■■□ 3.12
STRN3-207ENST00000555358 TROQ12816 1431 aaPredicted RBP34.51■■■■□ 3.11
STRN3-207ENST00000555358 UACAQ9BZF9 1416 aa34.45■■■■□ 3.11
STRN3-207ENST00000555358 KIF14Q15058 1648 aa34.44■■■■□ 3.1
STRN3-207ENST00000555358 RAB3GAP2Q9H2M9 1393 aa34.43■■■■□ 3.1
STRN3-207ENST00000555358 PTPRKQ15262 1439 aa34.42■■■■□ 3.1
STRN3-207ENST00000555358 TCOF1Q13428 1488 aaKnown RBP34.41■■■■□ 3.1
STRN3-207ENST00000555358 ADCY10Q96PN6 1610 aa34.4■■■■□ 3.1
STRN3-207ENST00000555358 SETD5Q9C0A6 1442 aa34.4■■■■□ 3.1
STRN3-207ENST00000555358 MIA2Q96PC5 1412 aa34.39■■■■□ 3.1
STRN3-207ENST00000555358 PLEKHD1A6NEE1 506 aa34.37■■■■□ 3.09
STRN3-207ENST00000555358 ABCC2Q92887 1545 aa34.33■■■■□ 3.09
STRN3-207ENST00000555358 OSCARQ8IYS5 282 aa34.28■■■■□ 3.08
STRN3-207ENST00000555358 GPATCH8Q9UKJ3 1502 aaKnown RBP34.27■■■■□ 3.08
STRN3-207ENST00000555358 ZNF644Q9H582 1327 aaPredicted RBP34.26■■■■□ 3.08
STRN3-207ENST00000555358 ITSN2Q9NZM3 1697 aa34.25■■■■□ 3.07
STRN3-207ENST00000555358 ABCC10Q5T3U5 1492 aa34.22■■■■□ 3.07
STRN3-207ENST00000555358 CDC42BPAQ5VT25 1732 aa34.2■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms