RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 RAPGEF2Q9Y4G8 1499 aa20.3■□□□□ 0.84
SRP54-206ENST00000555317 KIAA0586Q9BVV6 1533 aa20.28■□□□□ 0.84
SRP54-206ENST00000555317 JPH4Q96JJ6 628 aa20.27■□□□□ 0.84
SRP54-206ENST00000555317 PRG4Q92954 1404 aaPredicted RBP20.26■□□□□ 0.83
SRP54-206ENST00000555317 ERCC6L2Q5T890 1561 aa20.25■□□□□ 0.83
SRP54-206ENST00000555317 CHIC1Q5VXU3 224 aa20.23■□□□□ 0.83
SRP54-206ENST00000555317 EEA1Q15075 1411 aa20.22■□□□□ 0.83
SRP54-206ENST00000555317 IQGAP2Q13576 1575 aa20.21■□□□□ 0.83
SRP54-206ENST00000555317 CSRNP3Q8WYN3 585 aa20.17■□□□□ 0.82
SRP54-206ENST00000555317 PRXQ9BXM0 1461 aa20.17■□□□□ 0.82
SRP54-206ENST00000555317 CTTNBP2Q8WZ74 1663 aa20.14■□□□□ 0.81
SRP54-206ENST00000555317 FAM9AQ8IZU1 332 aaPredicted RBP20.13■□□□□ 0.81
SRP54-206ENST00000555317 CARMIL2Q6F5E8 1435 aa20.12■□□□□ 0.81
SRP54-206ENST00000555317 UGGT2Q9NYU1 1516 aa20.05■□□□□ 0.8
SRP54-206ENST00000555317 TTBK1Q5TCY1 1321 aaPredicted RBP20.03■□□□□ 0.8
SRP54-206ENST00000555317 TRHP20396 242 aaPredicted RBP20.03■□□□□ 0.8
SRP54-206ENST00000555317 TNIKQ9UKE5 1360 aa20.03■□□□□ 0.8
SRP54-206ENST00000555317 PTPRGP23470 1445 aa20.02■□□□□ 0.79
SRP54-206ENST00000555317 KIF21BO75037 1637 aa20.01■□□□□ 0.79
SRP54-206ENST00000555317 GOLGA3Q08378 1498 aa20■□□□□ 0.79
SRP54-206ENST00000555317 KIAA0556O60303 1618 aa20■□□□□ 0.79
SRP54-206ENST00000555317 DISP1Q96F81 1524 aa20■□□□□ 0.79
SRP54-206ENST00000555317 NPM1P06748 294 aaKnown RBP eCLIP19.97■□□□□ 0.79
SRP54-206ENST00000555317 ADCY10Q96PN6 1610 aa19.95■□□□□ 0.78
SRP54-206ENST00000555317 EHMT2Q96KQ7 1210 aa19.9■□□□□ 0.78
SRP54-206ENST00000555317 UACAQ9BZF9 1416 aa19.88■□□□□ 0.77
SRP54-206ENST00000555317 UBTFP17480 764 aaKnown RBP19.88■□□□□ 0.77
SRP54-206ENST00000555317 RANGAP1P46060 587 aaPredicted RBP19.87■□□□□ 0.77
SRP54-206ENST00000555317 ABCC2Q92887 1545 aa19.86■□□□□ 0.77
SRP54-206ENST00000555317 UHRF1BP1LA0JNW5 1464 aa19.85■□□□□ 0.77
SRP54-206ENST00000555317 SAMD9Q5K651 1589 aa19.83■□□□□ 0.77
SRP54-206ENST00000555317 MAPKBP1O60336 1514 aa19.83■□□□□ 0.77
SRP54-206ENST00000555317 P3H3Q8IVL6 736 aa19.83■□□□□ 0.77
SRP54-206ENST00000555317 EFCAB5A4FU69 1503 aa19.78■□□□□ 0.76
SRP54-206ENST00000555317 PLB1Q6P1J6 1458 aa19.78■□□□□ 0.76
SRP54-206ENST00000555317 KIF13AQ9H1H9 1805 aa19.76■□□□□ 0.75
SRP54-206ENST00000555317 ABCA8O94911 1581 aa19.74■□□□□ 0.75
SRP54-206ENST00000555317 ZCCHC11Q5TAX3 1644 aaKnown RBP19.74■□□□□ 0.75
SRP54-206ENST00000555317 KDM5BQ9UGL1 1544 aa19.74■□□□□ 0.75
SRP54-206ENST00000555317 ABCC10Q5T3U5 1492 aa19.73■□□□□ 0.75
SRP54-206ENST00000555317 FAM69CQ0P6D2 419 aa19.73■□□□□ 0.75
SRP54-206ENST00000555317 FHOD3Q2V2M9 1422 aa19.73■□□□□ 0.75
SRP54-206ENST00000555317 ASXL2Q76L83 1435 aa19.72■□□□□ 0.75
SRP54-206ENST00000555317 DIP2BQ9P265 1576 aa19.71■□□□□ 0.75
SRP54-206ENST00000555317 RAPGEF6Q8TEU7 1601 aa19.69■□□□□ 0.74
SRP54-206ENST00000555317 ARID3CA6NKF2 412 aa19.64■□□□□ 0.73
SRP54-206ENST00000555317 WDR7Q9Y4E6 1490 aa19.63■□□□□ 0.73
SRP54-206ENST00000555317 TSPOAP1O95153 1857 aa19.62■□□□□ 0.73
SRP54-206ENST00000555317 ARHGAP35Q9NRY4 1499 aa19.61■□□□□ 0.73
SRP54-206ENST00000555317 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.61■□□□□ 0.73
SRP54-206ENST00000555317 HNRNPUL2Q1KMD3 747 aaKnown RBP19.61■□□□□ 0.73
SRP54-206ENST00000555317 FMN1Q68DA7 1419 aa19.6■□□□□ 0.73
SRP54-206ENST00000555317 GLI2P10070 1586 aa19.59■□□□□ 0.73
SRP54-206ENST00000555317 EPRSP07814 1512 aaKnown RBP19.59■□□□□ 0.73
SRP54-206ENST00000555317 ATP10BO94823 1461 aa19.57■□□□□ 0.72
SRP54-206ENST00000555317 NUP153P49790 1475 aaKnown RBP19.57■□□□□ 0.72
SRP54-206ENST00000555317 KCNH8Q96L42 1107 aa19.55■□□□□ 0.72
SRP54-206ENST00000555317 CLIP1P30622 1438 aa19.54■□□□□ 0.72
SRP54-206ENST00000555317 ATP1B4Q9UN42 357 aaPredicted RBP19.54■□□□□ 0.72
SRP54-206ENST00000555317 HECW1Q76N89 1606 aa19.53■□□□□ 0.72
SRP54-206ENST00000555317 MAP3K4Q9Y6R4 1608 aa19.51■□□□□ 0.71
SRP54-206ENST00000555317 CFAP43Q8NDM7 1665 aa19.49■□□□□ 0.71
SRP54-206ENST00000555317 TEX14Q8IWB6 1497 aa19.48■□□□□ 0.71
SRP54-206ENST00000555317 PLEKHD1A6NEE1 506 aa19.47■□□□□ 0.71
SRP54-206ENST00000555317 PPRC1Q5VV67 1664 aaKnown RBP19.46■□□□□ 0.71
SRP54-206ENST00000555317 CDK13Q14004 1512 aaKnown RBP19.46■□□□□ 0.71
SRP54-206ENST00000555317 KDM6BO15054 1643 aa19.45■□□□□ 0.7
SRP54-206ENST00000555317 CD109Q6YHK3 1445 aa19.44■□□□□ 0.7
SRP54-206ENST00000555317 CEP162Q5TB80 1403 aa19.43■□□□□ 0.7
SRP54-206ENST00000555317 PCF11O94913 1555 aaKnown RBP19.42■□□□□ 0.7
SRP54-206ENST00000555317 CDK11AQ9UQ88 783 aaPredicted RBP19.42■□□□□ 0.7
SRP54-206ENST00000555317 CASKIN1Q8WXD9 1431 aa19.41■□□□□ 0.7
SRP54-206ENST00000555317 ABCA9Q8IUA7 1624 aa19.4■□□□□ 0.7
SRP54-206ENST00000555317 LOC105371045A0A1W2PR82 267 aa19.4■□□□□ 0.7
SRP54-206ENST00000555317 FYCO1Q9BQS8 1478 aa19.39■□□□□ 0.69
SRP54-206ENST00000555317 MAGI3Q5TCQ9 1506 aa19.39■□□□□ 0.69
SRP54-206ENST00000555317 CCDC18Q5T9S5 1454 aa19.38■□□□□ 0.69
SRP54-206ENST00000555317 LRRIQ1Q96JM4 1722 aa19.35■□□□□ 0.69
SRP54-206ENST00000555317 KIF14Q15058 1648 aa19.31■□□□□ 0.68
SRP54-206ENST00000555317 TROQ12816 1431 aaPredicted RBP19.3■□□□□ 0.68
SRP54-206ENST00000555317 TTC37Q6PGP7 1564 aa19.3■□□□□ 0.68
SRP54-206ENST00000555317 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.3■□□□□ 0.681e-7■■□□□ 13.5
SRP54-206ENST00000555317 PHLDB1Q86UU1 1377 aa19.27■□□□□ 0.68
SRP54-206ENST00000555317 NEO1Q92859 1461 aa19.27■□□□□ 0.67
SRP54-206ENST00000555317 CFAP74Q9C0B2 1584 aa19.27■□□□□ 0.67
SRP54-206ENST00000555317 MYO5CQ9NQX4 1742 aa19.24■□□□□ 0.67
SRP54-206ENST00000555317 COL17A1Q9UMD9 1497 aaPredicted RBP19.23■□□□□ 0.67
SRP54-206ENST00000555317 FANCAO15360 1455 aa19.22■□□□□ 0.67
SRP54-206ENST00000555317 ARAP3Q8WWN8 1544 aa19.22■□□□□ 0.67
SRP54-206ENST00000555317 VPS8Q8N3P4 1428 aa19.2■□□□□ 0.66
SRP54-206ENST00000555317 MTUS2Q5JR59 1369 aa19.19■□□□□ 0.66
SRP54-206ENST00000555317 PLCH2O75038 1416 aa19.18■□□□□ 0.66
SRP54-206ENST00000555317 AKNAQ7Z591 1439 aa19.17■□□□□ 0.66
SRP54-206ENST00000555317 ARHGAP5Q13017 1502 aa19.16■□□□□ 0.66
SRP54-206ENST00000555317 EFCAB2Q5VUJ9 269 aa19.15■□□□□ 0.66
SRP54-206ENST00000555317 DENND4BO75064 1496 aaPredicted RBP19.14■□□□□ 0.65
SRP54-206ENST00000555317 ADGRL1O94910 1474 aa19.13■□□□□ 0.65
SRP54-206ENST00000555317 EHBP1L1Q8N3D4 1523 aa19.13■□□□□ 0.65
SRP54-206ENST00000555317 PREX2Q70Z35 1606 aa19.12■□□□□ 0.65
SRP54-206ENST00000555317 RAPGEF3O95398 923 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms