RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 CEP170Q5SW79 1584 aa21.1■□□□□ 0.97
TRAPPC6B-205ENST00000555269 ARAP1Q96P48 1450 aa21.09■□□□□ 0.97
TRAPPC6B-205ENST00000555269 CARMIL1Q5VZK9 1371 aa21.09■□□□□ 0.97
TRAPPC6B-205ENST00000555269 JPH4Q96JJ6 628 aa21.06■□□□□ 0.96
TRAPPC6B-205ENST00000555269 PPP6R1Q9UPN7 881 aa21.04■□□□□ 0.96
TRAPPC6B-205ENST00000555269 ADRA2BP18089 450 aa21■□□□□ 0.95
TRAPPC6B-205ENST00000555269 ERCC6L2Q5T890 1561 aa20.99■□□□□ 0.95
TRAPPC6B-205ENST00000555269 PRG4Q92954 1404 aaPredicted RBP20.95■□□□□ 0.95
TRAPPC6B-205ENST00000555269 CUL7Q14999 1698 aa20.95■□□□□ 0.94
TRAPPC6B-205ENST00000555269 KIAA0586Q9BVV6 1533 aa20.92■□□□□ 0.94
TRAPPC6B-205ENST00000555269 SHROOM2Q13796 1616 aa20.89■□□□□ 0.94
TRAPPC6B-205ENST00000555269 RAPGEF2Q9Y4G8 1499 aa20.88■□□□□ 0.93
TRAPPC6B-205ENST00000555269 FAM9AQ8IZU1 332 aaPredicted RBP20.87■□□□□ 0.93
TRAPPC6B-205ENST00000555269 CSRNP3Q8WYN3 585 aa20.86■□□□□ 0.93
TRAPPC6B-205ENST00000555269 TRHP20396 242 aaPredicted RBP20.85■□□□□ 0.93
TRAPPC6B-205ENST00000555269 TTBK1Q5TCY1 1321 aaPredicted RBP20.81■□□□□ 0.92
TRAPPC6B-205ENST00000555269 PRXQ9BXM0 1461 aa20.78■□□□□ 0.92
TRAPPC6B-205ENST00000555269 PIAS4Q8N2W9 510 aaPredicted RBP20.73■□□□□ 0.91
TRAPPC6B-205ENST00000555269 IQGAP2Q13576 1575 aa20.71■□□□□ 0.91
TRAPPC6B-205ENST00000555269 PTPRGP23470 1445 aa20.7■□□□□ 0.9
TRAPPC6B-205ENST00000555269 CARMIL2Q6F5E8 1435 aa20.7■□□□□ 0.9
TRAPPC6B-205ENST00000555269 TNIKQ9UKE5 1360 aa20.67■□□□□ 0.9
TRAPPC6B-205ENST00000555269 EEA1Q15075 1411 aa20.67■□□□□ 0.9
TRAPPC6B-205ENST00000555269 EHMT2Q96KQ7 1210 aa20.66■□□□□ 0.9
TRAPPC6B-205ENST00000555269 DISP1Q96F81 1524 aa20.65■□□□□ 0.9
TRAPPC6B-205ENST00000555269 NPM1P06748 294 aaKnown RBP eCLIP20.65■□□□□ 0.9
TRAPPC6B-205ENST00000555269 UGGT2Q9NYU1 1516 aa20.63■□□□□ 0.89
TRAPPC6B-205ENST00000555269 P3H3Q8IVL6 736 aa20.61■□□□□ 0.89
TRAPPC6B-205ENST00000555269 RANGAP1P46060 587 aaPredicted RBP20.6■□□□□ 0.89
TRAPPC6B-205ENST00000555269 ADCY10Q96PN6 1610 aa20.56■□□□□ 0.88
TRAPPC6B-205ENST00000555269 CTTNBP2Q8WZ74 1663 aa20.52■□□□□ 0.88
TRAPPC6B-205ENST00000555269 UACAQ9BZF9 1416 aa20.52■□□□□ 0.87
TRAPPC6B-205ENST00000555269 UBTFP17480 764 aaKnown RBP20.51■□□□□ 0.87
TRAPPC6B-205ENST00000555269 FAM69CQ0P6D2 419 aa20.51■□□□□ 0.87
TRAPPC6B-205ENST00000555269 KIAA0556O60303 1618 aa20.51■□□□□ 0.87
TRAPPC6B-205ENST00000555269 GOLGA3Q08378 1498 aa20.5■□□□□ 0.87
TRAPPC6B-205ENST00000555269 UHRF1BP1LA0JNW5 1464 aa20.45■□□□□ 0.86
TRAPPC6B-205ENST00000555269 PLB1Q6P1J6 1458 aa20.44■□□□□ 0.86
TRAPPC6B-205ENST00000555269 ABCC2Q92887 1545 aa20.44■□□□□ 0.86
TRAPPC6B-205ENST00000555269 KIF21BO75037 1637 aa20.43■□□□□ 0.86
TRAPPC6B-205ENST00000555269 ARID3CA6NKF2 412 aa20.41■□□□□ 0.86
TRAPPC6B-205ENST00000555269 MSH5O43196 834 aa20.41■□□□□ 0.86
TRAPPC6B-205ENST00000555269 ABCC10Q5T3U5 1492 aa20.41■□□□□ 0.86
TRAPPC6B-205ENST00000555269 MAPKBP1O60336 1514 aa20.41■□□□□ 0.86
TRAPPC6B-205ENST00000555269 ASXL2Q76L83 1435 aa20.38■□□□□ 0.85
TRAPPC6B-205ENST00000555269 KDM5BQ9UGL1 1544 aa20.37■□□□□ 0.85
TRAPPC6B-205ENST00000555269 FHOD3Q2V2M9 1422 aa20.34■□□□□ 0.85
TRAPPC6B-205ENST00000555269 ABCA8O94911 1581 aa20.33■□□□□ 0.84
TRAPPC6B-205ENST00000555269 SAMD9Q5K651 1589 aa20.33■□□□□ 0.84
TRAPPC6B-205ENST00000555269 KIF13AQ9H1H9 1805 aa20.32■□□□□ 0.84
TRAPPC6B-205ENST00000555269 KCNH8Q96L42 1107 aa20.32■□□□□ 0.84
TRAPPC6B-205ENST00000555269 DIP2BQ9P265 1576 aa20.29■□□□□ 0.84
TRAPPC6B-205ENST00000555269 ZCCHC11Q5TAX3 1644 aaKnown RBP20.27■□□□□ 0.84
TRAPPC6B-205ENST00000555269 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.27■□□□□ 0.84
TRAPPC6B-205ENST00000555269 HNRNPUL2Q1KMD3 747 aaKnown RBP20.27■□□□□ 0.84
TRAPPC6B-205ENST00000555269 ATP10BO94823 1461 aa20.26■□□□□ 0.83
TRAPPC6B-205ENST00000555269 EPRSP07814 1512 aaKnown RBP20.23■□□□□ 0.83
TRAPPC6B-205ENST00000555269 ATP1B4Q9UN42 357 aaPredicted RBP20.21■□□□□ 0.83
TRAPPC6B-205ENST00000555269 ARHGAP35Q9NRY4 1499 aa20.2■□□□□ 0.82
TRAPPC6B-205ENST00000555269 WDR7Q9Y4E6 1490 aa20.2■□□□□ 0.82
TRAPPC6B-205ENST00000555269 EFCAB5A4FU69 1503 aa20.19■□□□□ 0.82
TRAPPC6B-205ENST00000555269 TSPOAP1O95153 1857 aa20.18■□□□□ 0.82
TRAPPC6B-205ENST00000555269 NUP153P49790 1475 aaKnown RBP20.18■□□□□ 0.82
TRAPPC6B-205ENST00000555269 GLI2P10070 1586 aa20.17■□□□□ 0.82
TRAPPC6B-205ENST00000555269 RAPGEF6Q8TEU7 1601 aa20.17■□□□□ 0.82
TRAPPC6B-205ENST00000555269 LOC105371045A0A1W2PR82 267 aa20.17■□□□□ 0.82
TRAPPC6B-205ENST00000555269 PLEKHD1A6NEE1 506 aa20.13■□□□□ 0.81
TRAPPC6B-205ENST00000555269 CD109Q6YHK3 1445 aa20.1■□□□□ 0.81
TRAPPC6B-205ENST00000555269 FMN1Q68DA7 1419 aa20.09■□□□□ 0.81
TRAPPC6B-205ENST00000555269 CLIP1P30622 1438 aa20.06■□□□□ 0.8
TRAPPC6B-205ENST00000555269 PPRC1Q5VV67 1664 aaKnown RBP20.06■□□□□ 0.8
TRAPPC6B-205ENST00000555269 MAP3K4Q9Y6R4 1608 aa20.05■□□□□ 0.8
TRAPPC6B-205ENST00000555269 COL17A1Q9UMD9 1497 aaPredicted RBP20.05■□□□□ 0.8
TRAPPC6B-205ENST00000555269 CDK13Q14004 1512 aaKnown RBP20.02■□□□□ 0.8
TRAPPC6B-205ENST00000555269 KDM6BO15054 1643 aa20.01■□□□□ 0.79
TRAPPC6B-205ENST00000555269 TEX14Q8IWB6 1497 aa19.99■□□□□ 0.79
TRAPPC6B-205ENST00000555269 MAGI3Q5TCQ9 1506 aa19.99■□□□□ 0.79
TRAPPC6B-205ENST00000555269 CDK11AQ9UQ88 783 aaPredicted RBP19.97■□□□□ 0.79
TRAPPC6B-205ENST00000555269 CASKIN1Q8WXD9 1431 aa19.94■□□□□ 0.78
TRAPPC6B-205ENST00000555269 CFAP43Q8NDM7 1665 aa19.94■□□□□ 0.78
TRAPPC6B-205ENST00000555269 CEP162Q5TB80 1403 aa19.93■□□□□ 0.78
TRAPPC6B-205ENST00000555269 HECW1Q76N89 1606 aa19.93■□□□□ 0.78
TRAPPC6B-205ENST00000555269 ABCA9Q8IUA7 1624 aa19.92■□□□□ 0.78
TRAPPC6B-205ENST00000555269 RAPGEF3O95398 923 aa19.9■□□□□ 0.78
TRAPPC6B-205ENST00000555269 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.88■□□□□ 0.77
TRAPPC6B-205ENST00000555269 PCF11O94913 1555 aaKnown RBP19.87■□□□□ 0.77
TRAPPC6B-205ENST00000555269 TROQ12816 1431 aaPredicted RBP19.85■□□□□ 0.77
TRAPPC6B-205ENST00000555269 LRRIQ1Q96JM4 1722 aa19.85■□□□□ 0.77
TRAPPC6B-205ENST00000555269 PHLDB1Q86UU1 1377 aa19.84■□□□□ 0.77
TRAPPC6B-205ENST00000555269 ARAP3Q8WWN8 1544 aa19.83■□□□□ 0.77
TRAPPC6B-205ENST00000555269 FYCO1Q9BQS8 1478 aa19.83■□□□□ 0.76
TRAPPC6B-205ENST00000555269 KDM4FA0A1W2PPD8 638 aa19.82■□□□□ 0.76
TRAPPC6B-205ENST00000555269 PLCH2O75038 1416 aa19.82■□□□□ 0.76
TRAPPC6B-205ENST00000555269 TTC37Q6PGP7 1564 aa19.82■□□□□ 0.76
TRAPPC6B-205ENST00000555269 NEO1Q92859 1461 aa19.81■□□□□ 0.76
TRAPPC6B-205ENST00000555269 AKNAQ7Z591 1439 aa19.81■□□□□ 0.76
TRAPPC6B-205ENST00000555269 CCDC18Q5T9S5 1454 aa19.8■□□□□ 0.76
TRAPPC6B-205ENST00000555269 EFCAB2Q5VUJ9 269 aa19.8■□□□□ 0.76
TRAPPC6B-205ENST00000555269 FANCAO15360 1455 aa19.79■□□□□ 0.76
TRAPPC6B-205ENST00000555269 KIF14Q15058 1648 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms