RNA–Protein interactions for RNA: ENST00000555052.1

ARHGEF40-205, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 3

Gene ARHGEF40, Length 935 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-205ENST00000555052 KIF27Q86VH2 1401 aa27.56■■■□□ 2
ARHGEF40-205ENST00000555052 CUL7Q14999 1698 aa27.52■■■□□ 2
ARHGEF40-205ENST00000555052 KIAA0586Q9BVV6 1533 aa27.48■■□□□ 1.99
ARHGEF40-205ENST00000555052 KIF13AQ9H1H9 1805 aa27.4■■□□□ 1.98
ARHGEF40-205ENST00000555052 CARMIL1Q5VZK9 1371 aa27.36■■□□□ 1.97
ARHGEF40-205ENST00000555052 ADCY10Q96PN6 1610 aa27.35■■□□□ 1.97
ARHGEF40-205ENST00000555052 MAPKBP1O60336 1514 aa27.32■■□□□ 1.96
ARHGEF40-205ENST00000555052 ABCC10Q5T3U5 1492 aa27.29■■□□□ 1.96
ARHGEF40-205ENST00000555052 NPM1P06748 294 aaKnown RBP eCLIP27.24■■□□□ 1.95
ARHGEF40-205ENST00000555052 DIP2BQ9P265 1576 aa27.22■■□□□ 1.95
ARHGEF40-205ENST00000555052 IQGAP2Q13576 1575 aa27.21■■□□□ 1.95
ARHGEF40-205ENST00000555052 PTPRGP23470 1445 aa27.19■■□□□ 1.94
ARHGEF40-205ENST00000555052 FAM69CQ0P6D2 419 aa27.19■■□□□ 1.94
ARHGEF40-205ENST00000555052 CARMIL2Q6F5E8 1435 aa27.16■■□□□ 1.94
ARHGEF40-205ENST00000555052 TNIKQ9UKE5 1360 aa27.15■■□□□ 1.94
ARHGEF40-205ENST00000555052 RAPGEF2Q9Y4G8 1499 aa27.12■■□□□ 1.93
ARHGEF40-205ENST00000555052 AEBP2Q6ZN18 517 aaPredicted RBP27.11■■□□□ 1.93
ARHGEF40-205ENST00000555052 DISP1Q96F81 1524 aa27.11■■□□□ 1.93
ARHGEF40-205ENST00000555052 ABCC2Q92887 1545 aa27.09■■□□□ 1.93
ARHGEF40-205ENST00000555052 UGGT2Q9NYU1 1516 aa27.06■■□□□ 1.92
ARHGEF40-205ENST00000555052 UHRF1BP1LA0JNW5 1464 aa27.05■■□□□ 1.92
ARHGEF40-205ENST00000555052 TTBK1Q5TCY1 1321 aaPredicted RBP27.03■■□□□ 1.92
ARHGEF40-205ENST00000555052 UACAQ9BZF9 1416 aa27■■□□□ 1.91
ARHGEF40-205ENST00000555052 ASXL2Q76L83 1435 aa26.98■■□□□ 1.91
ARHGEF40-205ENST00000555052 TSPOAP1O95153 1857 aa26.98■■□□□ 1.91
ARHGEF40-205ENST00000555052 KIAA0556O60303 1618 aa26.98■■□□□ 1.91
ARHGEF40-205ENST00000555052 PLB1Q6P1J6 1458 aa26.96■■□□□ 1.91
ARHGEF40-205ENST00000555052 KDM6BO15054 1643 aa26.94■■□□□ 1.9
ARHGEF40-205ENST00000555052 KDM5BQ9UGL1 1544 aa26.93■■□□□ 1.9
ARHGEF40-205ENST00000555052 GLI2P10070 1586 aa26.92■■□□□ 1.9
ARHGEF40-205ENST00000555052 CTTNBP2Q8WZ74 1663 aa26.9■■□□□ 1.9
ARHGEF40-205ENST00000555052 PRXQ9BXM0 1461 aa26.88■■□□□ 1.89
ARHGEF40-205ENST00000555052 PPRC1Q5VV67 1664 aaKnown RBP26.87■■□□□ 1.89
ARHGEF40-205ENST00000555052 ZCCHC11Q5TAX3 1644 aaKnown RBP26.84■■□□□ 1.89
ARHGEF40-205ENST00000555052 EPRSP07814 1512 aaKnown RBP26.83■■□□□ 1.89
ARHGEF40-205ENST00000555052 GOLGA3Q08378 1498 aa26.8■■□□□ 1.88
ARHGEF40-205ENST00000555052 MAP3K4Q9Y6R4 1608 aa26.77■■□□□ 1.88
ARHGEF40-205ENST00000555052 ABCA8O94911 1581 aa26.74■■□□□ 1.87
ARHGEF40-205ENST00000555052 WDR7Q9Y4E6 1490 aa26.72■■□□□ 1.87
ARHGEF40-205ENST00000555052 KDM4FA0A1W2PPD8 638 aa26.69■■□□□ 1.86
ARHGEF40-205ENST00000555052 COL17A1Q9UMD9 1497 aaPredicted RBP26.68■■□□□ 1.86
ARHGEF40-205ENST00000555052 TEX14Q8IWB6 1497 aa26.67■■□□□ 1.86
ARHGEF40-205ENST00000555052 CSRNP3Q8WYN3 585 aa26.6■■□□□ 1.85
ARHGEF40-205ENST00000555052 SAMD9Q5K651 1589 aa26.56■■□□□ 1.84
ARHGEF40-205ENST00000555052 CFAP43Q8NDM7 1665 aa26.56■■□□□ 1.84
ARHGEF40-205ENST00000555052 MAGI3Q5TCQ9 1506 aa26.55■■□□□ 1.84
ARHGEF40-205ENST00000555052 EEA1Q15075 1411 aa26.53■■□□□ 1.84
ARHGEF40-205ENST00000555052 CD109Q6YHK3 1445 aa26.53■■□□□ 1.84
ARHGEF40-205ENST00000555052 P3H3Q8IVL6 736 aa26.5■■□□□ 1.83
ARHGEF40-205ENST00000555052 KCNH8Q96L42 1107 aa26.5■■□□□ 1.83
ARHGEF40-205ENST00000555052 ATP10BO94823 1461 aa26.49■■□□□ 1.83
ARHGEF40-205ENST00000555052 ADGRL1O94910 1474 aa26.49■■□□□ 1.83
ARHGEF40-205ENST00000555052 ARID3CA6NKF2 412 aa26.42■■□□□ 1.82
ARHGEF40-205ENST00000555052 FAM9AQ8IZU1 332 aaPredicted RBP26.42■■□□□ 1.82
ARHGEF40-205ENST00000555052 RAPGEF6Q8TEU7 1601 aa26.42■■□□□ 1.82
ARHGEF40-205ENST00000555052 ABCA9Q8IUA7 1624 aa26.37■■□□□ 1.81
ARHGEF40-205ENST00000555052 NUP153P49790 1475 aaKnown RBP26.36■■□□□ 1.81
ARHGEF40-205ENST00000555052 ARAP3Q8WWN8 1544 aa26.35■■□□□ 1.81
ARHGEF40-205ENST00000555052 FHOD3Q2V2M9 1422 aa26.34■■□□□ 1.81
ARHGEF40-205ENST00000555052 KIF21BO75037 1637 aa26.34■■□□□ 1.81
ARHGEF40-205ENST00000555052 PHLDB1Q86UU1 1377 aa26.27■■□□□ 1.8
ARHGEF40-205ENST00000555052 EFCAB5A4FU69 1503 aa26.27■■□□□ 1.8
ARHGEF40-205ENST00000555052 RANGAP1P46060 587 aaPredicted RBP26.26■■□□□ 1.79
ARHGEF40-205ENST00000555052 NEO1Q92859 1461 aa26.23■■□□□ 1.79
ARHGEF40-205ENST00000555052 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.21■■□□□ 1.79
ARHGEF40-205ENST00000555052 HNRNPUL2Q1KMD3 747 aaKnown RBP26.21■■□□□ 1.79
ARHGEF40-205ENST00000555052 FRMPD1Q5SYB0 1578 aa26.15■■□□□ 1.78
ARHGEF40-205ENST00000555052 RAPGEF3O95398 923 aa26.13■■□□□ 1.77
ARHGEF40-205ENST00000555052 HECW2Q9P2P5 1572 aa26.12■■□□□ 1.77
ARHGEF40-205ENST00000555052 PLEKHD1A6NEE1 506 aa26.12■■□□□ 1.77
ARHGEF40-205ENST00000555052 CHIC1Q5VXU3 224 aa26.12■■□□□ 1.77
ARHGEF40-205ENST00000555052 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.09■■□□□ 1.77
ARHGEF40-205ENST00000555052 CDK13Q14004 1512 aaKnown RBP26.08■■□□□ 1.77
ARHGEF40-205ENST00000555052 TTC37Q6PGP7 1564 aa26.07■■□□□ 1.76
ARHGEF40-205ENST00000555052 ARHGAP35Q9NRY4 1499 aa26.04■■□□□ 1.76
ARHGEF40-205ENST00000555052 ADAMTSL3P82987 1691 aa26.04■■□□□ 1.76
ARHGEF40-205ENST00000555052 FANCAO15360 1455 aa26.04■■□□□ 1.76
ARHGEF40-205ENST00000555052 CFAP74Q9C0B2 1584 aa26.03■■□□□ 1.76
ARHGEF40-205ENST00000555052 RICTORQ6R327 1708 aa26.03■■□□□ 1.76
ARHGEF40-205ENST00000555052 UBTFP17480 764 aaKnown RBP26.03■■□□□ 1.76
ARHGEF40-205ENST00000555052 AKNAQ7Z591 1439 aa26.03■■□□□ 1.76
ARHGEF40-205ENST00000555052 FMN1Q68DA7 1419 aa26.02■■□□□ 1.76
ARHGEF40-205ENST00000555052 DENND4BO75064 1496 aaPredicted RBP26.02■■□□□ 1.76
ARHGEF40-205ENST00000555052 ARHGEF40Q8TER5 1519 aa26.01■■□□□ 1.75
ARHGEF40-205ENST00000555052 EHMT2Q96KQ7 1210 aa26■■□□□ 1.75
ARHGEF40-205ENST00000555052 HECW1Q76N89 1606 aa25.99■■□□□ 1.75
ARHGEF40-205ENST00000555052 BCORL1Q5H9F3 1711 aa25.97■■□□□ 1.75
ARHGEF40-205ENST00000555052 PTPRMP28827 1452 aa25.96■■□□□ 1.75
ARHGEF40-205ENST00000555052 ZMYM4Q5VZL5 1548 aa25.95■■□□□ 1.74
ARHGEF40-205ENST00000555052 PLCH2O75038 1416 aa25.93■■□□□ 1.74
ARHGEF40-205ENST00000555052 MADDQ8WXG6 1647 aa25.91■■□□□ 1.74
ARHGEF40-205ENST00000555052 ARID4BQ4LE39 1312 aaPredicted RBP25.88■■□□□ 1.73
ARHGEF40-205ENST00000555052 MAGI2Q86UL8 1455 aa25.86■■□□□ 1.73
ARHGEF40-205ENST00000555052 ATP1B4Q9UN42 357 aaPredicted RBP25.86■■□□□ 1.73
ARHGEF40-205ENST00000555052 ZFYVE16Q7Z3T8 1539 aa25.86■■□□□ 1.73
ARHGEF40-205ENST00000555052 POGZQ7Z3K3 1410 aa25.86■■□□□ 1.73
ARHGEF40-205ENST00000555052 YEATS2Q9ULM3 1422 aa25.86■■□□□ 1.73
ARHGEF40-205ENST00000555052 KIF14Q15058 1648 aa25.85■■□□□ 1.73
ARHGEF40-205ENST00000555052 MYO5CQ9NQX4 1742 aa25.85■■□□□ 1.73
ARHGEF40-205ENST00000555052 TROQ12816 1431 aaPredicted RBP25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms