RNA–Protein interactions for RNA: ENST00000555049.5

CCNK-204, Transcript of cyclin K, humanhuman

TSL 1 (best) BASIC

Gene CCNK, Length 1,606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-204ENST00000555049 GRIN2AQ12879 1464 aa16.3■□□□□ 0.2
CCNK-204ENST00000555049 PPARGC1BQ86YN6 1023 aaKnown RBP16.27■□□□□ 0.2
CCNK-204ENST00000555049 PCGF6Q9BYE7 350 aa16.25■□□□□ 0.19
CCNK-204ENST00000555049 CLASP1Q7Z460 1538 aa16.25■□□□□ 0.19
CCNK-204ENST00000555049 TTBK1Q5TCY1 1321 aaPredicted RBP16.25■□□□□ 0.19
CCNK-204ENST00000555049 NUP160Q12769 1436 aa16.23■□□□□ 0.19
CCNK-204ENST00000555049 CEP170Q5SW79 1584 aa16.23■□□□□ 0.19
CCNK-204ENST00000555049 CUL7Q14999 1698 aa16.23■□□□□ 0.19
CCNK-204ENST00000555049 CARMIL1Q5VZK9 1371 aa16.22■□□□□ 0.19
CCNK-204ENST00000555049 SCAF1Q9H7N4 1312 aaKnown RBP16.21■□□□□ 0.19
CCNK-204ENST00000555049 ZEB1P37275 1124 aaPredicted RBP16.19■□□□□ 0.18
CCNK-204ENST00000555049 ARHGEF11O15085 1522 aa16.18■□□□□ 0.18
CCNK-204ENST00000555049 RIMBP3CA6NJZ7 1639 aa16.16■□□□□ 0.18
CCNK-204ENST00000555049 RIMBP3BA6NNM3 1639 aa16.16■□□□□ 0.18
CCNK-204ENST00000555049 RIMBP3Q9UFD9 1639 aa16.16■□□□□ 0.18
CCNK-204ENST00000555049 RAPGEF2Q9Y4G8 1499 aa16.13■□□□□ 0.17
CCNK-204ENST00000555049 FAM9AQ8IZU1 332 aaPredicted RBP16.12■□□□□ 0.17
CCNK-204ENST00000555049 PRXQ9BXM0 1461 aa16.12■□□□□ 0.17
CCNK-204ENST00000555049 CSRNP3Q8WYN3 585 aa16.11■□□□□ 0.17
CCNK-204ENST00000555049 EEA1Q15075 1411 aa16.09■□□□□ 0.17
CCNK-204ENST00000555049 KIAA0586Q9BVV6 1533 aa16.08■□□□□ 0.17
CCNK-204ENST00000555049 ERCC6L2Q5T890 1561 aa16.08■□□□□ 0.17
CCNK-204ENST00000555049 SHROOM2Q13796 1616 aa16.08■□□□□ 0.16
CCNK-204ENST00000555049 ARAP1Q96P48 1450 aa16.07■□□□□ 0.16
CCNK-204ENST00000555049 JPH4Q96JJ6 628 aa16.06■□□□□ 0.16
CCNK-204ENST00000555049 CYB5RLQ6IPT4 315 aa16.04■□□□□ 0.16
CCNK-204ENST00000555049 PRG4Q92954 1404 aaPredicted RBP16.03■□□□□ 0.16
CCNK-204ENST00000555049 IQGAP2Q13576 1575 aa15.99■□□□□ 0.15
CCNK-204ENST00000555049 KIF21BO75037 1637 aa15.94■□□□□ 0.14
CCNK-204ENST00000555049 TRIM26Q12899 539 aaPredicted RBP15.94■□□□□ 0.14
CCNK-204ENST00000555049 EHMT2Q96KQ7 1210 aa15.94■□□□□ 0.14
CCNK-204ENST00000555049 CTTNBP2Q8WZ74 1663 aa15.93■□□□□ 0.14
CCNK-204ENST00000555049 DMRT2Q9Y5R5 561 aa15.93■□□□□ 0.14
CCNK-204ENST00000555049 DISP1Q96F81 1524 aa15.92■□□□□ 0.14
CCNK-204ENST00000555049 UGGT2Q9NYU1 1516 aa15.92■□□□□ 0.14
CCNK-204ENST00000555049 CARMIL2Q6F5E8 1435 aa15.88■□□□□ 0.13
CCNK-204ENST00000555049 GOLGA3Q08378 1498 aa15.86■□□□□ 0.13
CCNK-204ENST00000555049 ACIN1Q9UKV3 1341 aaKnown RBP15.86■□□□□ 0.13
CCNK-204ENST00000555049 TNIKQ9UKE5 1360 aa15.85■□□□□ 0.13
CCNK-204ENST00000555049 KIAA0556O60303 1618 aa15.85■□□□□ 0.13
CCNK-204ENST00000555049 PTPRGP23470 1445 aa15.84■□□□□ 0.13
CCNK-204ENST00000555049 UBTFP17480 764 aaKnown RBP15.83■□□□□ 0.12
CCNK-204ENST00000555049 RANGAP1P46060 587 aaPredicted RBP15.82■□□□□ 0.12
CCNK-204ENST00000555049 P3H3Q8IVL6 736 aa15.79■□□□□ 0.12
CCNK-204ENST00000555049 CACNB1Q02641 598 aaPredicted RBP15.79■□□□□ 0.12
CCNK-204ENST00000555049 SAMD9Q5K651 1589 aa15.78■□□□□ 0.12
CCNK-204ENST00000555049 ADCY10Q96PN6 1610 aa15.77■□□□□ 0.12
CCNK-204ENST00000555049 UACAQ9BZF9 1416 aa15.73■□□□□ 0.11
CCNK-204ENST00000555049 PLB1Q6P1J6 1458 aa15.72■□□□□ 0.11
CCNK-204ENST00000555049 FHOD3Q2V2M9 1422 aa15.72■□□□□ 0.11
CCNK-204ENST00000555049 CENPBP07199 599 aaPredicted RBP15.72■□□□□ 0.11
CCNK-204ENST00000555049 MAPK8IP2Q13387 824 aaPredicted RBP15.72■□□□□ 0.11
CCNK-204ENST00000555049 ABCC2Q92887 1545 aa15.7■□□□□ 0.1
CCNK-204ENST00000555049 UHRF1BP1LA0JNW5 1464 aa15.7■□□□□ 0.1
CCNK-204ENST00000555049 EFCAB5A4FU69 1503 aa15.69■□□□□ 0.1
CCNK-204ENST00000555049 ARHGAP35Q9NRY4 1499 aa15.69■□□□□ 0.1
CCNK-204ENST00000555049 ABCA8O94911 1581 aa15.68■□□□□ 0.1
CCNK-204ENST00000555049 LOC105371045A0A1W2PR82 267 aa15.68■□□□□ 0.1
CCNK-204ENST00000555049 NPM1P06748 294 aaKnown RBP eCLIP15.67■□□□□ 0.1
CCNK-204ENST00000555049 TRHP20396 242 aaPredicted RBP15.65■□□□□ 0.1
CCNK-204ENST00000555049 KDM5BQ9UGL1 1544 aa15.65■□□□□ 0.1
CCNK-204ENST00000555049 MAPKBP1O60336 1514 aa15.64■□□□□ 0.09
CCNK-204ENST00000555049 ARID3CA6NKF2 412 aa15.61■□□□□ 0.09
CCNK-204ENST00000555049 NEUROD1Q13562 356 aa15.61■□□□□ 0.09
CCNK-204ENST00000555049 ZCCHC11Q5TAX3 1644 aaKnown RBP15.6■□□□□ 0.09
CCNK-204ENST00000555049 RAPGEF6Q8TEU7 1601 aa15.59■□□□□ 0.09
CCNK-204ENST00000555049 CLIP1P30622 1438 aa15.59■□□□□ 0.09
CCNK-204ENST00000555049 ASXL2Q76L83 1435 aa15.59■□□□□ 0.09
CCNK-204ENST00000555049 GTF3C3Q9Y5Q9 886 aa15.58■□□□□ 0.09
CCNK-204ENST00000555049 NUP153P49790 1475 aaKnown RBP15.58■□□□□ 0.08
CCNK-204ENST00000555049 ATP10BO94823 1461 aa15.57■□□□□ 0.08
CCNK-204ENST00000555049 ABCC10Q5T3U5 1492 aa15.57■□□□□ 0.08
CCNK-204ENST00000555049 CEP162Q5TB80 1403 aa15.56■□□□□ 0.08
CCNK-204ENST00000555049 FMN1Q68DA7 1419 aa15.55■□□□□ 0.08
CCNK-204ENST00000555049 FAM69CQ0P6D2 419 aa15.54■□□□□ 0.08
CCNK-204ENST00000555049 DIP2BQ9P265 1576 aa15.54■□□□□ 0.08
CCNK-204ENST00000555049 KIF13AQ9H1H9 1805 aa15.53■□□□□ 0.08
CCNK-204ENST00000555049 WDR7Q9Y4E6 1490 aa15.51■□□□□ 0.07
CCNK-204ENST00000555049 EPRSP07814 1512 aaKnown RBP15.5■□□□□ 0.07
CCNK-204ENST00000555049 ATP1B4Q9UN42 357 aaPredicted RBP15.49■□□□□ 0.07
CCNK-204ENST00000555049 CDK13Q14004 1512 aaKnown RBP15.48■□□□□ 0.07
CCNK-204ENST00000555049 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.48■□□□□ 0.07
CCNK-204ENST00000555049 HNRNPUL2Q1KMD3 747 aaKnown RBP15.48■□□□□ 0.07
CCNK-204ENST00000555049 PCF11O94913 1555 aaKnown RBP15.47■□□□□ 0.07
CCNK-204ENST00000555049 KCNH8Q96L42 1107 aa15.46■□□□□ 0.07
CCNK-204ENST00000555049 HECW1Q76N89 1606 aa15.46■□□□□ 0.07
CCNK-204ENST00000555049 GLI2P10070 1586 aa15.46■□□□□ 0.07
CCNK-204ENST00000555049 CASKIN1Q8WXD9 1431 aa15.46■□□□□ 0.07
CCNK-204ENST00000555049 LRRIQ1Q96JM4 1722 aa15.43■□□□□ 0.06
CCNK-204ENST00000555049 FYCO1Q9BQS8 1478 aa15.42■□□□□ 0.06
CCNK-204ENST00000555049 PLEKHD1A6NEE1 506 aa15.4■□□□□ 0.06
CCNK-204ENST00000555049 MAP3K4Q9Y6R4 1608 aa15.4■□□□□ 0.06
CCNK-204ENST00000555049 PPRC1Q5VV67 1664 aaKnown RBP15.38■□□□□ 0.05
CCNK-204ENST00000555049 TSPOAP1O95153 1857 aa15.37■□□□□ 0.05
CCNK-204ENST00000555049 CCDC18Q5T9S5 1454 aa15.36■□□□□ 0.05
CCNK-204ENST00000555049 CD109Q6YHK3 1445 aa15.36■□□□□ 0.05
CCNK-204ENST00000555049 BCL11AQ9H165 835 aa15.35■□□□□ 0.05
CCNK-204ENST00000555049 VPS8Q8N3P4 1428 aa15.35■□□□□ 0.05
CCNK-204ENST00000555049 MAGI3Q5TCQ9 1506 aa15.35■□□□□ 0.05
CCNK-204ENST00000555049 ABCA9Q8IUA7 1624 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms