RNA–Protein interactions for RNA: ENST00000554974.5

XRCC3-210, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4 BASIC

Gene XRCC3, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-210ENST00000554974 AEBP2Q6ZN18 517 aaPredicted RBP26.57■■□□□ 1.84
XRCC3-210ENST00000554974 CUL7Q14999 1698 aa26.56■■□□□ 1.84
XRCC3-210ENST00000554974 ADCY10Q96PN6 1610 aa26.54■■□□□ 1.84
XRCC3-210ENST00000554974 KIF27Q86VH2 1401 aa26.53■■□□□ 1.84
XRCC3-210ENST00000554974 IGF1RP08069 1367 aa26.52■■□□□ 1.84
XRCC3-210ENST00000554974 KIAA0586Q9BVV6 1533 aa26.5■■□□□ 1.83
XRCC3-210ENST00000554974 MAPKBP1O60336 1514 aa26.47■■□□□ 1.83
XRCC3-210ENST00000554974 ABCC10Q5T3U5 1492 aa26.45■■□□□ 1.82
XRCC3-210ENST00000554974 DIP2BQ9P265 1576 aa26.45■■□□□ 1.82
XRCC3-210ENST00000554974 NPM1P06748 294 aaKnown RBP eCLIP26.4■■□□□ 1.82
XRCC3-210ENST00000554974 FAM69CQ0P6D2 419 aa26.39■■□□□ 1.82
XRCC3-210ENST00000554974 CARMIL1Q5VZK9 1371 aa26.34■■□□□ 1.81
XRCC3-210ENST00000554974 TSPOAP1O95153 1857 aa26.3■■□□□ 1.8
XRCC3-210ENST00000554974 IQGAP2Q13576 1575 aa26.29■■□□□ 1.8
XRCC3-210ENST00000554974 TTBK1Q5TCY1 1321 aaPredicted RBP26.28■■□□□ 1.8
XRCC3-210ENST00000554974 PTPRGP23470 1445 aa26.28■■□□□ 1.8
XRCC3-210ENST00000554974 KDM6BO15054 1643 aa26.25■■□□□ 1.79
XRCC3-210ENST00000554974 CARMIL2Q6F5E8 1435 aa26.22■■□□□ 1.79
XRCC3-210ENST00000554974 TNIKQ9UKE5 1360 aa26.21■■□□□ 1.79
XRCC3-210ENST00000554974 ABCC2Q92887 1545 aa26.19■■□□□ 1.78
XRCC3-210ENST00000554974 DISP1Q96F81 1524 aa26.16■■□□□ 1.78
XRCC3-210ENST00000554974 ASXL2Q76L83 1435 aa26.13■■□□□ 1.77
XRCC3-210ENST00000554974 RAPGEF2Q9Y4G8 1499 aa26.11■■□□□ 1.77
XRCC3-210ENST00000554974 UHRF1BP1LA0JNW5 1464 aa26.11■■□□□ 1.77
XRCC3-210ENST00000554974 PPRC1Q5VV67 1664 aaKnown RBP26.09■■□□□ 1.77
XRCC3-210ENST00000554974 UGGT2Q9NYU1 1516 aa26.09■■□□□ 1.77
XRCC3-210ENST00000554974 UACAQ9BZF9 1416 aa26.08■■□□□ 1.77
XRCC3-210ENST00000554974 PLB1Q6P1J6 1458 aa26.07■■□□□ 1.76
XRCC3-210ENST00000554974 KIAA0556O60303 1618 aa26.06■■□□□ 1.76
XRCC3-210ENST00000554974 GLI2P10070 1586 aa26.06■■□□□ 1.76
XRCC3-210ENST00000554974 ZCCHC11Q5TAX3 1644 aaKnown RBP26.03■■□□□ 1.76
XRCC3-210ENST00000554974 CTTNBP2Q8WZ74 1663 aa26.01■■□□□ 1.75
XRCC3-210ENST00000554974 KDM5BQ9UGL1 1544 aa26.01■■□□□ 1.75
XRCC3-210ENST00000554974 KDM4FA0A1W2PPD8 638 aa25.98■■□□□ 1.75
XRCC3-210ENST00000554974 MAP3K4Q9Y6R4 1608 aa25.97■■□□□ 1.75
XRCC3-210ENST00000554974 EPRSP07814 1512 aaKnown RBP25.97■■□□□ 1.75
XRCC3-210ENST00000554974 COL17A1Q9UMD9 1497 aaPredicted RBP25.88■■□□□ 1.73
XRCC3-210ENST00000554974 WDR7Q9Y4E6 1490 aa25.85■■□□□ 1.73
XRCC3-210ENST00000554974 TEX14Q8IWB6 1497 aa25.84■■□□□ 1.73
XRCC3-210ENST00000554974 GOLGA3Q08378 1498 aa25.83■■□□□ 1.73
XRCC3-210ENST00000554974 ABCA8O94911 1581 aa25.82■■□□□ 1.72
XRCC3-210ENST00000554974 PRXQ9BXM0 1461 aa25.81■■□□□ 1.72
XRCC3-210ENST00000554974 ADGRL1O94910 1474 aa25.8■■□□□ 1.72
XRCC3-210ENST00000554974 CFAP43Q8NDM7 1665 aa25.74■■□□□ 1.71
XRCC3-210ENST00000554974 CD109Q6YHK3 1445 aa25.67■■□□□ 1.7
XRCC3-210ENST00000554974 KCNH8Q96L42 1107 aa25.67■■□□□ 1.7
XRCC3-210ENST00000554974 MAGI3Q5TCQ9 1506 aa25.67■■□□□ 1.7
XRCC3-210ENST00000554974 ARID3CA6NKF2 412 aa25.63■■□□□ 1.69
XRCC3-210ENST00000554974 P3H3Q8IVL6 736 aa25.61■■□□□ 1.69
XRCC3-210ENST00000554974 SAMD9Q5K651 1589 aa25.6■■□□□ 1.69
XRCC3-210ENST00000554974 ATP10BO94823 1461 aa25.56■■□□□ 1.68
XRCC3-210ENST00000554974 KIF21BO75037 1637 aa25.54■■□□□ 1.68
XRCC3-210ENST00000554974 HECW2Q9P2P5 1572 aa25.52■■□□□ 1.68
XRCC3-210ENST00000554974 RAPGEF6Q8TEU7 1601 aa25.52■■□□□ 1.68
XRCC3-210ENST00000554974 CSRNP3Q8WYN3 585 aa25.51■■□□□ 1.67
XRCC3-210ENST00000554974 ABCA9Q8IUA7 1624 aa25.51■■□□□ 1.67
XRCC3-210ENST00000554974 ARAP3Q8WWN8 1544 aa25.47■■□□□ 1.67
XRCC3-210ENST00000554974 FAM9AQ8IZU1 332 aaPredicted RBP25.46■■□□□ 1.67
XRCC3-210ENST00000554974 NUP153P49790 1475 aaKnown RBP25.42■■□□□ 1.66
XRCC3-210ENST00000554974 RANGAP1P46060 587 aaPredicted RBP25.42■■□□□ 1.66
XRCC3-210ENST00000554974 FHOD3Q2V2M9 1422 aa25.41■■□□□ 1.66
XRCC3-210ENST00000554974 EEA1Q15075 1411 aa25.39■■□□□ 1.66
XRCC3-210ENST00000554974 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.37■■□□□ 1.65
XRCC3-210ENST00000554974 HNRNPUL2Q1KMD3 747 aaKnown RBP25.37■■□□□ 1.65
XRCC3-210ENST00000554974 FRMPD1Q5SYB0 1578 aa25.35■■□□□ 1.65
XRCC3-210ENST00000554974 NEO1Q92859 1461 aa25.34■■□□□ 1.65
XRCC3-210ENST00000554974 ILDR1Q86SU0 546 aaPredicted RBP25.34■■□□□ 1.65
XRCC3-210ENST00000554974 RAPGEF3O95398 923 aa25.32■■□□□ 1.64
XRCC3-210ENST00000554974 PHLDB1Q86UU1 1377 aa25.31■■□□□ 1.64
XRCC3-210ENST00000554974 ADAMTSL3P82987 1691 aa25.29■■□□□ 1.64
XRCC3-210ENST00000554974 EFCAB5A4FU69 1503 aa25.27■■□□□ 1.64
XRCC3-210ENST00000554974 TTC37Q6PGP7 1564 aa25.23■■□□□ 1.63
XRCC3-210ENST00000554974 BCORL1Q5H9F3 1711 aa25.23■■□□□ 1.63
XRCC3-210ENST00000554974 RICTORQ6R327 1708 aa25.23■■□□□ 1.63
XRCC3-210ENST00000554974 PTPRMP28827 1452 aa25.22■■□□□ 1.63
XRCC3-210ENST00000554974 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.22■■□□□ 1.632e-6■■■■■ 51.7
XRCC3-210ENST00000554974 ARHGEF40Q8TER5 1519 aa25.22■■□□□ 1.63
XRCC3-210ENST00000554974 MADDQ8WXG6 1647 aa25.2■■□□□ 1.62
XRCC3-210ENST00000554974 CDK13Q14004 1512 aaKnown RBP25.2■■□□□ 1.62
XRCC3-210ENST00000554974 CFAP74Q9C0B2 1584 aa25.19■■□□□ 1.62
XRCC3-210ENST00000554974 FANCAO15360 1455 aa25.18■■□□□ 1.62
XRCC3-210ENST00000554974 PLEKHD1A6NEE1 506 aa25.18■■□□□ 1.62
XRCC3-210ENST00000554974 DENND4BO75064 1496 aaPredicted RBP25.16■■□□□ 1.62
XRCC3-210ENST00000554974 AKNAQ7Z591 1439 aa25.15■■□□□ 1.62
XRCC3-210ENST00000554974 ARID4BQ4LE39 1312 aaPredicted RBP25.14■■□□□ 1.62
XRCC3-210ENST00000554974 EHMT2Q96KQ7 1210 aa25.13■■□□□ 1.61
XRCC3-210ENST00000554974 RIMS1Q86UR5 1692 aaKnown RBP25.11■■□□□ 1.61
XRCC3-210ENST00000554974 SIGLEC1Q9BZZ2 1709 aa25.1■■□□□ 1.61
XRCC3-210ENST00000554974 ZMYM4Q5VZL5 1548 aa25.1■■□□□ 1.61
XRCC3-210ENST00000554974 HECW1Q76N89 1606 aa25.07■■□□□ 1.6
XRCC3-210ENST00000554974 ZFYVE16Q7Z3T8 1539 aa25.07■■□□□ 1.6
XRCC3-210ENST00000554974 PCF11O94913 1555 aaKnown RBP25.05■■□□□ 1.6
XRCC3-210ENST00000554974 YEATS2Q9ULM3 1422 aa25.05■■□□□ 1.6
XRCC3-210ENST00000554974 ARHGAP35Q9NRY4 1499 aa25.04■■□□□ 1.6
XRCC3-210ENST00000554974 UBTFP17480 764 aaKnown RBP25.03■■□□□ 1.6
XRCC3-210ENST00000554974 LMTK3Q96Q04 1460 aa25.02■■□□□ 1.6
XRCC3-210ENST00000554974 MYO5CQ9NQX4 1742 aa25.01■■□□□ 1.59
XRCC3-210ENST00000554974 FMN1Q68DA7 1419 aa25.01■■□□□ 1.59
XRCC3-210ENST00000554974 KIF14Q15058 1648 aa25.01■■□□□ 1.59
XRCC3-210ENST00000554974 ATP1B4Q9UN42 357 aaPredicted RBP25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms