RNA–Protein interactions for RNA: ENST00000554869.5

LRR1-204, Transcript of leucine rich repeat protein 1, humanhuman

TSL 1 (best)

Gene LRR1, Length 1,886 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRR1-204ENST00000554869 ERCC6L2Q5T890 1561 aa30.02■■■□□ 2.4
LRR1-204ENST00000554869 KIAA0586Q9BVV6 1533 aa30■■■□□ 2.39
LRR1-204ENST00000554869 PRG4Q92954 1404 aaPredicted RBP29.96■■■□□ 2.39
LRR1-204ENST00000554869 RAPGEF2Q9Y4G8 1499 aa29.95■■■□□ 2.39
LRR1-204ENST00000554869 CHIC1Q5VXU3 224 aa29.83■■■□□ 2.37
LRR1-204ENST00000554869 PRXQ9BXM0 1461 aa29.8■■■□□ 2.36
LRR1-204ENST00000554869 IQGAP2Q13576 1575 aa29.8■■■□□ 2.36
LRR1-204ENST00000554869 CSRNP3Q8WYN3 585 aa29.78■■■□□ 2.36
LRR1-204ENST00000554869 EEA1Q15075 1411 aa29.77■■■□□ 2.36
LRR1-204ENST00000554869 CARMIL2Q6F5E8 1435 aa29.7■■■□□ 2.34
LRR1-204ENST00000554869 TRHP20396 242 aaPredicted RBP29.66■■■□□ 2.34
LRR1-204ENST00000554869 CTTNBP2Q8WZ74 1663 aa29.66■■■□□ 2.34
LRR1-204ENST00000554869 FAM9AQ8IZU1 332 aaPredicted RBP29.65■■■□□ 2.34
LRR1-204ENST00000554869 UGGT2Q9NYU1 1516 aa29.64■■■□□ 2.33
LRR1-204ENST00000554869 TNIKQ9UKE5 1360 aa29.61■■■□□ 2.33
LRR1-204ENST00000554869 PTPRGP23470 1445 aa29.6■■■□□ 2.33
LRR1-204ENST00000554869 DISP1Q96F81 1524 aa29.6■■■□□ 2.33
LRR1-204ENST00000554869 TTBK1Q5TCY1 1321 aaPredicted RBP29.55■■■□□ 2.32
LRR1-204ENST00000554869 NPM1P06748 294 aaKnown RBP eCLIP29.51■■■□□ 2.31
LRR1-204ENST00000554869 KIAA0556O60303 1618 aa29.51■■■□□ 2.31
LRR1-204ENST00000554869 ADCY10Q96PN6 1610 aa29.51■■■□□ 2.31
LRR1-204ENST00000554869 GOLGA3Q08378 1498 aa29.48■■■□□ 2.31
LRR1-204ENST00000554869 KIF21BO75037 1637 aa29.45■■■□□ 2.31
LRR1-204ENST00000554869 UACAQ9BZF9 1416 aa29.39■■■□□ 2.29
LRR1-204ENST00000554869 UHRF1BP1LA0JNW5 1464 aa29.37■■■□□ 2.29
LRR1-204ENST00000554869 MAPKBP1O60336 1514 aa29.35■■■□□ 2.29
LRR1-204ENST00000554869 ABCC2Q92887 1545 aa29.34■■■□□ 2.29
LRR1-204ENST00000554869 P3H3Q8IVL6 736 aa29.29■■■□□ 2.28
LRR1-204ENST00000554869 EHMT2Q96KQ7 1210 aa29.27■■■□□ 2.28
LRR1-204ENST00000554869 SAMD9Q5K651 1589 aa29.26■■■□□ 2.28
LRR1-204ENST00000554869 UBTFP17480 764 aaKnown RBP29.26■■■□□ 2.27
LRR1-204ENST00000554869 KIF13AQ9H1H9 1805 aa29.25■■■□□ 2.27
LRR1-204ENST00000554869 ABCC10Q5T3U5 1492 aa29.25■■■□□ 2.27
LRR1-204ENST00000554869 RANGAP1P46060 587 aaPredicted RBP29.25■■■□□ 2.27
LRR1-204ENST00000554869 PLB1Q6P1J6 1458 aa29.24■■■□□ 2.27
LRR1-204ENST00000554869 KDM5BQ9UGL1 1544 aa29.22■■■□□ 2.27
LRR1-204ENST00000554869 FAM69CQ0P6D2 419 aa29.22■■■□□ 2.27
LRR1-204ENST00000554869 ABCA8O94911 1581 aa29.2■■■□□ 2.27
LRR1-204ENST00000554869 DIP2BQ9P265 1576 aa29.18■■■□□ 2.26
LRR1-204ENST00000554869 ASXL2Q76L83 1435 aa29.17■■■□□ 2.26
LRR1-204ENST00000554869 ZCCHC11Q5TAX3 1644 aaKnown RBP29.15■■■□□ 2.26
LRR1-204ENST00000554869 EFCAB5A4FU69 1503 aa29.12■■■□□ 2.25
LRR1-204ENST00000554869 FHOD3Q2V2M9 1422 aa29.1■■■□□ 2.25
LRR1-204ENST00000554869 RAPGEF6Q8TEU7 1601 aa29.03■■■□□ 2.24
LRR1-204ENST00000554869 GLI2P10070 1586 aa29.01■■■□□ 2.23
LRR1-204ENST00000554869 WDR7Q9Y4E6 1490 aa29■■■□□ 2.23
LRR1-204ENST00000554869 EPRSP07814 1512 aaKnown RBP28.99■■■□□ 2.23
LRR1-204ENST00000554869 ATP10BO94823 1461 aa28.98■■■□□ 2.23
LRR1-204ENST00000554869 ARID3CA6NKF2 412 aa28.97■■■□□ 2.23
LRR1-204ENST00000554869 TSPOAP1O95153 1857 aa28.97■■■□□ 2.23
LRR1-204ENST00000554869 ARHGAP35Q9NRY4 1499 aa28.96■■■□□ 2.23
LRR1-204ENST00000554869 NUP153P49790 1475 aaKnown RBP28.91■■■□□ 2.22
LRR1-204ENST00000554869 KCNH8Q96L42 1107 aa28.89■■■□□ 2.22
LRR1-204ENST00000554869 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.88■■■□□ 2.21
LRR1-204ENST00000554869 HNRNPUL2Q1KMD3 747 aaKnown RBP28.88■■■□□ 2.21
LRR1-204ENST00000554869 FMN1Q68DA7 1419 aa28.88■■■□□ 2.21
LRR1-204ENST00000554869 MAP3K4Q9Y6R4 1608 aa28.86■■■□□ 2.21
LRR1-204ENST00000554869 PPRC1Q5VV67 1664 aaKnown RBP28.83■■■□□ 2.21
LRR1-204ENST00000554869 CFAP43Q8NDM7 1665 aa28.77■■■□□ 2.2
LRR1-204ENST00000554869 KDM6BO15054 1643 aa28.76■■■□□ 2.2
LRR1-204ENST00000554869 TEX14Q8IWB6 1497 aa28.76■■■□□ 2.19
LRR1-204ENST00000554869 CD109Q6YHK3 1445 aa28.76■■■□□ 2.19
LRR1-204ENST00000554869 ATP1B4Q9UN42 357 aaPredicted RBP28.76■■■□□ 2.19
LRR1-204ENST00000554869 PLEKHD1A6NEE1 506 aa28.75■■■□□ 2.19
LRR1-204ENST00000554869 CLIP1P30622 1438 aa28.75■■■□□ 2.19
LRR1-204ENST00000554869 HECW1Q76N89 1606 aa28.73■■■□□ 2.19
LRR1-204ENST00000554869 MAGI3Q5TCQ9 1506 aa28.7■■■□□ 2.19
LRR1-204ENST00000554869 CDK13Q14004 1512 aaKnown RBP28.69■■■□□ 2.18
LRR1-204ENST00000554869 ABCA9Q8IUA7 1624 aa28.68■■■□□ 2.18
LRR1-204ENST00000554869 LOC105371045A0A1W2PR82 267 aa28.62■■■□□ 2.17
LRR1-204ENST00000554869 CASKIN1Q8WXD9 1431 aa28.62■■■□□ 2.17
LRR1-204ENST00000554869 CDK11AQ9UQ88 783 aaPredicted RBP28.61■■■□□ 2.17
LRR1-204ENST00000554869 PCF11O94913 1555 aaKnown RBP28.59■■■□□ 2.17
LRR1-204ENST00000554869 COL17A1Q9UMD9 1497 aaPredicted RBP28.58■■■□□ 2.17
LRR1-204ENST00000554869 CEP162Q5TB80 1403 aa28.58■■■□□ 2.17
LRR1-204ENST00000554869 LRRIQ1Q96JM4 1722 aa28.57■■■□□ 2.16
LRR1-204ENST00000554869 FYCO1Q9BQS8 1478 aa28.54■■■□□ 2.16
LRR1-204ENST00000554869 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.53■■■□□ 2.16
LRR1-204ENST00000554869 CCDC18Q5T9S5 1454 aa28.53■■■□□ 2.16
LRR1-204ENST00000554869 PHLDB1Q86UU1 1377 aa28.5■■■□□ 2.15
LRR1-204ENST00000554869 TROQ12816 1431 aaPredicted RBP28.48■■■□□ 2.15
LRR1-204ENST00000554869 TTC37Q6PGP7 1564 aa28.47■■■□□ 2.15
LRR1-204ENST00000554869 NEO1Q92859 1461 aa28.47■■■□□ 2.15
LRR1-204ENST00000554869 ARAP3Q8WWN8 1544 aa28.46■■■□□ 2.15
LRR1-204ENST00000554869 KIF14Q15058 1648 aa28.42■■■□□ 2.14
LRR1-204ENST00000554869 FANCAO15360 1455 aa28.38■■■□□ 2.13
LRR1-204ENST00000554869 PLCH2O75038 1416 aa28.38■■■□□ 2.13
LRR1-204ENST00000554869 CFAP74Q9C0B2 1584 aa28.37■■■□□ 2.13
LRR1-204ENST00000554869 AKNAQ7Z591 1439 aa28.35■■■□□ 2.13
LRR1-204ENST00000554869 MYO5CQ9NQX4 1742 aa28.34■■■□□ 2.13
LRR1-204ENST00000554869 RAPGEF3O95398 923 aa28.32■■■□□ 2.12
LRR1-204ENST00000554869 EFCAB2Q5VUJ9 269 aa28.29■■■□□ 2.12
LRR1-204ENST00000554869 DENND4BO75064 1496 aaPredicted RBP28.27■■■□□ 2.12
LRR1-204ENST00000554869 AEBP2Q6ZN18 517 aaPredicted RBP28.27■■■□□ 2.12
LRR1-204ENST00000554869 VPS8Q8N3P4 1428 aa28.25■■■□□ 2.11
LRR1-204ENST00000554869 MTUS2Q5JR59 1369 aa28.24■■■□□ 2.11
LRR1-204ENST00000554869 FRMPD1Q5SYB0 1578 aa28.23■■■□□ 2.11
LRR1-204ENST00000554869 ARHGAP5Q13017 1502 aa28.23■■■□□ 2.11
LRR1-204ENST00000554869 ADGRL1O94910 1474 aa28.23■■■□□ 2.11
LRR1-204ENST00000554869 RICTORQ6R327 1708 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms