RNA–Protein interactions for RNA: ENST00000554835.1

PRKCH-210, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-210ENST00000554835 KIF13AQ9H1H9 1805 aa31.98■■■□□ 2.71
PRKCH-210ENST00000554835 KIF27Q86VH2 1401 aa31.97■■■□□ 2.71
PRKCH-210ENST00000554835 KIAA0586Q9BVV6 1533 aa31.93■■■□□ 2.7
PRKCH-210ENST00000554835 CUL7Q14999 1698 aa31.92■■■□□ 2.7
PRKCH-210ENST00000554835 ADCY10Q96PN6 1610 aa31.86■■■□□ 2.69
PRKCH-210ENST00000554835 AEBP2Q6ZN18 517 aaPredicted RBP31.8■■■□□ 2.68
PRKCH-210ENST00000554835 MAPKBP1O60336 1514 aa31.8■■■□□ 2.68
PRKCH-210ENST00000554835 ABCC10Q5T3U5 1492 aa31.79■■■□□ 2.68
PRKCH-210ENST00000554835 CARMIL1Q5VZK9 1371 aa31.79■■■□□ 2.68
PRKCH-210ENST00000554835 NPM1P06748 294 aaKnown RBP eCLIP31.76■■■□□ 2.67
PRKCH-210ENST00000554835 FAM69CQ0P6D2 419 aa31.76■■■□□ 2.67
PRKCH-210ENST00000554835 DIP2BQ9P265 1576 aa31.72■■■□□ 2.67
PRKCH-210ENST00000554835 PTPRGP23470 1445 aa31.65■■■□□ 2.66
PRKCH-210ENST00000554835 IQGAP2Q13576 1575 aa31.6■■■□□ 2.65
PRKCH-210ENST00000554835 TNIKQ9UKE5 1360 aa31.58■■■□□ 2.65
PRKCH-210ENST00000554835 TTBK1Q5TCY1 1321 aaPredicted RBP31.58■■■□□ 2.65
PRKCH-210ENST00000554835 CARMIL2Q6F5E8 1435 aa31.57■■■□□ 2.64
PRKCH-210ENST00000554835 DISP1Q96F81 1524 aa31.51■■■□□ 2.63
PRKCH-210ENST00000554835 TSPOAP1O95153 1857 aa31.5■■■□□ 2.63
PRKCH-210ENST00000554835 ABCC2Q92887 1545 aa31.5■■■□□ 2.63
PRKCH-210ENST00000554835 RAPGEF2Q9Y4G8 1499 aa31.48■■■□□ 2.63
PRKCH-210ENST00000554835 KDM6BO15054 1643 aa31.43■■■□□ 2.62
PRKCH-210ENST00000554835 UHRF1BP1LA0JNW5 1464 aa31.43■■■□□ 2.62
PRKCH-210ENST00000554835 UGGT2Q9NYU1 1516 aa31.42■■■□□ 2.62
PRKCH-210ENST00000554835 ASXL2Q76L83 1435 aa31.41■■■□□ 2.62
PRKCH-210ENST00000554835 UACAQ9BZF9 1416 aa31.41■■■□□ 2.62
PRKCH-210ENST00000554835 PLB1Q6P1J6 1458 aa31.36■■■□□ 2.61
PRKCH-210ENST00000554835 KIAA0556O60303 1618 aa31.33■■■□□ 2.61
PRKCH-210ENST00000554835 GLI2P10070 1586 aa31.33■■■□□ 2.61
PRKCH-210ENST00000554835 PPRC1Q5VV67 1664 aaKnown RBP31.32■■■□□ 2.6
PRKCH-210ENST00000554835 KDM5BQ9UGL1 1544 aa31.31■■■□□ 2.6
PRKCH-210ENST00000554835 KDM4FA0A1W2PPD8 638 aa31.25■■■□□ 2.59
PRKCH-210ENST00000554835 ZCCHC11Q5TAX3 1644 aaKnown RBP31.24■■■□□ 2.59
PRKCH-210ENST00000554835 EPRSP07814 1512 aaKnown RBP31.24■■■□□ 2.59
PRKCH-210ENST00000554835 CTTNBP2Q8WZ74 1663 aa31.22■■■□□ 2.59
PRKCH-210ENST00000554835 MAP3K4Q9Y6R4 1608 aa31.17■■■□□ 2.58
PRKCH-210ENST00000554835 PRXQ9BXM0 1461 aa31.17■■■□□ 2.58
PRKCH-210ENST00000554835 COL17A1Q9UMD9 1497 aaPredicted RBP31.15■■■□□ 2.58
PRKCH-210ENST00000554835 GOLGA3Q08378 1498 aa31.08■■■□□ 2.57
PRKCH-210ENST00000554835 WDR7Q9Y4E6 1490 aa31.08■■■□□ 2.57
PRKCH-210ENST00000554835 ABCA8O94911 1581 aa31.07■■■□□ 2.56
PRKCH-210ENST00000554835 TEX14Q8IWB6 1497 aa31.01■■■□□ 2.56
PRKCH-210ENST00000554835 KCNH8Q96L42 1107 aa30.92■■■□□ 2.54
PRKCH-210ENST00000554835 ADGRL1O94910 1474 aa30.92■■■□□ 2.54
PRKCH-210ENST00000554835 CD109Q6YHK3 1445 aa30.9■■■□□ 2.54
PRKCH-210ENST00000554835 CFAP43Q8NDM7 1665 aa30.89■■■□□ 2.54
PRKCH-210ENST00000554835 MAGI3Q5TCQ9 1506 aa30.88■■■□□ 2.53
PRKCH-210ENST00000554835 P3H3Q8IVL6 736 aa30.88■■■□□ 2.53
PRKCH-210ENST00000554835 CSRNP3Q8WYN3 585 aa30.86■■■□□ 2.53
PRKCH-210ENST00000554835 ATP10BO94823 1461 aa30.82■■■□□ 2.53
PRKCH-210ENST00000554835 ARID3CA6NKF2 412 aa30.82■■■□□ 2.52
PRKCH-210ENST00000554835 SAMD9Q5K651 1589 aa30.8■■■□□ 2.52
PRKCH-210ENST00000554835 RAPGEF6Q8TEU7 1601 aa30.69■■■□□ 2.5
PRKCH-210ENST00000554835 FAM9AQ8IZU1 332 aaPredicted RBP30.67■■■□□ 2.5
PRKCH-210ENST00000554835 ABCA9Q8IUA7 1624 aa30.66■■■□□ 2.5
PRKCH-210ENST00000554835 ARAP3Q8WWN8 1544 aa30.66■■■□□ 2.5
PRKCH-210ENST00000554835 EEA1Q15075 1411 aa30.65■■■□□ 2.5
PRKCH-210ENST00000554835 NUP153P49790 1475 aaKnown RBP30.62■■■□□ 2.49
PRKCH-210ENST00000554835 RANGAP1P46060 587 aaPredicted RBP30.6■■■□□ 2.49
PRKCH-210ENST00000554835 FHOD3Q2V2M9 1422 aa30.6■■■□□ 2.49
PRKCH-210ENST00000554835 KIF21BO75037 1637 aa30.58■■■□□ 2.49
PRKCH-210ENST00000554835 HECW2Q9P2P5 1572 aa30.54■■■□□ 2.48
PRKCH-210ENST00000554835 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.53■■■□□ 2.48
PRKCH-210ENST00000554835 HNRNPUL2Q1KMD3 747 aaKnown RBP30.53■■■□□ 2.48
PRKCH-210ENST00000554835 PHLDB1Q86UU1 1377 aa30.52■■■□□ 2.48
PRKCH-210ENST00000554835 RAPGEF3O95398 923 aa30.49■■■□□ 2.47
PRKCH-210ENST00000554835 NEO1Q92859 1461 aa30.49■■■□□ 2.47
PRKCH-210ENST00000554835 FRMPD1Q5SYB0 1578 aa30.44■■■□□ 2.46
PRKCH-210ENST00000554835 EFCAB5A4FU69 1503 aa30.42■■■□□ 2.46
PRKCH-210ENST00000554835 PLEKHD1A6NEE1 506 aa30.39■■■□□ 2.46
PRKCH-210ENST00000554835 ILDR1Q86SU0 546 aaPredicted RBP30.38■■■□□ 2.45
PRKCH-210ENST00000554835 ADAMTSL3P82987 1691 aa30.36■■■□□ 2.45
PRKCH-210ENST00000554835 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.35■■■□□ 2.45
PRKCH-210ENST00000554835 TTC37Q6PGP7 1564 aa30.31■■■□□ 2.44
PRKCH-210ENST00000554835 CDK13Q14004 1512 aaKnown RBP30.31■■■□□ 2.44
PRKCH-210ENST00000554835 EHMT2Q96KQ7 1210 aa30.29■■■□□ 2.44
PRKCH-210ENST00000554835 RICTORQ6R327 1708 aa30.29■■■□□ 2.44
PRKCH-210ENST00000554835 AKNAQ7Z591 1439 aa30.29■■■□□ 2.44
PRKCH-210ENST00000554835 FANCAO15360 1455 aa30.28■■■□□ 2.44
PRKCH-210ENST00000554835 PTPRMP28827 1452 aa30.28■■■□□ 2.44
PRKCH-210ENST00000554835 DENND4BO75064 1496 aaPredicted RBP30.26■■■□□ 2.44
PRKCH-210ENST00000554835 BCORL1Q5H9F3 1711 aa30.26■■■□□ 2.43
PRKCH-210ENST00000554835 CHIC1Q5VXU3 224 aa30.24■■■□□ 2.43
PRKCH-210ENST00000554835 ARHGEF40Q8TER5 1519 aa30.23■■■□□ 2.43
PRKCH-210ENST00000554835 UBTFP17480 764 aaKnown RBP30.23■■■□□ 2.43
PRKCH-210ENST00000554835 CFAP74Q9C0B2 1584 aa30.21■■■□□ 2.43
PRKCH-210ENST00000554835 ARHGAP35Q9NRY4 1499 aa30.21■■■□□ 2.43
PRKCH-210ENST00000554835 MADDQ8WXG6 1647 aa30.21■■■□□ 2.43
PRKCH-210ENST00000554835 ARID4BQ4LE39 1312 aaPredicted RBP30.2■■■□□ 2.42
PRKCH-210ENST00000554835 ZMYM4Q5VZL5 1548 aa30.16■■■□□ 2.42
PRKCH-210ENST00000554835 FMN1Q68DA7 1419 aa30.14■■■□□ 2.42
PRKCH-210ENST00000554835 PLCH2O75038 1416 aa30.13■■■□□ 2.41
PRKCH-210ENST00000554835 YEATS2Q9ULM3 1422 aa30.13■■■□□ 2.41
PRKCH-210ENST00000554835 SIGLEC1Q9BZZ2 1709 aa30.13■■■□□ 2.41
PRKCH-210ENST00000554835 HECW1Q76N89 1606 aa30.12■■■□□ 2.41
PRKCH-210ENST00000554835 ATP1B4Q9UN42 357 aaPredicted RBP30.11■■■□□ 2.41
PRKCH-210ENST00000554835 ZFYVE16Q7Z3T8 1539 aa30.08■■■□□ 2.41
PRKCH-210ENST00000554835 RIMS1Q86UR5 1692 aaKnown RBP30.07■■■□□ 2.41
PRKCH-210ENST00000554835 SCAPERQ9BY12 1400 aa30.07■■■□□ 2.4
PRKCH-210ENST00000554835 KIF14Q15058 1648 aa30.06■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms