RNA–Protein interactions for RNA: ENST00000554774.1

XRCC3-207, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 510 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-207ENST00000554774 IGF1RP08069 1367 aa24.54■■□□□ 1.52
XRCC3-207ENST00000554774 CUL7Q14999 1698 aa24.51■■□□□ 1.51
XRCC3-207ENST00000554774 KIF13AQ9H1H9 1805 aa24.5■■□□□ 1.51
XRCC3-207ENST00000554774 AEBP2Q6ZN18 517 aaPredicted RBP24.49■■□□□ 1.51
XRCC3-207ENST00000554774 KIAA0586Q9BVV6 1533 aa24.48■■□□□ 1.51
XRCC3-207ENST00000554774 NPM1P06748 294 aaKnown RBP eCLIP24.46■■□□□ 1.51
XRCC3-207ENST00000554774 ADCY10Q96PN6 1610 aa24.41■■□□□ 1.5
XRCC3-207ENST00000554774 CARMIL1Q5VZK9 1371 aa24.4■■□□□ 1.5
XRCC3-207ENST00000554774 FAM69CQ0P6D2 419 aa24.38■■□□□ 1.49
XRCC3-207ENST00000554774 MAPKBP1O60336 1514 aa24.37■■□□□ 1.49
XRCC3-207ENST00000554774 ABCC10Q5T3U5 1492 aa24.37■■□□□ 1.49
XRCC3-207ENST00000554774 DIP2BQ9P265 1576 aa24.31■■□□□ 1.48
XRCC3-207ENST00000554774 TTBK1Q5TCY1 1321 aaPredicted RBP24.31■■□□□ 1.48
XRCC3-207ENST00000554774 PTPRGP23470 1445 aa24.29■■□□□ 1.48
XRCC3-207ENST00000554774 CARMIL2Q6F5E8 1435 aa24.27■■□□□ 1.48
XRCC3-207ENST00000554774 IQGAP2Q13576 1575 aa24.25■■□□□ 1.47
XRCC3-207ENST00000554774 TNIKQ9UKE5 1360 aa24.24■■□□□ 1.47
XRCC3-207ENST00000554774 TSPOAP1O95153 1857 aa24.2■■□□□ 1.46
XRCC3-207ENST00000554774 RAPGEF2Q9Y4G8 1499 aa24.16■■□□□ 1.46
XRCC3-207ENST00000554774 ABCC2Q92887 1545 aa24.15■■□□□ 1.46
XRCC3-207ENST00000554774 KDM6BO15054 1643 aa24.13■■□□□ 1.45
XRCC3-207ENST00000554774 DISP1Q96F81 1524 aa24.13■■□□□ 1.45
XRCC3-207ENST00000554774 UHRF1BP1LA0JNW5 1464 aa24.1■■□□□ 1.45
XRCC3-207ENST00000554774 UACAQ9BZF9 1416 aa24.1■■□□□ 1.45
XRCC3-207ENST00000554774 ASXL2Q76L83 1435 aa24.09■■□□□ 1.45
XRCC3-207ENST00000554774 UGGT2Q9NYU1 1516 aa24.08■■□□□ 1.45
XRCC3-207ENST00000554774 PLB1Q6P1J6 1458 aa24.07■■□□□ 1.44
XRCC3-207ENST00000554774 KIAA0556O60303 1618 aa24.03■■□□□ 1.44
XRCC3-207ENST00000554774 GLI2P10070 1586 aa24.02■■□□□ 1.44
XRCC3-207ENST00000554774 KDM5BQ9UGL1 1544 aa23.99■■□□□ 1.43
XRCC3-207ENST00000554774 CTTNBP2Q8WZ74 1663 aa23.99■■□□□ 1.43
XRCC3-207ENST00000554774 PPRC1Q5VV67 1664 aaKnown RBP23.98■■□□□ 1.43
XRCC3-207ENST00000554774 ZCCHC11Q5TAX3 1644 aaKnown RBP23.97■■□□□ 1.43
XRCC3-207ENST00000554774 EPRSP07814 1512 aaKnown RBP23.94■■□□□ 1.42
XRCC3-207ENST00000554774 KDM4FA0A1W2PPD8 638 aa23.92■■□□□ 1.42
XRCC3-207ENST00000554774 GOLGA3Q08378 1498 aa23.89■■□□□ 1.42
XRCC3-207ENST00000554774 MAP3K4Q9Y6R4 1608 aa23.89■■□□□ 1.42
XRCC3-207ENST00000554774 PRXQ9BXM0 1461 aa23.87■■□□□ 1.41
XRCC3-207ENST00000554774 TEX14Q8IWB6 1497 aa23.84■■□□□ 1.41
XRCC3-207ENST00000554774 WDR7Q9Y4E6 1490 aa23.84■■□□□ 1.41
XRCC3-207ENST00000554774 ABCA8O94911 1581 aa23.81■■□□□ 1.4
XRCC3-207ENST00000554774 COL17A1Q9UMD9 1497 aaPredicted RBP23.81■■□□□ 1.4
XRCC3-207ENST00000554774 KCNH8Q96L42 1107 aa23.77■■□□□ 1.4
XRCC3-207ENST00000554774 P3H3Q8IVL6 736 aa23.73■■□□□ 1.39
XRCC3-207ENST00000554774 FAM9AQ8IZU1 332 aaPredicted RBP23.72■■□□□ 1.39
XRCC3-207ENST00000554774 CD109Q6YHK3 1445 aa23.72■■□□□ 1.39
XRCC3-207ENST00000554774 ADGRL1O94910 1474 aa23.72■■□□□ 1.39
XRCC3-207ENST00000554774 CFAP43Q8NDM7 1665 aa23.72■■□□□ 1.39
XRCC3-207ENST00000554774 CSRNP3Q8WYN3 585 aa23.7■■□□□ 1.38
XRCC3-207ENST00000554774 ARID3CA6NKF2 412 aa23.68■■□□□ 1.38
XRCC3-207ENST00000554774 MAGI3Q5TCQ9 1506 aa23.68■■□□□ 1.38
XRCC3-207ENST00000554774 ATP10BO94823 1461 aa23.62■■□□□ 1.37
XRCC3-207ENST00000554774 SAMD9Q5K651 1589 aa23.61■■□□□ 1.37
XRCC3-207ENST00000554774 RANGAP1P46060 587 aaPredicted RBP23.56■■□□□ 1.36
XRCC3-207ENST00000554774 EEA1Q15075 1411 aa23.56■■□□□ 1.36
XRCC3-207ENST00000554774 RAPGEF6Q8TEU7 1601 aa23.55■■□□□ 1.36
XRCC3-207ENST00000554774 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.54■■□□□ 1.36
XRCC3-207ENST00000554774 HNRNPUL2Q1KMD3 747 aaKnown RBP23.54■■□□□ 1.36
XRCC3-207ENST00000554774 ABCA9Q8IUA7 1624 aa23.51■■□□□ 1.35
XRCC3-207ENST00000554774 ARAP3Q8WWN8 1544 aa23.49■■□□□ 1.35
XRCC3-207ENST00000554774 FHOD3Q2V2M9 1422 aa23.48■■□□□ 1.35
XRCC3-207ENST00000554774 KIF21BO75037 1637 aa23.47■■□□□ 1.35
XRCC3-207ENST00000554774 NUP153P49790 1475 aaKnown RBP23.45■■□□□ 1.34
XRCC3-207ENST00000554774 PHLDB1Q86UU1 1377 aa23.43■■□□□ 1.34
XRCC3-207ENST00000554774 HECW2Q9P2P5 1572 aa23.41■■□□□ 1.34
XRCC3-207ENST00000554774 NEO1Q92859 1461 aa23.39■■□□□ 1.34
XRCC3-207ENST00000554774 RAPGEF3O95398 923 aa23.39■■□□□ 1.33
XRCC3-207ENST00000554774 PLEKHD1A6NEE1 506 aa23.37■■□□□ 1.33
XRCC3-207ENST00000554774 EFCAB5A4FU69 1503 aa23.36■■□□□ 1.33
XRCC3-207ENST00000554774 EHMT2Q96KQ7 1210 aa23.32■■□□□ 1.32
XRCC3-207ENST00000554774 FRMPD1Q5SYB0 1578 aa23.3■■□□□ 1.32
XRCC3-207ENST00000554774 ILDR1Q86SU0 546 aaPredicted RBP23.28■■□□□ 1.32
XRCC3-207ENST00000554774 UBTFP17480 764 aaKnown RBP23.27■■□□□ 1.32
XRCC3-207ENST00000554774 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.27■■□□□ 1.32
XRCC3-207ENST00000554774 ADAMTSL3P82987 1691 aa23.25■■□□□ 1.31
XRCC3-207ENST00000554774 ARID4BQ4LE39 1312 aaPredicted RBP23.25■■□□□ 1.31
XRCC3-207ENST00000554774 AKNAQ7Z591 1439 aa23.25■■□□□ 1.31
XRCC3-207ENST00000554774 DENND4BO75064 1496 aaPredicted RBP23.24■■□□□ 1.31
XRCC3-207ENST00000554774 CDK13Q14004 1512 aaKnown RBP23.24■■□□□ 1.31
XRCC3-207ENST00000554774 CFAP74Q9C0B2 1584 aa23.24■■□□□ 1.31
XRCC3-207ENST00000554774 FANCAO15360 1455 aa23.24■■□□□ 1.31
XRCC3-207ENST00000554774 TTC37Q6PGP7 1564 aa23.23■■□□□ 1.31
XRCC3-207ENST00000554774 ATP1B4Q9UN42 357 aaPredicted RBP23.22■■□□□ 1.31
XRCC3-207ENST00000554774 PTPRMP28827 1452 aa23.22■■□□□ 1.31
XRCC3-207ENST00000554774 BCORL1Q5H9F3 1711 aa23.22■■□□□ 1.31
XRCC3-207ENST00000554774 RICTORQ6R327 1708 aa23.22■■□□□ 1.31
XRCC3-207ENST00000554774 ARHGEF40Q8TER5 1519 aa23.19■■□□□ 1.3
XRCC3-207ENST00000554774 CHIC1Q5VXU3 224 aa23.19■■□□□ 1.3
XRCC3-207ENST00000554774 MADDQ8WXG6 1647 aa23.17■■□□□ 1.3
XRCC3-207ENST00000554774 FMN1Q68DA7 1419 aa23.16■■□□□ 1.3
XRCC3-207ENST00000554774 HECW1Q76N89 1606 aa23.15■■□□□ 1.3
XRCC3-207ENST00000554774 ARHGAP35Q9NRY4 1499 aa23.15■■□□□ 1.3
XRCC3-207ENST00000554774 ZMYM4Q5VZL5 1548 aa23.12■■□□□ 1.29
XRCC3-207ENST00000554774 PLCH2O75038 1416 aa23.11■■□□□ 1.29
XRCC3-207ENST00000554774 ZFYVE16Q7Z3T8 1539 aa23.1■■□□□ 1.29
XRCC3-207ENST00000554774 RIMS1Q86UR5 1692 aaKnown RBP23.09■■□□□ 1.29
XRCC3-207ENST00000554774 CDK11AQ9UQ88 783 aaPredicted RBP23.09■■□□□ 1.29
XRCC3-207ENST00000554774 SCAPERQ9BY12 1400 aa23.08■■□□□ 1.29
XRCC3-207ENST00000554774 YEATS2Q9ULM3 1422 aa23.08■■□□□ 1.29
XRCC3-207ENST00000554774 MYO5CQ9NQX4 1742 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms