RNA–Protein interactions for RNA: ENST00000554732.5

LINC00639-202, long intergenic non-protein coding RNA 639, humanhuman

TSL 1 (best)

Gene LINC00639, Length 4,364 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00639-202ENST00000554732 BAZ1BQ9UIG0 1483 aaKnown RBP18.44■□□□□ 0.54
LINC00639-202ENST00000554732 PPM1GO15355 546 aaPredicted RBP18.44■□□□□ 0.54
LINC00639-202ENST00000554732 MROH2BQ7Z745 1585 aa18.41■□□□□ 0.54
LINC00639-202ENST00000554732 SIN3AQ96ST3 1273 aa18.41■□□□□ 0.54
LINC00639-202ENST00000554732 ARID3CA6NKF2 412 aa18.37■□□□□ 0.53
LINC00639-202ENST00000554732 TMC1Q8TDI8 760 aa18.37■□□□□ 0.53
LINC00639-202ENST00000554732 CANXP27824 592 aaKnown RBP18.36■□□□□ 0.53
LINC00639-202ENST00000554732 ARID4BQ4LE39 1312 aaPredicted RBP18.36■□□□□ 0.53
LINC00639-202ENST00000554732 WRNQ14191 1432 aaPredicted RBP eCLIP18.35■□□□□ 0.53
LINC00639-202ENST00000554732 SLC4A1APQ9BWU0 796 aaKnown RBP18.32■□□□□ 0.52
LINC00639-202ENST00000554732 DDRGK1Q96HY6 314 aa18.32■□□□□ 0.52
LINC00639-202ENST00000554732 ANP32BQ92688 251 aaKnown RBP18.31■□□□□ 0.52
LINC00639-202ENST00000554732 FANCIQ9NVI1 1328 aa18.3■□□□□ 0.52
LINC00639-202ENST00000554732 CLIP1P30622 1438 aa18.28■□□□□ 0.52
LINC00639-202ENST00000554732 TIMELESSQ9UNS1 1208 aa18.28■□□□□ 0.52
LINC00639-202ENST00000554732 IPO9Q96P70 1041 aaKnown RBP18.27■□□□□ 0.52
LINC00639-202ENST00000554732 IL27Q8NEV9 243 aa18.27■□□□□ 0.52
LINC00639-202ENST00000554732 UPF2Q9HAU5 1272 aaKnown RBP18.24■□□□□ 0.51
LINC00639-202ENST00000554732 HSP90AA1P07900 732 aaKnown RBP18.24■□□□□ 0.51
LINC00639-202ENST00000554732 CCER2I3L3R5 266 aa18.23■□□□□ 0.51
LINC00639-202ENST00000554732 EEA1Q15075 1411 aa18.23■□□□□ 0.51
LINC00639-202ENST00000554732 VSIG10Q8N0Z9 540 aa18.23■□□□□ 0.51
LINC00639-202ENST00000554732 TRIM44Q96DX7 344 aaPredicted RBP18.22■□□□□ 0.51
LINC00639-202ENST00000554732 EIF4G2P78344 907 aaKnown RBP eCLIP18.2■□□□□ 0.5
LINC00639-202ENST00000554732 CCDC88BA6NC98 1476 aa18.19■□□□□ 0.5
LINC00639-202ENST00000554732 MSH5O43196 834 aa18.19■□□□□ 0.5
LINC00639-202ENST00000554732 TNIKQ9UKE5 1360 aa18.17■□□□□ 0.5
LINC00639-202ENST00000554732 CHIC2Q9UKJ5 165 aa18.16■□□□□ 0.5
LINC00639-202ENST00000554732 RGS3P49796 1198 aa18.15■□□□□ 0.5
LINC00639-202ENST00000554732 GOLGA3Q08378 1498 aa18.14■□□□□ 0.49
LINC00639-202ENST00000554732 WIZO95785 1651 aa18.13■□□□□ 0.49
LINC00639-202ENST00000554732 PAK3O75914 559 aaPredicted RBP18.1■□□□□ 0.49
LINC00639-202ENST00000554732 SOGA1O94964 1423 aa18.1■□□□□ 0.49
LINC00639-202ENST00000554732 ZNF777Q9ULD5 760 aaPredicted RBP18.09■□□□□ 0.49
LINC00639-202ENST00000554732 BECN1Q14457 450 aa18.09■□□□□ 0.49
LINC00639-202ENST00000554732 KIF27Q86VH2 1401 aa18.09■□□□□ 0.49
LINC00639-202ENST00000554732 PNNQ9H307 717 aaKnown RBP18.08■□□□□ 0.48
LINC00639-202ENST00000554732 ARID3AQ99856 593 aa18.06■□□□□ 0.48
LINC00639-202ENST00000554732 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.05■□□□□ 0.48
LINC00639-202ENST00000554732 SLC4A3P48751 1232 aa18.05■□□□□ 0.48
LINC00639-202ENST00000554732 ABCC8Q09428 1581 aa18.04■□□□□ 0.48
LINC00639-202ENST00000554732 CHMP7Q8WUX9 453 aaPredicted RBP18.03■□□□□ 0.48
LINC00639-202ENST00000554732 SMARCA2P51531 1590 aa18.03■□□□□ 0.48
LINC00639-202ENST00000554732 CEP164Q9UPV0 1460 aa18.03■□□□□ 0.48
LINC00639-202ENST00000554732 PKNOX2Q96KN3 472 aa18.02■□□□□ 0.48
LINC00639-202ENST00000554732 GSE1Q14687 1217 aa18.02■□□□□ 0.48
LINC00639-202ENST00000554732 BRPF3Q9ULD4 1205 aa18.02■□□□□ 0.48
LINC00639-202ENST00000554732 HSP90AA2PQ14568 343 aaPredicted RBP18.02■□□□□ 0.48
LINC00639-202ENST00000554732 RSPH6AQ9H0K4 717 aa18.02■□□□□ 0.48
LINC00639-202ENST00000554732 GZF1Q9H116 711 aaPredicted RBP18.01■□□□□ 0.47
LINC00639-202ENST00000554732 TOP2AP11388 1531 aaKnown RBP18■□□□□ 0.47
LINC00639-202ENST00000554732 AMER1Q5JTC6 1135 aaPredicted RBP18■□□□□ 0.47
LINC00639-202ENST00000554732 SPRYD3Q8NCJ5 442 aa17.99■□□□□ 0.47
LINC00639-202ENST00000554732 SLKQ9H2G2 1235 aaPredicted RBP17.98■□□□□ 0.47
LINC00639-202ENST00000554732 RRP7BPQ9NSQ0 103 aa17.97■□□□□ 0.47
LINC00639-202ENST00000554732 USP35Q9P2H5 1018 aa17.97■□□□□ 0.47
LINC00639-202ENST00000554732 TNNT2P45379 298 aaPredicted RBP17.96■□□□□ 0.47
LINC00639-202ENST00000554732 KANK4Q5T7N3 995 aaPredicted RBP17.95■□□□□ 0.46
LINC00639-202ENST00000554732 ATAD2BQ9ULI0 1458 aa17.95■□□□□ 0.46
LINC00639-202ENST00000554732 MTUS2Q5JR59 1369 aa17.95■□□□□ 0.46
LINC00639-202ENST00000554732 KDM2AQ9Y2K7 1162 aa17.95■□□□□ 0.46
LINC00639-202ENST00000554732 L1TD1Q5T7N2 865 aaKnown RBP17.94■□□□□ 0.46
LINC00639-202ENST00000554732 TCERG1O14776 1098 aaKnown RBP17.93■□□□□ 0.46
LINC00639-202ENST00000554732 SMARCA4P51532 1647 aa17.93■□□□□ 0.46
LINC00639-202ENST00000554732 NCLP19338 710 aaKnown RBP17.93■□□□□ 0.46
LINC00639-202ENST00000554732 DHX57Q6P158 1386 aaKnown RBP17.92■□□□□ 0.46
LINC00639-202ENST00000554732 CCNB3Q8WWL7 1395 aa17.89■□□□□ 0.46
LINC00639-202ENST00000554732 HSPA5P11021 654 aaKnown RBP17.89■□□□□ 0.46
LINC00639-202ENST00000554732 PDE4AP27815 886 aa17.89■□□□□ 0.46
LINC00639-202ENST00000554732 DNTTIP2Q5QJE6 756 aaKnown RBP17.89■□□□□ 0.46
LINC00639-202ENST00000554732 CUX2O14529 1486 aa17.89■□□□□ 0.45
LINC00639-202ENST00000554732 WDR43Q15061 677 aaKnown RBP eCLIP17.89■□□□□ 0.45
LINC00639-202ENST00000554732 PPP1R15AO75807 674 aaPredicted RBP17.87■□□□□ 0.45
LINC00639-202ENST00000554732 CARMIL1Q5VZK9 1371 aa17.86■□□□□ 0.45
LINC00639-202ENST00000554732 ZBTB7CA1YPR0 619 aa17.84■□□□□ 0.45
LINC00639-202ENST00000554732 RAB3GAP2Q9H2M9 1393 aa17.83■□□□□ 0.44
LINC00639-202ENST00000554732 A0A0U1RQG5 324 aaPredicted RBP17.83■□□□□ 0.44
LINC00639-202ENST00000554732 NUDCQ9Y266 331 aa17.82■□□□□ 0.44
LINC00639-202ENST00000554732 PTMAP06454 111 aaKnown RBP17.82■□□□□ 0.44
LINC00639-202ENST00000554732 RCAN3Q9UKA8 241 aa17.81■□□□□ 0.44
LINC00639-202ENST00000554732 CADPSQ9ULU8 1353 aa17.8■□□□□ 0.44
LINC00639-202ENST00000554732 FRAT1Q92837 279 aaPredicted RBP17.8■□□□□ 0.44
LINC00639-202ENST00000554732 ERCC6Q03468 1493 aa17.79■□□□□ 0.44
LINC00639-202ENST00000554732 GOLGA6L22H0YM25 854 aa17.79■□□□□ 0.44
LINC00639-202ENST00000554732 GOLGA6L3A6NEY3 463 aa17.78■□□□□ 0.44
LINC00639-202ENST00000554732 NFKBIBQ15653 356 aa17.78■□□□□ 0.44
LINC00639-202ENST00000554732 VPS8Q8N3P4 1428 aa17.78■□□□□ 0.44
LINC00639-202ENST00000554732 TPRNQ4KMQ1 711 aa17.77■□□□□ 0.44
LINC00639-202ENST00000554732 MSNP26038 577 aaKnown RBP17.77■□□□□ 0.44
LINC00639-202ENST00000554732 UBE2Q2Q8WVN8 375 aa17.77■□□□□ 0.44
LINC00639-202ENST00000554732 CDK11BP21127 795 aaKnown RBP17.77■□□□□ 0.43
LINC00639-202ENST00000554732 EXOC6Q8TAG9 804 aa17.76■□□□□ 0.43
LINC00639-202ENST00000554732 NPM1P06748 294 aaKnown RBP eCLIP17.74■□□□□ 0.43
LINC00639-202ENST00000554732 PODXL2Q9NZ53 605 aa17.74■□□□□ 0.43
LINC00639-202ENST00000554732 TSPY4P0CV99 314 aa17.73■□□□□ 0.43
LINC00639-202ENST00000554732 TSPY10P0CW01 314 aa17.73■□□□□ 0.43
LINC00639-202ENST00000554732 SETD5Q9C0A6 1442 aa17.73■□□□□ 0.43
LINC00639-202ENST00000554732 TDRD9Q8NDG6 1382 aaKnown RBP17.72■□□□□ 0.43
LINC00639-202ENST00000554732 PDS5BQ9NTI5 1447 aa17.72■□□□□ 0.43
LINC00639-202ENST00000554732 MYH16Q9H6N6 1097 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms