RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 GRIN2BQ13224 1484 aa5.71□□□□□ -1.5
SEC23A-207ENST00000554615 TRIM26Q12899 539 aaPredicted RBP5.7□□□□□ -1.5
SEC23A-207ENST00000554615 URB2Q14146 1524 aaKnown RBP5.7□□□□□ -1.5
SEC23A-207ENST00000554615 AKNAQ7Z591 1439 aa5.69□□□□□ -1.5
SEC23A-207ENST00000554615 CADPSQ9ULU8 1353 aa5.69□□□□□ -1.5
SEC23A-207ENST00000554615 MAPKBP1O60336 1514 aa5.68□□□□□ -1.5
SEC23A-207ENST00000554615 NESP48681 1621 aa5.68□□□□□ -1.5
SEC23A-207ENST00000554615 POLA1P09884 1462 aaPredicted RBP5.67□□□□□ -1.5
SEC23A-207ENST00000554615 BCORL1Q5H9F3 1711 aa5.67□□□□□ -1.5
SEC23A-207ENST00000554615 CLSPNQ9HAW4 1339 aa5.66□□□□□ -1.5
SEC23A-207ENST00000554615 SUPT6HQ7KZ85 1726 aaKnown RBP5.65□□□□□ -1.5
SEC23A-207ENST00000554615 LAMC1P11047 1609 aa5.65□□□□□ -1.5
SEC23A-207ENST00000554615 KDM5DQ9BY66 1539 aa5.65□□□□□ -1.5
SEC23A-207ENST00000554615 NEURL4Q96JN8 1562 aa5.65□□□□□ -1.5
SEC23A-207ENST00000554615 E9PCH4 1651 aa5.64□□□□□ -1.51
SEC23A-207ENST00000554615 KIF27Q86VH2 1401 aa5.64□□□□□ -1.51
SEC23A-207ENST00000554615 CASKIN1Q8WXD9 1431 aa5.64□□□□□ -1.51
SEC23A-207ENST00000554615 MAST1Q9Y2H9 1570 aa5.64□□□□□ -1.51
SEC23A-207ENST00000554615 FANCD2Q9BXW9 1451 aa5.64□□□□□ -1.51
SEC23A-207ENST00000554615 ITSN2Q9NZM3 1697 aa5.64□□□□□ -1.51
SEC23A-207ENST00000554615 EHBP1L1Q8N3D4 1523 aa5.64□□□□□ -1.51
SEC23A-207ENST00000554615 CDC42BPAQ5VT25 1732 aa5.63□□□□□ -1.51
SEC23A-207ENST00000554615 KIAA0556O60303 1618 aa5.63□□□□□ -1.51
SEC23A-207ENST00000554615 IGF1RP08069 1367 aa5.63□□□□□ -1.51
SEC23A-207ENST00000554615 DNMT1P26358 1616 aaKnown RBP5.63□□□□□ -1.51
SEC23A-207ENST00000554615 LRRC9Q6ZRR7 1453 aa5.62□□□□□ -1.51
SEC23A-207ENST00000554615 ZEB1P37275 1124 aaPredicted RBP5.62□□□□□ -1.51
SEC23A-207ENST00000554615 EIF4G3O43432 1585 aaKnown RBP5.61□□□□□ -1.51
SEC23A-207ENST00000554615 PTPN23Q9H3S7 1636 aa5.61□□□□□ -1.51
SEC23A-207ENST00000554615 MAGI3Q5TCQ9 1506 aa5.61□□□□□ -1.51
SEC23A-207ENST00000554615 ABCA8O94911 1581 aa5.6□□□□□ -1.51
SEC23A-207ENST00000554615 DENND4BO75064 1496 aaPredicted RBP5.6□□□□□ -1.51
SEC23A-207ENST00000554615 CCDC18Q5T9S5 1454 aa5.59□□□□□ -1.51
SEC23A-207ENST00000554615 ARHGEF5Q12774 1597 aa5.58□□□□□ -1.52
SEC23A-207ENST00000554615 CSRNP3Q8WYN3 585 aa5.58□□□□□ -1.52
SEC23A-207ENST00000554615 DEPDC5O75140 1603 aa5.58□□□□□ -1.52
SEC23A-207ENST00000554615 RAPGEF6Q8TEU7 1601 aa5.57□□□□□ -1.52
SEC23A-207ENST00000554615 TRIM41Q8WV44 630 aa5.57□□□□□ -1.52
SEC23A-207ENST00000554615 UNC13BO14795 1591 aa5.57□□□□□ -1.52
SEC23A-207ENST00000554615 ADGRL2O95490 1459 aa5.57□□□□□ -1.52
SEC23A-207ENST00000554615 MRC2Q9UBG0 1479 aa5.57□□□□□ -1.52
SEC23A-207ENST00000554615 CEP170Q5SW79 1584 aa5.56□□□□□ -1.52
SEC23A-207ENST00000554615 IFT172Q9UG01 1749 aa5.56□□□□□ -1.52
SEC23A-207ENST00000554615 PLXNC1O60486 1568 aa5.56□□□□□ -1.52
SEC23A-207ENST00000554615 MBD5Q9P267 1494 aa5.56□□□□□ -1.52
SEC23A-207ENST00000554615 RNF17Q9BXT8 1623 aaKnown RBP5.56□□□□□ -1.52
SEC23A-207ENST00000554615 DISP1Q96F81 1524 aa5.56□□□□□ -1.52
SEC23A-207ENST00000554615 LOC105371045A0A1W2PR82 267 aa5.56□□□□□ -1.52
SEC23A-207ENST00000554615 PREX2Q70Z35 1606 aa5.56□□□□□ -1.52
SEC23A-207ENST00000554615 MAGI2Q86UL8 1455 aa5.55□□□□□ -1.52
SEC23A-207ENST00000554615 IFT140Q96RY7 1462 aa5.55□□□□□ -1.52
SEC23A-207ENST00000554615 FHAD1B1AJZ9 1412 aa5.54□□□□□ -1.52
SEC23A-207ENST00000554615 ARAP3Q8WWN8 1544 aa5.54□□□□□ -1.52
SEC23A-207ENST00000554615 SHANK2Q9UPX8 1470 aa5.54□□□□□ -1.52
SEC23A-207ENST00000554615 NUP160Q12769 1436 aa5.54□□□□□ -1.52
SEC23A-207ENST00000554615 MAGI1Q96QZ7 1491 aaPredicted RBP5.54□□□□□ -1.52
SEC23A-207ENST00000554615 CDC42BPBQ9Y5S2 1711 aa5.54□□□□□ -1.52
SEC23A-207ENST00000554615 CLASP1Q7Z460 1538 aa5.53□□□□□ -1.52
SEC23A-207ENST00000554615 KIAA1210Q9ULL0 1709 aa5.52□□□□□ -1.53
SEC23A-207ENST00000554615 DHX57Q6P158 1386 aaKnown RBP5.52□□□□□ -1.53
SEC23A-207ENST00000554615 MYO5CQ9NQX4 1742 aa5.51□□□□□ -1.53
SEC23A-207ENST00000554615 NCOA2Q15596 1464 aa5.51□□□□□ -1.53
SEC23A-207ENST00000554615 TEX14Q8IWB6 1497 aa5.51□□□□□ -1.53
SEC23A-207ENST00000554615 HFM1A2PYH4 1435 aa5.51□□□□□ -1.53
SEC23A-207ENST00000554615 MIA2Q96PC5 1412 aa5.51□□□□□ -1.53
SEC23A-207ENST00000554615 CEP152O94986 1710 aa5.5□□□□□ -1.53
SEC23A-207ENST00000554615 GAPVD1Q14C86 1478 aa5.5□□□□□ -1.53
SEC23A-207ENST00000554615 KDM6BO15054 1643 aa5.5□□□□□ -1.53
SEC23A-207ENST00000554615 KIF14Q15058 1648 aa5.5□□□□□ -1.53
SEC23A-207ENST00000554615 CHD1O14646 1710 aa5.5□□□□□ -1.53
SEC23A-207ENST00000554615 VWDEQ8N2E2 1590 aa5.5□□□□□ -1.53
SEC23A-207ENST00000554615 PPRC1Q5VV67 1664 aaKnown RBP5.5□□□□□ -1.53
SEC23A-207ENST00000554615 IQGAP3Q86VI3 1631 aa5.49□□□□□ -1.53
SEC23A-207ENST00000554615 ZC3H13Q5T200 1668 aaKnown RBP5.49□□□□□ -1.53
SEC23A-207ENST00000554615 EIF2AK4Q9P2K8 1649 aaKnown RBP5.49□□□□□ -1.53
SEC23A-207ENST00000554615 ABCC10Q5T3U5 1492 aa5.49□□□□□ -1.53
SEC23A-207ENST00000554615 ARHGEF12Q9NZN5 1544 aa5.49□□□□□ -1.53
SEC23A-207ENST00000554615 FMN1Q68DA7 1419 aa5.48□□□□□ -1.53
SEC23A-207ENST00000554615 PDS5BQ9NTI5 1447 aa5.48□□□□□ -1.53
SEC23A-207ENST00000554615 KIAA0586Q9BVV6 1533 aa5.48□□□□□ -1.53
SEC23A-207ENST00000554615 MYO3AQ8NEV4 1616 aa5.48□□□□□ -1.53
SEC23A-207ENST00000554615 ZMYM4Q5VZL5 1548 aa5.48□□□□□ -1.53
SEC23A-207ENST00000554615 PTPRGP23470 1445 aa5.48□□□□□ -1.53
SEC23A-207ENST00000554615 ROCK1Q13464 1354 aa5.47□□□□□ -1.53
SEC23A-207ENST00000554615 ABCA9Q8IUA7 1624 aa5.47□□□□□ -1.53
SEC23A-207ENST00000554615 CARMIL1Q5VZK9 1371 aa5.46□□□□□ -1.54
SEC23A-207ENST00000554615 RAD54L2Q9Y4B4 1467 aa5.46□□□□□ -1.54
SEC23A-207ENST00000554615 EPRSP07814 1512 aaKnown RBP5.46□□□□□ -1.54
SEC23A-207ENST00000554615 UHRF1BP1LA0JNW5 1464 aa5.46□□□□□ -1.54
SEC23A-207ENST00000554615 GRIN2AQ12879 1464 aa5.46□□□□□ -1.54
SEC23A-207ENST00000554615 IQGAP1P46940 1657 aa5.46□□□□□ -1.54
SEC23A-207ENST00000554615 WDR7Q9Y4E6 1490 aa5.45□□□□□ -1.54
SEC23A-207ENST00000554615 TRPM1Q7Z4N2 1603 aa5.45□□□□□ -1.54
SEC23A-207ENST00000554615 FGD6Q6ZV73 1430 aa5.45□□□□□ -1.54
SEC23A-207ENST00000554615 ATP10AO60312 1499 aa5.45□□□□□ -1.54
SEC23A-207ENST00000554615 NUP153P49790 1475 aaKnown RBP5.45□□□□□ -1.54
SEC23A-207ENST00000554615 KDM5CP41229 1560 aa5.45□□□□□ -1.54
SEC23A-207ENST00000554615 SPHKAPQ2M3C7 1700 aa5.44□□□□□ -1.54
SEC23A-207ENST00000554615 ABCA6Q8N139 1617 aa5.44□□□□□ -1.54
SEC23A-207ENST00000554615 SYNJ2O15056 1496 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms