RNA–Protein interactions for RNA: ENST00000554556.5

GABRB3-206, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-206ENST00000554556 IGF1RP08069 1367 aa38.89■■■■□ 3.82
GABRB3-206ENST00000554556 CUL7Q14999 1698 aa38.84■■■■□ 3.81
GABRB3-206ENST00000554556 KIAA0586Q9BVV6 1533 aa38.81■■■■□ 3.8
GABRB3-206ENST00000554556 NPM1P06748 294 aaKnown RBP eCLIP38.79■■■■□ 3.8
GABRB3-206ENST00000554556 AEBP2Q6ZN18 517 aaPredicted RBP38.74■■■■□ 3.79
GABRB3-206ENST00000554556 KIF13AQ9H1H9 1805 aa38.73■■■■□ 3.79
GABRB3-206ENST00000554556 CARMIL1Q5VZK9 1371 aa38.67■■■■□ 3.78
GABRB3-206ENST00000554556 FAM69CQ0P6D2 419 aa38.59■■■■□ 3.77
GABRB3-206ENST00000554556 ADCY10Q96PN6 1610 aa38.59■■■■□ 3.77
GABRB3-206ENST00000554556 MAPKBP1O60336 1514 aa38.58■■■■□ 3.77
GABRB3-206ENST00000554556 ABCC10Q5T3U5 1492 aa38.58■■■■□ 3.77
GABRB3-206ENST00000554556 PTPRGP23470 1445 aa38.49■■■■□ 3.75
GABRB3-206ENST00000554556 CARMIL2Q6F5E8 1435 aa38.48■■■■□ 3.75
GABRB3-206ENST00000554556 DIP2BQ9P265 1576 aa38.44■■■■□ 3.74
GABRB3-206ENST00000554556 TNIKQ9UKE5 1360 aa38.41■■■■□ 3.74
GABRB3-206ENST00000554556 IQGAP2Q13576 1575 aa38.4■■■■□ 3.74
GABRB3-206ENST00000554556 TTBK1Q5TCY1 1321 aaPredicted RBP38.39■■■■□ 3.74
GABRB3-206ENST00000554556 RAPGEF2Q9Y4G8 1499 aa38.29■■■■□ 3.72
GABRB3-206ENST00000554556 ABCC2Q92887 1545 aa38.25■■■■□ 3.71
GABRB3-206ENST00000554556 TSPOAP1O95153 1857 aa38.24■■■■□ 3.71
GABRB3-206ENST00000554556 DISP1Q96F81 1524 aa38.19■■■■□ 3.7
GABRB3-206ENST00000554556 UHRF1BP1LA0JNW5 1464 aa38.19■■■■□ 3.7
GABRB3-206ENST00000554556 KDM6BO15054 1643 aa38.17■■■■□ 3.7
GABRB3-206ENST00000554556 UACAQ9BZF9 1416 aa38.17■■■■□ 3.7
GABRB3-206ENST00000554556 UGGT2Q9NYU1 1516 aa38.16■■■■□ 3.7
GABRB3-206ENST00000554556 PLB1Q6P1J6 1458 aa38.15■■■■□ 3.7
GABRB3-206ENST00000554556 ASXL2Q76L83 1435 aa38.12■■■■□ 3.69
GABRB3-206ENST00000554556 GLI2P10070 1586 aa38.04■■■■□ 3.68
GABRB3-206ENST00000554556 KIAA0556O60303 1618 aa38.03■■■■□ 3.68
GABRB3-206ENST00000554556 KDM5BQ9UGL1 1544 aa38■■■■□ 3.67
GABRB3-206ENST00000554556 CTTNBP2Q8WZ74 1663 aa37.98■■■■□ 3.67
GABRB3-206ENST00000554556 ZCCHC11Q5TAX3 1644 aaKnown RBP37.91■■■■□ 3.66
GABRB3-206ENST00000554556 GOLGA3Q08378 1498 aa37.9■■■■□ 3.66
GABRB3-206ENST00000554556 PPRC1Q5VV67 1664 aaKnown RBP37.89■■■■□ 3.66
GABRB3-206ENST00000554556 EPRSP07814 1512 aaKnown RBP37.89■■■■□ 3.66
GABRB3-206ENST00000554556 PRXQ9BXM0 1461 aa37.84■■■■□ 3.65
GABRB3-206ENST00000554556 KDM4FA0A1W2PPD8 638 aa37.81■■■■□ 3.64
GABRB3-206ENST00000554556 MAP3K4Q9Y6R4 1608 aa37.8■■■■□ 3.64
GABRB3-206ENST00000554556 TEX14Q8IWB6 1497 aa37.78■■■■□ 3.64
GABRB3-206ENST00000554556 WDR7Q9Y4E6 1490 aa37.75■■■■□ 3.63
GABRB3-206ENST00000554556 FAM9AQ8IZU1 332 aaPredicted RBP37.74■■■■□ 3.63
GABRB3-206ENST00000554556 ABCA8O94911 1581 aa37.7■■■■□ 3.63
GABRB3-206ENST00000554556 COL17A1Q9UMD9 1497 aaPredicted RBP37.64■■■■□ 3.62
GABRB3-206ENST00000554556 CSRNP3Q8WYN3 585 aa37.61■■■■□ 3.61
GABRB3-206ENST00000554556 KCNH8Q96L42 1107 aa37.61■■■■□ 3.61
GABRB3-206ENST00000554556 CD109Q6YHK3 1445 aa37.56■■■■□ 3.6
GABRB3-206ENST00000554556 CFAP43Q8NDM7 1665 aa37.56■■■■□ 3.6
GABRB3-206ENST00000554556 P3H3Q8IVL6 736 aa37.54■■■■□ 3.6
GABRB3-206ENST00000554556 MAGI3Q5TCQ9 1506 aa37.51■■■■□ 3.6
GABRB3-206ENST00000554556 ADGRL1O94910 1474 aa37.48■■■■□ 3.59
GABRB3-206ENST00000554556 EEA1Q15075 1411 aa37.44■■■■□ 3.58
GABRB3-206ENST00000554556 ATP10BO94823 1461 aa37.41■■■■□ 3.58
GABRB3-206ENST00000554556 ARID3CA6NKF2 412 aa37.41■■■■□ 3.58
GABRB3-206ENST00000554556 SAMD9Q5K651 1589 aa37.38■■■■□ 3.58
GABRB3-206ENST00000554556 RAPGEF6Q8TEU7 1601 aa37.3■■■■□ 3.56
GABRB3-206ENST00000554556 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.27■■■■□ 3.56
GABRB3-206ENST00000554556 HNRNPUL2Q1KMD3 747 aaKnown RBP37.27■■■■□ 3.56
GABRB3-206ENST00000554556 RANGAP1P46060 587 aaPredicted RBP37.24■■■■□ 3.55
GABRB3-206ENST00000554556 ABCA9Q8IUA7 1624 aa37.23■■■■□ 3.55
GABRB3-206ENST00000554556 ARAP3Q8WWN8 1544 aa37.23■■■■□ 3.55
GABRB3-206ENST00000554556 PHLDB1Q86UU1 1377 aa37.22■■■■□ 3.55
GABRB3-206ENST00000554556 FHOD3Q2V2M9 1422 aa37.14■■■■□ 3.54
GABRB3-206ENST00000554556 NUP153P49790 1475 aaKnown RBP37.13■■■■□ 3.53
GABRB3-206ENST00000554556 KIF21BO75037 1637 aa37.09■■■■□ 3.53
GABRB3-206ENST00000554556 PLEKHD1A6NEE1 506 aa37.08■■■■□ 3.53
GABRB3-206ENST00000554556 NEO1Q92859 1461 aa37.07■■■■□ 3.53
GABRB3-206ENST00000554556 EFCAB5A4FU69 1503 aa37.05■■■■□ 3.52
GABRB3-206ENST00000554556 RAPGEF3O95398 923 aa37■■■■□ 3.51
GABRB3-206ENST00000554556 HECW2Q9P2P5 1572 aa36.98■■■■□ 3.51
GABRB3-206ENST00000554556 UBTFP17480 764 aaKnown RBP36.9■■■■□ 3.5
GABRB3-206ENST00000554556 FRMPD1Q5SYB0 1578 aa36.83■■■■□ 3.49
GABRB3-206ENST00000554556 CFAP74Q9C0B2 1584 aa36.83■■■■□ 3.49
GABRB3-206ENST00000554556 DENND4BO75064 1496 aaPredicted RBP36.82■■■■□ 3.49
GABRB3-206ENST00000554556 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.82■■■■□ 3.48
GABRB3-206ENST00000554556 EHMT2Q96KQ7 1210 aa36.82■■■■□ 3.48
GABRB3-206ENST00000554556 AKNAQ7Z591 1439 aa36.82■■■■□ 3.48
GABRB3-206ENST00000554556 FANCAO15360 1455 aa36.81■■■■□ 3.48
GABRB3-206ENST00000554556 ARID4BQ4LE39 1312 aaPredicted RBP36.8■■■■□ 3.48
GABRB3-206ENST00000554556 ADAMTSL3P82987 1691 aa36.8■■■■□ 3.48
GABRB3-206ENST00000554556 CHIC1Q5VXU3 224 aa36.79■■■■□ 3.48
GABRB3-206ENST00000554556 FMN1Q68DA7 1419 aa36.76■■■■□ 3.47
GABRB3-206ENST00000554556 CDK13Q14004 1512 aaKnown RBP36.75■■■■□ 3.47
GABRB3-206ENST00000554556 ILDR1Q86SU0 546 aaPredicted RBP36.75■■■■□ 3.47
GABRB3-206ENST00000554556 ATP1B4Q9UN42 357 aaPredicted RBP36.75■■■■□ 3.47
GABRB3-206ENST00000554556 RICTORQ6R327 1708 aa36.74■■■■□ 3.47
GABRB3-206ENST00000554556 PTPRMP28827 1452 aa36.73■■■■□ 3.47
GABRB3-206ENST00000554556 TTC37Q6PGP7 1564 aa36.73■■■■□ 3.47
GABRB3-206ENST00000554556 BCORL1Q5H9F3 1711 aa36.72■■■■□ 3.47
GABRB3-206ENST00000554556 CDK11AQ9UQ88 783 aaPredicted RBP36.69■■■■□ 3.46
GABRB3-206ENST00000554556 HECW1Q76N89 1606 aa36.68■■■■□ 3.46
GABRB3-206ENST00000554556 ARHGEF40Q8TER5 1519 aa36.68■■■■□ 3.46
GABRB3-206ENST00000554556 ARHGAP35Q9NRY4 1499 aa36.67■■■■□ 3.46
GABRB3-206ENST00000554556 PLCH2O75038 1416 aa36.64■■■■□ 3.46
GABRB3-206ENST00000554556 MADDQ8WXG6 1647 aa36.61■■■■□ 3.45
GABRB3-206ENST00000554556 ZMYM4Q5VZL5 1548 aa36.6■■■■□ 3.45
GABRB3-206ENST00000554556 MAGI2Q86UL8 1455 aa36.58■■■■□ 3.45
GABRB3-206ENST00000554556 POGZQ7Z3K3 1410 aa36.57■■■■□ 3.44
GABRB3-206ENST00000554556 ZFYVE16Q7Z3T8 1539 aa36.56■■■■□ 3.44
GABRB3-206ENST00000554556 SCAPERQ9BY12 1400 aa36.56■■■■□ 3.44
GABRB3-206ENST00000554556 EFCAB2Q5VUJ9 269 aa36.55■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms