RNA–Protein interactions for RNA: ENST00000554511.1

PPP4R3A-203, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 3

Gene PPP4R3A, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-203ENST00000554511 CSRNP3Q8WYN3 585 aa30.06■■■□□ 2.4
PPP4R3A-203ENST00000554511 FAM9AQ8IZU1 332 aaPredicted RBP30.05■■■□□ 2.4
PPP4R3A-203ENST00000554511 SHROOM2Q13796 1616 aa30■■■□□ 2.39
PPP4R3A-203ENST00000554511 CARMIL1Q5VZK9 1371 aa29.95■■■□□ 2.39
PPP4R3A-203ENST00000554511 CUL7Q14999 1698 aa29.92■■■□□ 2.38
PPP4R3A-203ENST00000554511 JPH4Q96JJ6 628 aa29.91■■■□□ 2.38
PPP4R3A-203ENST00000554511 PRG4Q92954 1404 aaPredicted RBP29.89■■■□□ 2.38
PPP4R3A-203ENST00000554511 RAPGEF2Q9Y4G8 1499 aa29.82■■■□□ 2.36
PPP4R3A-203ENST00000554511 PRXQ9BXM0 1461 aa29.81■■■□□ 2.36
PPP4R3A-203ENST00000554511 KIF21BO75037 1637 aa29.7■■■□□ 2.34
PPP4R3A-203ENST00000554511 KIAA0586Q9BVV6 1533 aa29.7■■■□□ 2.34
PPP4R3A-203ENST00000554511 GOLGA3Q08378 1498 aa29.64■■■□□ 2.34
PPP4R3A-203ENST00000554511 UBTFP17480 764 aaKnown RBP29.61■■■□□ 2.33
PPP4R3A-203ENST00000554511 NPM1P06748 294 aaKnown RBP eCLIP29.59■■■□□ 2.33
PPP4R3A-203ENST00000554511 EHMT2Q96KQ7 1210 aa29.58■■■□□ 2.33
PPP4R3A-203ENST00000554511 KIF13AQ9H1H9 1805 aa29.52■■■□□ 2.32
PPP4R3A-203ENST00000554511 ADCY10Q96PN6 1610 aa29.5■■■□□ 2.31
PPP4R3A-203ENST00000554511 FAM69CQ0P6D2 419 aa29.48■■■□□ 2.31
PPP4R3A-203ENST00000554511 MAPKBP1O60336 1514 aa29.46■■■□□ 2.31
PPP4R3A-203ENST00000554511 ABCC10Q5T3U5 1492 aa29.46■■■□□ 2.31
PPP4R3A-203ENST00000554511 PTPRGP23470 1445 aa29.45■■■□□ 2.3
PPP4R3A-203ENST00000554511 LOC105371045A0A1W2PR82 267 aa29.44■■■□□ 2.3
PPP4R3A-203ENST00000554511 TTBK1Q5TCY1 1321 aaPredicted RBP29.43■■■□□ 2.3
PPP4R3A-203ENST00000554511 CARMIL2Q6F5E8 1435 aa29.42■■■□□ 2.3
PPP4R3A-203ENST00000554511 TNIKQ9UKE5 1360 aa29.4■■■□□ 2.3
PPP4R3A-203ENST00000554511 AEBP2Q6ZN18 517 aaPredicted RBP29.4■■■□□ 2.3
PPP4R3A-203ENST00000554511 IQGAP2Q13576 1575 aa29.39■■■□□ 2.3
PPP4R3A-203ENST00000554511 CTTNBP2Q8WZ74 1663 aa29.39■■■□□ 2.3
PPP4R3A-203ENST00000554511 DIP2BQ9P265 1576 aa29.36■■■□□ 2.29
PPP4R3A-203ENST00000554511 DISP1Q96F81 1524 aa29.28■■■□□ 2.28
PPP4R3A-203ENST00000554511 RANGAP1P46060 587 aaPredicted RBP29.26■■■□□ 2.27
PPP4R3A-203ENST00000554511 ABCC2Q92887 1545 aa29.25■■■□□ 2.27
PPP4R3A-203ENST00000554511 UGGT2Q9NYU1 1516 aa29.25■■■□□ 2.27
PPP4R3A-203ENST00000554511 UACAQ9BZF9 1416 aa29.21■■■□□ 2.27
PPP4R3A-203ENST00000554511 UHRF1BP1LA0JNW5 1464 aa29.2■■■□□ 2.26
PPP4R3A-203ENST00000554511 ASXL2Q76L83 1435 aa29.16■■■□□ 2.26
PPP4R3A-203ENST00000554511 TSPOAP1O95153 1857 aa29.14■■■□□ 2.26
PPP4R3A-203ENST00000554511 PLB1Q6P1J6 1458 aa29.14■■■□□ 2.26
PPP4R3A-203ENST00000554511 KIAA0556O60303 1618 aa29.13■■■□□ 2.25
PPP4R3A-203ENST00000554511 EFCAB5A4FU69 1503 aa29.13■■■□□ 2.25
PPP4R3A-203ENST00000554511 CLIP1P30622 1438 aa29.12■■■□□ 2.25
PPP4R3A-203ENST00000554511 CEP162Q5TB80 1403 aa29.11■■■□□ 2.25
PPP4R3A-203ENST00000554511 KDM6BO15054 1643 aa29.1■■■□□ 2.25
PPP4R3A-203ENST00000554511 P3H3Q8IVL6 736 aa29.09■■■□□ 2.25
PPP4R3A-203ENST00000554511 KDM5BQ9UGL1 1544 aa29.07■■■□□ 2.24
PPP4R3A-203ENST00000554511 SAMD9Q5K651 1589 aa29.06■■■□□ 2.24
PPP4R3A-203ENST00000554511 GLI2P10070 1586 aa29.05■■■□□ 2.24
PPP4R3A-203ENST00000554511 ARHGAP35Q9NRY4 1499 aa29.02■■■□□ 2.24
PPP4R3A-203ENST00000554511 ZCCHC11Q5TAX3 1644 aaKnown RBP28.98■■■□□ 2.23
PPP4R3A-203ENST00000554511 EPRSP07814 1512 aaKnown RBP28.98■■■□□ 2.23
PPP4R3A-203ENST00000554511 FHOD3Q2V2M9 1422 aa28.95■■■□□ 2.23
PPP4R3A-203ENST00000554511 PPRC1Q5VV67 1664 aaKnown RBP28.95■■■□□ 2.22
PPP4R3A-203ENST00000554511 FMN1Q68DA7 1419 aa28.92■■■□□ 2.22
PPP4R3A-203ENST00000554511 MAP3K4Q9Y6R4 1608 aa28.87■■■□□ 2.21
PPP4R3A-203ENST00000554511 WDR7Q9Y4E6 1490 aa28.87■■■□□ 2.21
PPP4R3A-203ENST00000554511 ABCA8O94911 1581 aa28.87■■■□□ 2.21
PPP4R3A-203ENST00000554511 KDM4FA0A1W2PPD8 638 aa28.85■■■□□ 2.21
PPP4R3A-203ENST00000554511 TEX14Q8IWB6 1497 aa28.82■■■□□ 2.2
PPP4R3A-203ENST00000554511 COL17A1Q9UMD9 1497 aaPredicted RBP28.81■■■□□ 2.2
PPP4R3A-203ENST00000554511 KCNH8Q96L42 1107 aa28.79■■■□□ 2.2
PPP4R3A-203ENST00000554511 ATP1B4Q9UN42 357 aaPredicted RBP28.75■■■□□ 2.19
PPP4R3A-203ENST00000554511 VPS8Q8N3P4 1428 aa28.74■■■□□ 2.19
PPP4R3A-203ENST00000554511 ARID3CA6NKF2 412 aa28.72■■■□□ 2.19
PPP4R3A-203ENST00000554511 CD109Q6YHK3 1445 aa28.71■■■□□ 2.19
PPP4R3A-203ENST00000554511 CASKIN1Q8WXD9 1431 aa28.7■■■□□ 2.19
PPP4R3A-203ENST00000554511 RAPGEF6Q8TEU7 1601 aa28.69■■■□□ 2.18
PPP4R3A-203ENST00000554511 MAGI3Q5TCQ9 1506 aa28.67■■■□□ 2.18
PPP4R3A-203ENST00000554511 ATP10BO94823 1461 aa28.66■■■□□ 2.18
PPP4R3A-203ENST00000554511 CFAP43Q8NDM7 1665 aa28.66■■■□□ 2.18
PPP4R3A-203ENST00000554511 FYCO1Q9BQS8 1478 aa28.66■■■□□ 2.18
PPP4R3A-203ENST00000554511 HECW1Q76N89 1606 aa28.62■■■□□ 2.17
PPP4R3A-203ENST00000554511 APLP2Q06481 763 aa28.62■■■□□ 2.17
PPP4R3A-203ENST00000554511 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.61■■■□□ 2.17
PPP4R3A-203ENST00000554511 HNRNPUL2Q1KMD3 747 aaKnown RBP28.61■■■□□ 2.17
PPP4R3A-203ENST00000554511 ADGRL1O94910 1474 aa28.59■■■□□ 2.17
PPP4R3A-203ENST00000554511 PCF11O94913 1555 aaKnown RBP28.58■■■□□ 2.17
PPP4R3A-203ENST00000554511 NUP153P49790 1475 aaKnown RBP28.58■■■□□ 2.17
PPP4R3A-203ENST00000554511 CDK11AQ9UQ88 783 aaPredicted RBP28.57■■■□□ 2.16
PPP4R3A-203ENST00000554511 CCDC18Q5T9S5 1454 aa28.55■■■□□ 2.16
PPP4R3A-203ENST00000554511 PLEKHD1A6NEE1 506 aa28.49■■■□□ 2.15
PPP4R3A-203ENST00000554511 ABCA9Q8IUA7 1624 aa28.47■■■□□ 2.15
PPP4R3A-203ENST00000554511 ARAP3Q8WWN8 1544 aa28.44■■■□□ 2.14
PPP4R3A-203ENST00000554511 MAP3K1Q13233 1512 aa28.43■■■□□ 2.14
PPP4R3A-203ENST00000554511 CDK13Q14004 1512 aaKnown RBP28.42■■■□□ 2.14
PPP4R3A-203ENST00000554511 PHLDB1Q86UU1 1377 aa28.4■■■□□ 2.14
PPP4R3A-203ENST00000554511 TIAM1Q13009 1591 aa28.35■■■□□ 2.13
PPP4R3A-203ENST00000554511 MTUS2Q5JR59 1369 aa28.35■■■□□ 2.13
PPP4R3A-203ENST00000554511 LRRIQ1Q96JM4 1722 aa28.35■■■□□ 2.13
PPP4R3A-203ENST00000554511 NEO1Q92859 1461 aa28.34■■■□□ 2.13
PPP4R3A-203ENST00000554511 RAPGEF3O95398 923 aa28.33■■■□□ 2.13
PPP4R3A-203ENST00000554511 TROQ12816 1431 aaPredicted RBP28.3■■■□□ 2.12
PPP4R3A-203ENST00000554511 LRRC9Q6ZRR7 1453 aa28.27■■■□□ 2.12
PPP4R3A-203ENST00000554511 KANK4Q5T7N3 995 aaPredicted RBP28.24■■■□□ 2.11
PPP4R3A-203ENST00000554511 EHBP1L1Q8N3D4 1523 aa28.23■■■□□ 2.11
PPP4R3A-203ENST00000554511 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.21■■■□□ 2.111e-11■■■□□ 16.7
PPP4R3A-203ENST00000554511 FRMPD1Q5SYB0 1578 aa28.19■■■□□ 2.1
PPP4R3A-203ENST00000554511 AKNAQ7Z591 1439 aa28.18■■■□□ 2.1
PPP4R3A-203ENST00000554511 HECW2Q9P2P5 1572 aa28.17■■■□□ 2.1
PPP4R3A-203ENST00000554511 FANCAO15360 1455 aa28.17■■■□□ 2.1
PPP4R3A-203ENST00000554511 KIF14Q15058 1648 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms