RNA–Protein interactions for RNA: ENST00000554329.6

TMEM253-203, Transcript of transmembrane protein 253, humanhuman

APPRIS ALT2 TSL 5

Gene TMEM253, Length 786 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-203ENST00000554329 SHROOM2Q13796 1616 aa19.8■□□□□ 0.76
TMEM253-203ENST00000554329 CARMIL1Q5VZK9 1371 aa19.79■□□□□ 0.76
TMEM253-203ENST00000554329 PRG4Q92954 1404 aaPredicted RBP19.76■□□□□ 0.75
TMEM253-203ENST00000554329 JPH4Q96JJ6 628 aa19.73■□□□□ 0.75
TMEM253-203ENST00000554329 TTBK1Q5TCY1 1321 aaPredicted RBP19.69■□□□□ 0.74
TMEM253-203ENST00000554329 TRHP20396 242 aaPredicted RBP19.68■□□□□ 0.74
TMEM253-203ENST00000554329 KIAA0586Q9BVV6 1533 aa19.66■□□□□ 0.74
TMEM253-203ENST00000554329 RAPGEF2Q9Y4G8 1499 aa19.64■□□□□ 0.73
TMEM253-203ENST00000554329 FAM9AQ8IZU1 332 aaPredicted RBP19.63■□□□□ 0.73
TMEM253-203ENST00000554329 IQGAP2Q13576 1575 aa19.61■□□□□ 0.73
TMEM253-203ENST00000554329 CTTNBP2Q8WZ74 1663 aa19.55■□□□□ 0.72
TMEM253-203ENST00000554329 EHMT2Q96KQ7 1210 aa19.54■□□□□ 0.72
TMEM253-203ENST00000554329 PRXQ9BXM0 1461 aa19.53■□□□□ 0.72
TMEM253-203ENST00000554329 ADCY10Q96PN6 1610 aa19.52■□□□□ 0.72
TMEM253-203ENST00000554329 DISP1Q96F81 1524 aa19.51■□□□□ 0.71
TMEM253-203ENST00000554329 CSRNP3Q8WYN3 585 aa19.48■□□□□ 0.71
TMEM253-203ENST00000554329 PTPRGP23470 1445 aa19.45■□□□□ 0.7
TMEM253-203ENST00000554329 CARMIL2Q6F5E8 1435 aa19.45■□□□□ 0.7
TMEM253-203ENST00000554329 KIAA0556O60303 1618 aa19.45■□□□□ 0.7
TMEM253-203ENST00000554329 UGGT2Q9NYU1 1516 aa19.45■□□□□ 0.7
TMEM253-203ENST00000554329 RANGAP1P46060 587 aaPredicted RBP19.44■□□□□ 0.7
TMEM253-203ENST00000554329 TNIKQ9UKE5 1360 aa19.44■□□□□ 0.7
TMEM253-203ENST00000554329 KIF13AQ9H1H9 1805 aa19.4■□□□□ 0.7
TMEM253-203ENST00000554329 P3H3Q8IVL6 736 aa19.4■□□□□ 0.7
TMEM253-203ENST00000554329 EEA1Q15075 1411 aa19.35■□□□□ 0.69
TMEM253-203ENST00000554329 NPM1P06748 294 aaKnown RBP eCLIP19.35■□□□□ 0.69
TMEM253-203ENST00000554329 PLB1Q6P1J6 1458 aa19.32■□□□□ 0.68
TMEM253-203ENST00000554329 UACAQ9BZF9 1416 aa19.31■□□□□ 0.68
TMEM253-203ENST00000554329 ARID3CA6NKF2 412 aa19.3■□□□□ 0.68
TMEM253-203ENST00000554329 DIP2BQ9P265 1576 aa19.3■□□□□ 0.68
TMEM253-203ENST00000554329 MAPKBP1O60336 1514 aa19.3■□□□□ 0.68
TMEM253-203ENST00000554329 ABCC2Q92887 1545 aa19.3■□□□□ 0.68
TMEM253-203ENST00000554329 KIF21BO75037 1637 aa19.29■□□□□ 0.68
TMEM253-203ENST00000554329 FAM69CQ0P6D2 419 aa19.29■□□□□ 0.68
TMEM253-203ENST00000554329 TSPOAP1O95153 1857 aa19.28■□□□□ 0.68
TMEM253-203ENST00000554329 ZCCHC11Q5TAX3 1644 aaKnown RBP19.28■□□□□ 0.68
TMEM253-203ENST00000554329 GOLGA3Q08378 1498 aa19.27■□□□□ 0.67
TMEM253-203ENST00000554329 ABCC10Q5T3U5 1492 aa19.26■□□□□ 0.67
TMEM253-203ENST00000554329 SAMD9Q5K651 1589 aa19.24■□□□□ 0.67
TMEM253-203ENST00000554329 UHRF1BP1LA0JNW5 1464 aa19.24■□□□□ 0.67
TMEM253-203ENST00000554329 ASXL2Q76L83 1435 aa19.24■□□□□ 0.67
TMEM253-203ENST00000554329 FHOD3Q2V2M9 1422 aa19.22■□□□□ 0.67
TMEM253-203ENST00000554329 ABCA8O94911 1581 aa19.22■□□□□ 0.67
TMEM253-203ENST00000554329 UBTFP17480 764 aaKnown RBP19.2■□□□□ 0.66
TMEM253-203ENST00000554329 KDM5BQ9UGL1 1544 aa19.19■□□□□ 0.66
TMEM253-203ENST00000554329 PPRC1Q5VV67 1664 aaKnown RBP19.11■□□□□ 0.65
TMEM253-203ENST00000554329 RAPGEF6Q8TEU7 1601 aa19.11■□□□□ 0.65
TMEM253-203ENST00000554329 EPRSP07814 1512 aaKnown RBP19.11■□□□□ 0.65
TMEM253-203ENST00000554329 KCNH8Q96L42 1107 aa19.1■□□□□ 0.65
TMEM253-203ENST00000554329 WDR7Q9Y4E6 1490 aa19.09■□□□□ 0.65
TMEM253-203ENST00000554329 ATP10BO94823 1461 aa19.07■□□□□ 0.64
TMEM253-203ENST00000554329 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.05■□□□□ 0.64
TMEM253-203ENST00000554329 HNRNPUL2Q1KMD3 747 aaKnown RBP19.05■□□□□ 0.64
TMEM253-203ENST00000554329 GLI2P10070 1586 aa19.05■□□□□ 0.64
TMEM253-203ENST00000554329 EFCAB5A4FU69 1503 aa19.05■□□□□ 0.64
TMEM253-203ENST00000554329 NUP153P49790 1475 aaKnown RBP19.04■□□□□ 0.64
TMEM253-203ENST00000554329 ARHGAP35Q9NRY4 1499 aa19.04■□□□□ 0.64
TMEM253-203ENST00000554329 MAP3K4Q9Y6R4 1608 aa19.04■□□□□ 0.64
TMEM253-203ENST00000554329 KDM6BO15054 1643 aa19.03■□□□□ 0.64
TMEM253-203ENST00000554329 ATP1B4Q9UN42 357 aaPredicted RBP19■□□□□ 0.63
TMEM253-203ENST00000554329 CDK13Q14004 1512 aaKnown RBP19■□□□□ 0.63
TMEM253-203ENST00000554329 COL17A1Q9UMD9 1497 aaPredicted RBP18.95■□□□□ 0.62
TMEM253-203ENST00000554329 CFAP43Q8NDM7 1665 aa18.93■□□□□ 0.62
TMEM253-203ENST00000554329 CD109Q6YHK3 1445 aa18.92■□□□□ 0.62
TMEM253-203ENST00000554329 LRRIQ1Q96JM4 1722 aa18.92■□□□□ 0.62
TMEM253-203ENST00000554329 PCF11O94913 1555 aaKnown RBP18.89■□□□□ 0.61
TMEM253-203ENST00000554329 HECW1Q76N89 1606 aa18.88■□□□□ 0.61
TMEM253-203ENST00000554329 LOC105371045A0A1W2PR82 267 aa18.87■□□□□ 0.61
TMEM253-203ENST00000554329 ABCA9Q8IUA7 1624 aa18.86■□□□□ 0.61
TMEM253-203ENST00000554329 TEX14Q8IWB6 1497 aa18.86■□□□□ 0.61
TMEM253-203ENST00000554329 FMN1Q68DA7 1419 aa18.86■□□□□ 0.61
TMEM253-203ENST00000554329 CLIP1P30622 1438 aa18.85■□□□□ 0.61
TMEM253-203ENST00000554329 TTC37Q6PGP7 1564 aa18.84■□□□□ 0.61
TMEM253-203ENST00000554329 MAGI3Q5TCQ9 1506 aa18.84■□□□□ 0.61
TMEM253-203ENST00000554329 PLEKHD1A6NEE1 506 aa18.82■□□□□ 0.6
TMEM253-203ENST00000554329 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.81■□□□□ 0.6
TMEM253-203ENST00000554329 KIF14Q15058 1648 aa18.8■□□□□ 0.6
TMEM253-203ENST00000554329 CEP162Q5TB80 1403 aa18.76■□□□□ 0.59
TMEM253-203ENST00000554329 CASKIN1Q8WXD9 1431 aa18.74■□□□□ 0.59
TMEM253-203ENST00000554329 RAPGEF3O95398 923 aa18.73■□□□□ 0.59
TMEM253-203ENST00000554329 KDM4FA0A1W2PPD8 638 aa18.7■□□□□ 0.58
TMEM253-203ENST00000554329 FRMPD1Q5SYB0 1578 aa18.7■□□□□ 0.58
TMEM253-203ENST00000554329 FYCO1Q9BQS8 1478 aa18.69■□□□□ 0.58
TMEM253-203ENST00000554329 TROQ12816 1431 aaPredicted RBP18.68■□□□□ 0.58
TMEM253-203ENST00000554329 SENP3Q9H4L4 574 aaPredicted RBP18.68■□□□□ 0.58
TMEM253-203ENST00000554329 FANCAO15360 1455 aa18.68■□□□□ 0.58
TMEM253-203ENST00000554329 MYO5CQ9NQX4 1742 aa18.67■□□□□ 0.58
TMEM253-203ENST00000554329 ARAP3Q8WWN8 1544 aa18.67■□□□□ 0.58
TMEM253-203ENST00000554329 NEO1Q92859 1461 aa18.65■□□□□ 0.58
TMEM253-203ENST00000554329 AKNAQ7Z591 1439 aa18.65■□□□□ 0.58
TMEM253-203ENST00000554329 CCDC18Q5T9S5 1454 aa18.65■□□□□ 0.58
TMEM253-203ENST00000554329 CDK11AQ9UQ88 783 aaPredicted RBP18.64■□□□□ 0.57
TMEM253-203ENST00000554329 ADGRL1O94910 1474 aa18.64■□□□□ 0.57
TMEM253-203ENST00000554329 RICTORQ6R327 1708 aa18.63■□□□□ 0.57
TMEM253-203ENST00000554329 CDC42BPBQ9Y5S2 1711 aa18.61■□□□□ 0.57
TMEM253-203ENST00000554329 CFAP74Q9C0B2 1584 aa18.61■□□□□ 0.57
TMEM253-203ENST00000554329 PLCH2O75038 1416 aa18.61■□□□□ 0.57
TMEM253-203ENST00000554329 ARHGAP5Q13017 1502 aa18.6■□□□□ 0.57
TMEM253-203ENST00000554329 DENND4BO75064 1496 aaPredicted RBP18.58■□□□□ 0.57
TMEM253-203ENST00000554329 CDC42BPAQ5VT25 1732 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms