RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 RUSC2Q8N2Y8 1516 aa32.56■■■□□ 2.8
CPSF2-203ENST00000554290 CUL7Q14999 1698 aa32.53■■■□□ 2.8
CPSF2-203ENST00000554290 KIAA0586Q9BVV6 1533 aa32.5■■■□□ 2.79
CPSF2-203ENST00000554290 CARMIL1Q5VZK9 1371 aa32.45■■■□□ 2.78
CPSF2-203ENST00000554290 NPM1P06748 294 aaKnown RBP eCLIP32.38■■■□□ 2.77
CPSF2-203ENST00000554290 CARMIL2Q6F5E8 1435 aa32.21■■■□□ 2.75
CPSF2-203ENST00000554290 ADCY10Q96PN6 1610 aa32.21■■■□□ 2.75
CPSF2-203ENST00000554290 PTPRGP23470 1445 aa32.2■■■□□ 2.75
CPSF2-203ENST00000554290 FAM69CQ0P6D2 419 aa32.19■■■□□ 2.74
CPSF2-203ENST00000554290 MAPKBP1O60336 1514 aa32.19■■■□□ 2.74
CPSF2-203ENST00000554290 KIF13AQ9H1H9 1805 aa32.19■■■□□ 2.74
CPSF2-203ENST00000554290 ABCC10Q5T3U5 1492 aa32.16■■■□□ 2.74
CPSF2-203ENST00000554290 IQGAP2Q13576 1575 aa32.16■■■□□ 2.74
CPSF2-203ENST00000554290 TNIKQ9UKE5 1360 aa32.14■■■□□ 2.74
CPSF2-203ENST00000554290 RAPGEF2Q9Y4G8 1499 aa32.14■■■□□ 2.74
CPSF2-203ENST00000554290 TTBK1Q5TCY1 1321 aaPredicted RBP32.13■■■□□ 2.73
CPSF2-203ENST00000554290 AEBP2Q6ZN18 517 aaPredicted RBP32.07■■■□□ 2.72
CPSF2-203ENST00000554290 DIP2BQ9P265 1576 aa32.04■■■□□ 2.72
CPSF2-203ENST00000554290 DISP1Q96F81 1524 aa32■■■□□ 2.71
CPSF2-203ENST00000554290 ABCC2Q92887 1545 aa31.98■■■□□ 2.71
CPSF2-203ENST00000554290 UGGT2Q9NYU1 1516 aa31.96■■■□□ 2.71
CPSF2-203ENST00000554290 UACAQ9BZF9 1416 aa31.94■■■□□ 2.7
CPSF2-203ENST00000554290 UHRF1BP1LA0JNW5 1464 aa31.94■■■□□ 2.7
CPSF2-203ENST00000554290 PLB1Q6P1J6 1458 aa31.87■■■□□ 2.69
CPSF2-203ENST00000554290 ASXL2Q76L83 1435 aa31.87■■■□□ 2.69
CPSF2-203ENST00000554290 KIAA0556O60303 1618 aa31.85■■■□□ 2.69
CPSF2-203ENST00000554290 PRXQ9BXM0 1461 aa31.81■■■□□ 2.68
CPSF2-203ENST00000554290 KDM5BQ9UGL1 1544 aa31.79■■■□□ 2.68
CPSF2-203ENST00000554290 CTTNBP2Q8WZ74 1663 aa31.78■■■□□ 2.68
CPSF2-203ENST00000554290 GOLGA3Q08378 1498 aa31.78■■■□□ 2.68
CPSF2-203ENST00000554290 TSPOAP1O95153 1857 aa31.77■■■□□ 2.68
CPSF2-203ENST00000554290 KDM6BO15054 1643 aa31.76■■■□□ 2.67
CPSF2-203ENST00000554290 GLI2P10070 1586 aa31.74■■■□□ 2.67
CPSF2-203ENST00000554290 ZCCHC11Q5TAX3 1644 aaKnown RBP31.67■■■□□ 2.66
CPSF2-203ENST00000554290 CSRNP3Q8WYN3 585 aa31.66■■■□□ 2.66
CPSF2-203ENST00000554290 EPRSP07814 1512 aaKnown RBP31.65■■■□□ 2.66
CPSF2-203ENST00000554290 FAM9AQ8IZU1 332 aaPredicted RBP31.63■■■□□ 2.65
CPSF2-203ENST00000554290 WDR7Q9Y4E6 1490 aa31.57■■■□□ 2.64
CPSF2-203ENST00000554290 PPRC1Q5VV67 1664 aaKnown RBP31.56■■■□□ 2.64
CPSF2-203ENST00000554290 ABCA8O94911 1581 aa31.56■■■□□ 2.64
CPSF2-203ENST00000554290 MAP3K4Q9Y6R4 1608 aa31.53■■■□□ 2.64
CPSF2-203ENST00000554290 EEA1Q15075 1411 aa31.53■■■□□ 2.64
CPSF2-203ENST00000554290 TEX14Q8IWB6 1497 aa31.52■■■□□ 2.64
CPSF2-203ENST00000554290 P3H3Q8IVL6 736 aa31.5■■■□□ 2.63
CPSF2-203ENST00000554290 KCNH8Q96L42 1107 aa31.47■■■□□ 2.63
CPSF2-203ENST00000554290 KDM4FA0A1W2PPD8 638 aa31.43■■■□□ 2.62
CPSF2-203ENST00000554290 COL17A1Q9UMD9 1497 aaPredicted RBP31.41■■■□□ 2.62
CPSF2-203ENST00000554290 CD109Q6YHK3 1445 aa31.4■■■□□ 2.62
CPSF2-203ENST00000554290 SAMD9Q5K651 1589 aa31.36■■■□□ 2.61
CPSF2-203ENST00000554290 ARID3CA6NKF2 412 aa31.35■■■□□ 2.61
CPSF2-203ENST00000554290 MAGI3Q5TCQ9 1506 aa31.34■■■□□ 2.61
CPSF2-203ENST00000554290 ATP10BO94823 1461 aa31.33■■■□□ 2.61
CPSF2-203ENST00000554290 CFAP43Q8NDM7 1665 aa31.33■■■□□ 2.61
CPSF2-203ENST00000554290 RANGAP1P46060 587 aaPredicted RBP31.31■■■□□ 2.6
CPSF2-203ENST00000554290 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.24■■■□□ 2.59
CPSF2-203ENST00000554290 HNRNPUL2Q1KMD3 747 aaKnown RBP31.24■■■□□ 2.59
CPSF2-203ENST00000554290 RAPGEF6Q8TEU7 1601 aa31.24■■■□□ 2.59
CPSF2-203ENST00000554290 KIF21BO75037 1637 aa31.2■■■□□ 2.58
CPSF2-203ENST00000554290 FHOD3Q2V2M9 1422 aa31.19■■■□□ 2.58
CPSF2-203ENST00000554290 ADGRL1O94910 1474 aa31.19■■■□□ 2.58
CPSF2-203ENST00000554290 NUP153P49790 1475 aaKnown RBP31.14■■■□□ 2.57
CPSF2-203ENST00000554290 CHIC1Q5VXU3 224 aa31.13■■■□□ 2.57
CPSF2-203ENST00000554290 PHLDB1Q86UU1 1377 aa31.12■■■□□ 2.57
CPSF2-203ENST00000554290 EFCAB5A4FU69 1503 aa31.11■■■□□ 2.57
CPSF2-203ENST00000554290 ABCA9Q8IUA7 1624 aa31.11■■■□□ 2.57
CPSF2-203ENST00000554290 ARAP3Q8WWN8 1544 aa31.1■■■□□ 2.57
CPSF2-203ENST00000554290 PLEKHD1A6NEE1 506 aa31.07■■■□□ 2.56
CPSF2-203ENST00000554290 UBTFP17480 764 aaKnown RBP31.07■■■□□ 2.56
CPSF2-203ENST00000554290 EHMT2Q96KQ7 1210 aa31.03■■■□□ 2.56
CPSF2-203ENST00000554290 NEO1Q92859 1461 aa31.01■■■□□ 2.55
CPSF2-203ENST00000554290 RAPGEF3O95398 923 aa30.93■■■□□ 2.54
CPSF2-203ENST00000554290 FMN1Q68DA7 1419 aa30.89■■■□□ 2.53
CPSF2-203ENST00000554290 ATP1B4Q9UN42 357 aaPredicted RBP30.86■■■□□ 2.53
CPSF2-203ENST00000554290 CDK13Q14004 1512 aaKnown RBP30.83■■■□□ 2.53
CPSF2-203ENST00000554290 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.83■■■□□ 2.536e-6■■■■■ 38.2
CPSF2-203ENST00000554290 ARHGAP35Q9NRY4 1499 aa30.83■■■□□ 2.53
CPSF2-203ENST00000554290 AKNAQ7Z591 1439 aa30.81■■■□□ 2.52
CPSF2-203ENST00000554290 FANCAO15360 1455 aa30.8■■■□□ 2.52
CPSF2-203ENST00000554290 DENND4BO75064 1496 aaPredicted RBP30.79■■■□□ 2.52
CPSF2-203ENST00000554290 CDK11AQ9UQ88 783 aaPredicted RBP30.79■■■□□ 2.52
CPSF2-203ENST00000554290 HECW1Q76N89 1606 aa30.77■■■□□ 2.52
CPSF2-203ENST00000554290 FRMPD1Q5SYB0 1578 aa30.76■■■□□ 2.52
CPSF2-203ENST00000554290 CFAP74Q9C0B2 1584 aa30.76■■■□□ 2.52
CPSF2-203ENST00000554290 TTC37Q6PGP7 1564 aa30.75■■■□□ 2.51
CPSF2-203ENST00000554290 ARID4BQ4LE39 1312 aaPredicted RBP30.73■■■□□ 2.51
CPSF2-203ENST00000554290 HECW2Q9P2P5 1572 aa30.7■■■□□ 2.5
CPSF2-203ENST00000554290 PLCH2O75038 1416 aa30.69■■■□□ 2.5
CPSF2-203ENST00000554290 RICTORQ6R327 1708 aa30.65■■■□□ 2.5
CPSF2-203ENST00000554290 ADAMTSL3P82987 1691 aa30.63■■■□□ 2.49
CPSF2-203ENST00000554290 EFCAB2Q5VUJ9 269 aa30.63■■■□□ 2.49
CPSF2-203ENST00000554290 ARHGEF40Q8TER5 1519 aa30.63■■■□□ 2.49
CPSF2-203ENST00000554290 SCAPERQ9BY12 1400 aa30.61■■■□□ 2.49
CPSF2-203ENST00000554290 PTPRMP28827 1452 aa30.61■■■□□ 2.49
CPSF2-203ENST00000554290 CLIP1P30622 1438 aa30.6■■■□□ 2.49
CPSF2-203ENST00000554290 TROQ12816 1431 aaPredicted RBP30.6■■■□□ 2.49
CPSF2-203ENST00000554290 ZMYM4Q5VZL5 1548 aa30.59■■■□□ 2.49
CPSF2-203ENST00000554290 BCORL1Q5H9F3 1711 aa30.59■■■□□ 2.49
CPSF2-203ENST00000554290 MAGI2Q86UL8 1455 aa30.58■■■□□ 2.49
CPSF2-203ENST00000554290 KIF14Q15058 1648 aa30.56■■■□□ 2.48
CPSF2-203ENST00000554290 ZFYVE16Q7Z3T8 1539 aa30.55■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms