RNA–Protein interactions for RNA: ENST00000554178.1

PTPN21-204, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 3

Gene PTPN21, Length 822 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-204ENST00000554178 BIVM-ERCC5R4GMW8 1640 aa17.78■□□□□ 0.44
PTPN21-204ENST00000554178 MAPK8IP2Q13387 824 aaPredicted RBP17.77■□□□□ 0.44
PTPN21-204ENST00000554178 SHROOM2Q13796 1616 aa17.76■□□□□ 0.43
PTPN21-204ENST00000554178 TOP2BQ02880 1626 aa17.72■□□□□ 0.43
PTPN21-204ENST00000554178 NUP160Q12769 1436 aa17.69■□□□□ 0.42
PTPN21-204ENST00000554178 WRNQ14191 1432 aaPredicted RBP eCLIP17.67■□□□□ 0.42
PTPN21-204ENST00000554178 SUPT5HO00267 1087 aaKnown RBP17.66■□□□□ 0.42
PTPN21-204ENST00000554178 RUSC2Q8N2Y8 1516 aa17.63■□□□□ 0.41
PTPN21-204ENST00000554178 FHAD1B1AJZ9 1412 aa17.62■□□□□ 0.41
PTPN21-204ENST00000554178 ERICH3Q5RHP9 1530 aa17.62■□□□□ 0.41
PTPN21-204ENST00000554178 TSPOAP1O95153 1857 aa17.58■□□□□ 0.41
PTPN21-204ENST00000554178 PRG4Q92954 1404 aaPredicted RBP17.56■□□□□ 0.4
PTPN21-204ENST00000554178 ADCY10Q96PN6 1610 aa17.54■□□□□ 0.4
PTPN21-204ENST00000554178 DIP2BQ9P265 1576 aa17.52■□□□□ 0.39
PTPN21-204ENST00000554178 DMRT2Q9Y5R5 561 aa17.51■□□□□ 0.39
PTPN21-204ENST00000554178 SCAF1Q9H7N4 1312 aaKnown RBP17.47■□□□□ 0.39
PTPN21-204ENST00000554178 KDM6BO15054 1643 aa17.45■□□□□ 0.38
PTPN21-204ENST00000554178 MAPKBP1O60336 1514 aa17.45■□□□□ 0.38
PTPN21-204ENST00000554178 ABCC10Q5T3U5 1492 aa17.43■□□□□ 0.38
PTPN21-204ENST00000554178 CUL7Q14999 1698 aa17.42■□□□□ 0.38
PTPN21-204ENST00000554178 JPH4Q96JJ6 628 aa17.41■□□□□ 0.38
PTPN21-204ENST00000554178 FAM69CQ0P6D2 419 aa17.39■□□□□ 0.37
PTPN21-204ENST00000554178 PPRC1Q5VV67 1664 aaKnown RBP17.32■□□□□ 0.36
PTPN21-204ENST00000554178 TTBK1Q5TCY1 1321 aaPredicted RBP17.32■□□□□ 0.36
PTPN21-204ENST00000554178 KIAA0586Q9BVV6 1533 aa17.31■□□□□ 0.36
PTPN21-204ENST00000554178 NPM1P06748 294 aaKnown RBP eCLIP17.31■□□□□ 0.36
PTPN21-204ENST00000554178 PPP4R3CPQ6ZMV5 832 aa17.3■□□□□ 0.36
PTPN21-204ENST00000554178 KIF27Q86VH2 1401 aa17.26■□□□□ 0.35
PTPN21-204ENST00000554178 IQGAP2Q13576 1575 aa17.25■□□□□ 0.35
PTPN21-204ENST00000554178 KDM4FA0A1W2PPD8 638 aa17.22■□□□□ 0.35
PTPN21-204ENST00000554178 IGF1RP08069 1367 aa17.22■□□□□ 0.35
PTPN21-204ENST00000554178 ABCC2Q92887 1545 aa17.21■□□□□ 0.35
PTPN21-204ENST00000554178 ZCCHC11Q5TAX3 1644 aaKnown RBP17.19■□□□□ 0.34
PTPN21-204ENST00000554178 PTPRGP23470 1445 aa17.19■□□□□ 0.34
PTPN21-204ENST00000554178 ASXL2Q76L83 1435 aa17.18■□□□□ 0.34
PTPN21-204ENST00000554178 MAP3K4Q9Y6R4 1608 aa17.17■□□□□ 0.34
PTPN21-204ENST00000554178 ADGRL1O94910 1474 aa17.15■□□□□ 0.34
PTPN21-204ENST00000554178 GLI2P10070 1586 aa17.15■□□□□ 0.34
PTPN21-204ENST00000554178 CARMIL1Q5VZK9 1371 aa17.15■□□□□ 0.34
PTPN21-204ENST00000554178 TNIKQ9UKE5 1360 aa17.14■□□□□ 0.33
PTPN21-204ENST00000554178 CTTNBP2Q8WZ74 1663 aa17.13■□□□□ 0.33
PTPN21-204ENST00000554178 CARMIL2Q6F5E8 1435 aa17.13■□□□□ 0.33
PTPN21-204ENST00000554178 DISP1Q96F81 1524 aa17.13■□□□□ 0.33
PTPN21-204ENST00000554178 KIAA0556O60303 1618 aa17.13■□□□□ 0.33
PTPN21-204ENST00000554178 PLB1Q6P1J6 1458 aa17.11■□□□□ 0.33
PTPN21-204ENST00000554178 UHRF1BP1LA0JNW5 1464 aa17.08■□□□□ 0.32
PTPN21-204ENST00000554178 EPRSP07814 1512 aaKnown RBP17.07■□□□□ 0.32
PTPN21-204ENST00000554178 UACAQ9BZF9 1416 aa17.07■□□□□ 0.32
PTPN21-204ENST00000554178 COL17A1Q9UMD9 1497 aaPredicted RBP17.06■□□□□ 0.32
PTPN21-204ENST00000554178 HECW2Q9P2P5 1572 aa17.06■□□□□ 0.32
PTPN21-204ENST00000554178 UGGT2Q9NYU1 1516 aa17.05■□□□□ 0.32
PTPN21-204ENST00000554178 KDM5BQ9UGL1 1544 aa17.04■□□□□ 0.32
PTPN21-204ENST00000554178 KIF21BO75037 1637 aa17.01■□□□□ 0.31
PTPN21-204ENST00000554178 TEX14Q8IWB6 1497 aa17■□□□□ 0.31
PTPN21-204ENST00000554178 RAPGEF2Q9Y4G8 1499 aa17■□□□□ 0.31
PTPN21-204ENST00000554178 ILDR1Q86SU0 546 aaPredicted RBP17■□□□□ 0.31
PTPN21-204ENST00000554178 CFAP43Q8NDM7 1665 aa17■□□□□ 0.31
PTPN21-204ENST00000554178 WDR7Q9Y4E6 1490 aa16.98■□□□□ 0.31
PTPN21-204ENST00000554178 ABCA8O94911 1581 aa16.93■□□□□ 0.3
PTPN21-204ENST00000554178 CNKSR2Q8WXI2 1034 aa16.91■□□□□ 0.3
PTPN21-204ENST00000554178 HOXD11P31277 338 aaPredicted RBP16.87■□□□□ 0.29
PTPN21-204ENST00000554178 CD109Q6YHK3 1445 aa16.85■□□□□ 0.29
PTPN21-204ENST00000554178 DCAF8L1A6NGE4 600 aa16.84■□□□□ 0.29
PTPN21-204ENST00000554178 ARID3CA6NKF2 412 aa16.84■□□□□ 0.29
PTPN21-204ENST00000554178 GOLGA3Q08378 1498 aa16.84■□□□□ 0.29
PTPN21-204ENST00000554178 MAGI3Q5TCQ9 1506 aa16.84■□□□□ 0.29
PTPN21-204ENST00000554178 KCNH8Q96L42 1107 aa16.83■□□□□ 0.28
PTPN21-204ENST00000554178 ABCA9Q8IUA7 1624 aa16.78■□□□□ 0.28
PTPN21-204ENST00000554178 ADAMTSL3P82987 1691 aa16.76■□□□□ 0.27
PTPN21-204ENST00000554178 FRMPD1Q5SYB0 1578 aa16.76■□□□□ 0.27
PTPN21-204ENST00000554178 RAPGEF6Q8TEU7 1601 aa16.75■□□□□ 0.27
PTPN21-204ENST00000554178 MADDQ8WXG6 1647 aa16.74■□□□□ 0.27
PTPN21-204ENST00000554178 SAMD9Q5K651 1589 aa16.74■□□□□ 0.27
PTPN21-204ENST00000554178 RNF216Q9NWF9 866 aaPredicted RBP16.74■□□□□ 0.27
PTPN21-204ENST00000554178 PRXQ9BXM0 1461 aa16.73■□□□□ 0.27
PTPN21-204ENST00000554178 BCORL1Q5H9F3 1711 aa16.73■□□□□ 0.27
PTPN21-204ENST00000554178 P3H3Q8IVL6 736 aa16.73■□□□□ 0.27
PTPN21-204ENST00000554178 RIMS1Q86UR5 1692 aaKnown RBP16.72■□□□□ 0.27
PTPN21-204ENST00000554178 ARAP3Q8WWN8 1544 aa16.71■□□□□ 0.27
PTPN21-204ENST00000554178 ATP10BO94823 1461 aa16.7■□□□□ 0.26
PTPN21-204ENST00000554178 RICTORQ6R327 1708 aa16.67■□□□□ 0.26
PTPN21-204ENST00000554178 PTPRMP28827 1452 aa16.67■□□□□ 0.26
PTPN21-204ENST00000554178 ARHGEF40Q8TER5 1519 aa16.66■□□□□ 0.26
PTPN21-204ENST00000554178 SIGLEC1Q9BZZ2 1709 aa16.66■□□□□ 0.26
PTPN21-204ENST00000554178 PCF11O94913 1555 aaKnown RBP16.63■□□□□ 0.25
PTPN21-204ENST00000554178 RAPGEF3O95398 923 aa16.62■□□□□ 0.25
PTPN21-204ENST00000554178 RANGAP1P46060 587 aaPredicted RBP16.62■□□□□ 0.25
PTPN21-204ENST00000554178 TTC37Q6PGP7 1564 aa16.62■□□□□ 0.25
PTPN21-204ENST00000554178 NUP153P49790 1475 aaKnown RBP16.61■□□□□ 0.25
PTPN21-204ENST00000554178 NEO1Q92859 1461 aa16.61■□□□□ 0.25
PTPN21-204ENST00000554178 FER1L4A9Z1Z3 1794 aa16.6■□□□□ 0.25
PTPN21-204ENST00000554178 FHOD3Q2V2M9 1422 aa16.6■□□□□ 0.25
PTPN21-204ENST00000554178 CFAP74Q9C0B2 1584 aa16.6■□□□□ 0.25
PTPN21-204ENST00000554178 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.59■□□□□ 0.25
PTPN21-204ENST00000554178 HNRNPUL2Q1KMD3 747 aaKnown RBP16.59■□□□□ 0.25
PTPN21-204ENST00000554178 LMTK3Q96Q04 1460 aa16.58■□□□□ 0.24
PTPN21-204ENST00000554178 ARID4BQ4LE39 1312 aaPredicted RBP16.57■□□□□ 0.24
PTPN21-204ENST00000554178 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.55■□□□□ 0.24
PTPN21-204ENST00000554178 NCBP3Q53F19 620 aaKnown RBP16.53■□□□□ 0.24
PTPN21-204ENST00000554178 CDK13Q14004 1512 aaKnown RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms