RNA–Protein interactions for RNA: ENST00000553999.5

HIF1A-206, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-206ENST00000553999 PRG4Q92954 1404 aaPredicted RBP35.3■■■■□ 3.24
HIF1A-206ENST00000553999 CARMIL1Q5VZK9 1371 aa35.28■■■■□ 3.24
HIF1A-206ENST00000553999 JPH4Q96JJ6 628 aa35.26■■■■□ 3.24
HIF1A-206ENST00000553999 KIAA0586Q9BVV6 1533 aa35.15■■■■□ 3.22
HIF1A-206ENST00000553999 TTBK1Q5TCY1 1321 aaPredicted RBP35.05■■■■□ 3.2
HIF1A-206ENST00000553999 RAPGEF2Q9Y4G8 1499 aa35.01■■■■□ 3.19
HIF1A-206ENST00000553999 IQGAP2Q13576 1575 aa34.96■■■■□ 3.19
HIF1A-206ENST00000553999 ADCY10Q96PN6 1610 aa34.81■■■■□ 3.16
HIF1A-206ENST00000553999 CARMIL2Q6F5E8 1435 aa34.81■■■■□ 3.16
HIF1A-206ENST00000553999 PTPRGP23470 1445 aa34.78■■■■□ 3.16
HIF1A-206ENST00000553999 FAM9AQ8IZU1 332 aaPredicted RBP34.76■■■■□ 3.16
HIF1A-206ENST00000553999 PRXQ9BXM0 1461 aa34.75■■■■□ 3.15
HIF1A-206ENST00000553999 DISP1Q96F81 1524 aa34.74■■■■□ 3.15
HIF1A-206ENST00000553999 TNIKQ9UKE5 1360 aa34.74■■■■□ 3.15
HIF1A-206ENST00000553999 NPM1P06748 294 aaKnown RBP eCLIP34.73■■■■□ 3.15
HIF1A-206ENST00000553999 CTTNBP2Q8WZ74 1663 aa34.73■■■■□ 3.15
HIF1A-206ENST00000553999 UGGT2Q9NYU1 1516 aa34.69■■■■□ 3.14
HIF1A-206ENST00000553999 CSRNP3Q8WYN3 585 aa34.66■■■■□ 3.14
HIF1A-206ENST00000553999 KIAA0556O60303 1618 aa34.65■■■■□ 3.14
HIF1A-206ENST00000553999 KIF13AQ9H1H9 1805 aa34.58■■■■□ 3.13
HIF1A-206ENST00000553999 CHIC1Q5VXU3 224 aa34.57■■■■□ 3.12
HIF1A-206ENST00000553999 MAPKBP1O60336 1514 aa34.55■■■■□ 3.12
HIF1A-206ENST00000553999 FAM69CQ0P6D2 419 aa34.54■■■■□ 3.12
HIF1A-206ENST00000553999 EEA1Q15075 1411 aa34.52■■■■□ 3.12
HIF1A-206ENST00000553999 UACAQ9BZF9 1416 aa34.52■■■■□ 3.12
HIF1A-206ENST00000553999 EHMT2Q96KQ7 1210 aa34.51■■■■□ 3.12
HIF1A-206ENST00000553999 RANGAP1P46060 587 aaPredicted RBP34.49■■■■□ 3.11
HIF1A-206ENST00000553999 ABCC10Q5T3U5 1492 aa34.49■■■■□ 3.11
HIF1A-206ENST00000553999 ABCC2Q92887 1545 aa34.49■■■■□ 3.11
HIF1A-206ENST00000553999 DIP2BQ9P265 1576 aa34.48■■■■□ 3.11
HIF1A-206ENST00000553999 P3H3Q8IVL6 736 aa34.47■■■■□ 3.11
HIF1A-206ENST00000553999 GOLGA3Q08378 1498 aa34.46■■■■□ 3.11
HIF1A-206ENST00000553999 UHRF1BP1LA0JNW5 1464 aa34.42■■■■□ 3.1
HIF1A-206ENST00000553999 PLB1Q6P1J6 1458 aa34.4■■■■□ 3.1
HIF1A-206ENST00000553999 ASXL2Q76L83 1435 aa34.38■■■■□ 3.09
HIF1A-206ENST00000553999 ZCCHC11Q5TAX3 1644 aaKnown RBP34.33■■■■□ 3.09
HIF1A-206ENST00000553999 TSPOAP1O95153 1857 aa34.31■■■■□ 3.08
HIF1A-206ENST00000553999 ARID3CA6NKF2 412 aa34.3■■■■□ 3.08
HIF1A-206ENST00000553999 KDM5BQ9UGL1 1544 aa34.3■■■■□ 3.08
HIF1A-206ENST00000553999 KIF21BO75037 1637 aa34.28■■■■□ 3.08
HIF1A-206ENST00000553999 ABCA8O94911 1581 aa34.25■■■■□ 3.07
HIF1A-206ENST00000553999 SAMD9Q5K651 1589 aa34.23■■■■□ 3.07
HIF1A-206ENST00000553999 FHOD3Q2V2M9 1422 aa34.16■■■■□ 3.06
HIF1A-206ENST00000553999 UBTFP17480 764 aaKnown RBP34.15■■■■□ 3.06
HIF1A-206ENST00000553999 EPRSP07814 1512 aaKnown RBP34.14■■■■□ 3.06
HIF1A-206ENST00000553999 WDR7Q9Y4E6 1490 aa34.11■■■■□ 3.05
HIF1A-206ENST00000553999 GLI2P10070 1586 aa34.09■■■■□ 3.05
HIF1A-206ENST00000553999 KCNH8Q96L42 1107 aa34.08■■■■□ 3.05
HIF1A-206ENST00000553999 KDM6BO15054 1643 aa34.07■■■■□ 3.04
HIF1A-206ENST00000553999 PPRC1Q5VV67 1664 aaKnown RBP34.04■■■■□ 3.04
HIF1A-206ENST00000553999 RAPGEF6Q8TEU7 1601 aa34.03■■■■□ 3.04
HIF1A-206ENST00000553999 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34■■■■□ 3.03
HIF1A-206ENST00000553999 HNRNPUL2Q1KMD3 747 aaKnown RBP34■■■■□ 3.03
HIF1A-206ENST00000553999 MAP3K4Q9Y6R4 1608 aa33.99■■■■□ 3.03
HIF1A-206ENST00000553999 ATP10BO94823 1461 aa33.99■■■■□ 3.03
HIF1A-206ENST00000553999 EFCAB5A4FU69 1503 aa33.96■■■■□ 3.03
HIF1A-206ENST00000553999 NUP153P49790 1475 aaKnown RBP33.91■■■■□ 3.02
HIF1A-206ENST00000553999 TEX14Q8IWB6 1497 aa33.84■■■■□ 3.01
HIF1A-206ENST00000553999 CD109Q6YHK3 1445 aa33.84■■■■□ 3.01
HIF1A-206ENST00000553999 ARHGAP35Q9NRY4 1499 aa33.82■■■■□ 3.01
HIF1A-206ENST00000553999 ATP1B4Q9UN42 357 aaPredicted RBP33.82■■■■□ 3
HIF1A-206ENST00000553999 AEBP2Q6ZN18 517 aaPredicted RBP33.81■■■■□ 3
HIF1A-206ENST00000553999 CFAP43Q8NDM7 1665 aa33.8■■■■□ 3
HIF1A-206ENST00000553999 COL17A1Q9UMD9 1497 aaPredicted RBP33.8■■■■□ 3
HIF1A-206ENST00000553999 CDK13Q14004 1512 aaKnown RBP33.74■■■□□ 2.99
HIF1A-206ENST00000553999 MAGI3Q5TCQ9 1506 aa33.7■■■□□ 2.99
HIF1A-206ENST00000553999 FMN1Q68DA7 1419 aa33.66■■■□□ 2.98
HIF1A-206ENST00000553999 ABCA9Q8IUA7 1624 aa33.66■■■□□ 2.98
HIF1A-206ENST00000553999 PLEKHD1A6NEE1 506 aa33.64■■■□□ 2.98
HIF1A-206ENST00000553999 HECW1Q76N89 1606 aa33.63■■■□□ 2.97
HIF1A-206ENST00000553999 CLIP1P30622 1438 aa33.52■■■□□ 2.96
HIF1A-206ENST00000553999 PCF11O94913 1555 aaKnown RBP33.51■■■□□ 2.96
HIF1A-206ENST00000553999 TTC37Q6PGP7 1564 aa33.51■■■□□ 2.96
HIF1A-206ENST00000553999 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.5■■■□□ 2.95
HIF1A-206ENST00000553999 KDM4FA0A1W2PPD8 638 aa33.48■■■□□ 2.95
HIF1A-206ENST00000553999 LRRIQ1Q96JM4 1722 aa33.47■■■□□ 2.95
HIF1A-206ENST00000553999 RAPGEF3O95398 923 aa33.42■■■□□ 2.94
HIF1A-206ENST00000553999 ARAP3Q8WWN8 1544 aa33.42■■■□□ 2.94
HIF1A-206ENST00000553999 NEO1Q92859 1461 aa33.4■■■□□ 2.94
HIF1A-206ENST00000553999 ADGRL1O94910 1474 aa33.39■■■□□ 2.94
HIF1A-206ENST00000553999 KIF14Q15058 1648 aa33.38■■■□□ 2.93
HIF1A-206ENST00000553999 CASKIN1Q8WXD9 1431 aa33.37■■■□□ 2.93
HIF1A-206ENST00000553999 CDK11AQ9UQ88 783 aaPredicted RBP33.36■■■□□ 2.93
HIF1A-206ENST00000553999 FANCAO15360 1455 aa33.36■■■□□ 2.93
HIF1A-206ENST00000553999 TROQ12816 1431 aaPredicted RBP33.32■■■□□ 2.92
HIF1A-206ENST00000553999 PHLDB1Q86UU1 1377 aa33.32■■■□□ 2.92
HIF1A-206ENST00000553999 FRMPD1Q5SYB0 1578 aa33.31■■■□□ 2.92
HIF1A-206ENST00000553999 AKNAQ7Z591 1439 aa33.31■■■□□ 2.92
HIF1A-206ENST00000553999 LOC105371045A0A1W2PR82 267 aa33.29■■■□□ 2.92
HIF1A-206ENST00000553999 FYCO1Q9BQS8 1478 aa33.28■■■□□ 2.92
HIF1A-206ENST00000553999 CEP162Q5TB80 1403 aa33.28■■■□□ 2.92
HIF1A-206ENST00000553999 CFAP74Q9C0B2 1584 aa33.27■■■□□ 2.92
HIF1A-206ENST00000553999 CCDC18Q5T9S5 1454 aa33.27■■■□□ 2.92
HIF1A-206ENST00000553999 DENND4BO75064 1496 aaPredicted RBP33.25■■■□□ 2.91
HIF1A-206ENST00000553999 MYO5CQ9NQX4 1742 aa33.23■■■□□ 2.91
HIF1A-206ENST00000553999 PLCH2O75038 1416 aa33.23■■■□□ 2.91
HIF1A-206ENST00000553999 ARHGAP5Q13017 1502 aa33.18■■■□□ 2.9
HIF1A-206ENST00000553999 RICTORQ6R327 1708 aa33.17■■■□□ 2.9
HIF1A-206ENST00000553999 SCAPERQ9BY12 1400 aa33.15■■■□□ 2.9
HIF1A-206ENST00000553999 EFCAB2Q5VUJ9 269 aa33.13■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms